RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 Q8N9L7 120 aa11.91□□□□□ -0.5
TPM1-204ENST00000334895 K7EQZ3 153 aa11.9□□□□□ -0.5
TPM1-204ENST00000334895 A0A1B0GVX0 72 aa11.89□□□□□ -0.51
TPM1-204ENST00000334895 ATP5EP2Q5VTU8 51 aa11.88□□□□□ -0.51
TPM1-204ENST00000334895 PRR15Q8IV56 129 aa11.88□□□□□ -0.51
TPM1-204ENST00000334895 IGHV6-1A0A0B4J1U7 121 aa11.86□□□□□ -0.51
TPM1-204ENST00000334895 NDUFB1O75438 58 aa11.86□□□□□ -0.51
TPM1-204ENST00000334895 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
TPM1-204ENST00000334895 KRTAP13-3Q3SY46 172 aa11.86□□□□□ -0.51
TPM1-204ENST00000334895 LPAP08519 4548 aa11.85□□□□□ -0.51
TPM1-204ENST00000334895 C9orf92A6NGG3 77 aa11.83□□□□□ -0.52
TPM1-204ENST00000334895 TPRXLQ17RH7 258 aa11.81□□□□□ -0.52
TPM1-204ENST00000334895 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
TPM1-204ENST00000334895 C8orf17Q9NRJ1 99 aa11.78□□□□□ -0.52
TPM1-204ENST00000334895 LRP2P98164 4655 aa11.78□□□□□ -0.52
TPM1-204ENST00000334895 LINC00313P59037 77 aa11.78□□□□□ -0.52
TPM1-204ENST00000334895 UBR4Q5T4S7 5183 aa11.77□□□□□ -0.53
TPM1-204ENST00000334895 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
TPM1-204ENST00000334895 C8orf87E5RJ46 101 aa11.77□□□□□ -0.53
TPM1-204ENST00000334895 KRTAP16-1A8MUX0 517 aa11.75□□□□□ -0.53
TPM1-204ENST00000334895 HIST1H4AP62805 103 aaKnown RBP11.73□□□□□ -0.53
TPM1-204ENST00000334895 A0A087WVE0 104 aa11.71□□□□□ -0.54
TPM1-204ENST00000334895 XP32Q5T750 250 aa11.69□□□□□ -0.54
TPM1-204ENST00000334895 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
TPM1-204ENST00000334895 HCG22E2RYF7 251 aa11.68□□□□□ -0.54
TPM1-204ENST00000334895 hDV103S1A0JD37 113 aa11.66□□□□□ -0.54
TPM1-204ENST00000334895 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
TPM1-204ENST00000334895 TMEM254Q8TBM7 123 aa11.64□□□□□ -0.55
TPM1-204ENST00000334895 IMUPQ9GZP8 106 aa11.64□□□□□ -0.55
TPM1-204ENST00000334895 C20orf166-AS1Q96NR2 134 aa11.61□□□□□ -0.55
TPM1-204ENST00000334895 MRPL34Q9BQ48 92 aaKnown RBP11.61□□□□□ -0.55
TPM1-204ENST00000334895 A8MUU9 505 aa11.6□□□□□ -0.55
TPM1-204ENST00000334895 Q8N9P0 234 aaPredicted RBP11.59□□□□□ -0.55
TPM1-204ENST00000334895 Q75L30 129 aa11.57□□□□□ -0.56
TPM1-204ENST00000334895 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
TPM1-204ENST00000334895 NDUFS5O43920 106 aa11.49□□□□□ -0.57
TPM1-204ENST00000334895 MUC17Q685J3 4493 aa11.48□□□□□ -0.57
TPM1-204ENST00000334895 RNF213Q63HN8 5207 aa11.48□□□□□ -0.57
TPM1-204ENST00000334895 FAM236AA0A1B0GUQ0 79 aa11.46□□□□□ -0.57
TPM1-204ENST00000334895 FAM236BA0A1B0GV22 79 aa11.46□□□□□ -0.57
TPM1-204ENST00000334895 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
TPM1-204ENST00000334895 PCOTHQ58A44 107 aa11.41□□□□□ -0.58
TPM1-204ENST00000334895 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
TPM1-204ENST00000334895 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
TPM1-204ENST00000334895 Q5W150 140 aa11.38□□□□□ -0.59
TPM1-204ENST00000334895 OCR1Q9BZK8 76 aa11.38□□□□□ -0.59
TPM1-204ENST00000334895 TP53AIP1Q9HCN2 124 aa11.37□□□□□ -0.59
TPM1-204ENST00000334895 SCGB1A1P11684 91 aa11.36□□□□□ -0.59
TPM1-204ENST00000334895 UQCRQO14949 82 aa11.3□□□□□ -0.6
TPM1-204ENST00000334895 ATOX1O00244 68 aa11.27□□□□□ -0.6
TPM1-204ENST00000334895 KRTAP4-1Q9BYQ7 146 aa11.27□□□□□ -0.61
TPM1-204ENST00000334895 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
TPM1-204ENST00000334895 MUC2Q02817 5179 aa11.23□□□□□ -0.61
TPM1-204ENST00000334895 SMIM20Q8N5G0 67 aa11.22□□□□□ -0.61
TPM1-204ENST00000334895 TRAV7A0A075B6U4 112 aa11.21□□□□□ -0.61
TPM1-204ENST00000334895 H0Y9P7 68 aa11.2□□□□□ -0.62
TPM1-204ENST00000334895 SPINK7P58062 85 aa11.16□□□□□ -0.62
TPM1-204ENST00000334895 C5orf47Q569G3 176 aa11.16□□□□□ -0.62
TPM1-204ENST00000334895 IGKV2D-30A0A075B6S6 120 aa11.14□□□□□ -0.63
TPM1-204ENST00000334895 IGKV2-30P06310 120 aa11.14□□□□□ -0.63
TPM1-204ENST00000334895 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
TPM1-204ENST00000334895 MP68P56378 58 aa11.1□□□□□ -0.63
TPM1-204ENST00000334895 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
TPM1-204ENST00000334895 LINC00208Q96KT6 92 aa11.09□□□□□ -0.63
TPM1-204ENST00000334895 C1orf64Q8NEQ6 169 aa11.08□□□□□ -0.64
TPM1-204ENST00000334895 LOC101927531A0A1B0GV80 90 aa11.06□□□□□ -0.64
TPM1-204ENST00000334895 CYP4F30PQ9H0H9 118 aa11.06□□□□□ -0.64
TPM1-204ENST00000334895 HRES1P13985 223 aa11.05□□□□□ -0.64
TPM1-204ENST00000334895 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
TPM1-204ENST00000334895 H3BPC8 53 aa11.03□□□□□ -0.64
TPM1-204ENST00000334895 COX7CP15954 63 aa11.02□□□□□ -0.64
TPM1-204ENST00000334895 A0A0U1RQV1 116 aa11.01□□□□□ -0.65
TPM1-204ENST00000334895 C20orf197Q8N268 126 aa10.98□□□□□ -0.65
TPM1-204ENST00000334895 MPLKIPQ8TAP9 179 aa10.97□□□□□ -0.65
TPM1-204ENST00000334895 SNURFQ9Y675 71 aa10.96□□□□□ -0.65
TPM1-204ENST00000334895 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
TPM1-204ENST00000334895 KRTAP19-2Q3LHN2 52 aa10.91□□□□□ -0.66
TPM1-204ENST00000334895 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
TPM1-204ENST00000334895 C4orf26Q17RF5 130 aa10.88□□□□□ -0.67
TPM1-204ENST00000334895 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
TPM1-204ENST00000334895 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
TPM1-204ENST00000334895 CYSTM1Q9H1C7 97 aa10.84□□□□□ -0.67
TPM1-204ENST00000334895 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
TPM1-204ENST00000334895 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
TPM1-204ENST00000334895 KRTAP3-1Q9BYR8 98 aa10.79□□□□□ -0.68
TPM1-204ENST00000334895 FAM236DA0A1B0GTK5 79 aa10.76□□□□□ -0.69
TPM1-204ENST00000334895 FAM236CP0DP71 79 aa10.76□□□□□ -0.69
TPM1-204ENST00000334895 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
TPM1-204ENST00000334895 H7BZZ5 65 aa10.71□□□□□ -0.69
TPM1-204ENST00000334895 NDUFC1O43677 76 aa10.68□□□□□ -0.7
TPM1-204ENST00000334895 FLGP20930 4061 aaPredicted RBP10.66□□□□□ -0.7
TPM1-204ENST00000334895 PCP4P48539 62 aa10.65□□□□□ -0.7
TPM1-204ENST00000334895 H1FX-AS1Q4G0G2 97 aa10.65□□□□□ -0.7
TPM1-204ENST00000334895 SPANXA2-OT1Q8N9U9 137 aa10.64□□□□□ -0.71
TPM1-204ENST00000334895 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
TPM1-204ENST00000334895 A8MUN3 132 aa10.61□□□□□ -0.71
TPM1-204ENST00000334895 MT1HP80294 61 aa10.58□□□□□ -0.72
TPM1-204ENST00000334895 S4R3F8 94 aa10.47□□□□□ -0.73
TPM1-204ENST00000334895 ACYP2P14621 99 aa10.46□□□□□ -0.74
TPM1-204ENST00000334895 LCA10Q71F78 164 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms