RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
NSMCE3-201ENST00000332303 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
NSMCE3-201ENST00000332303 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
NSMCE3-201ENST00000332303 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
NSMCE3-201ENST00000332303 RPS29P62273 56 aaKnown RBP9.53□□□□□ -0.88
NSMCE3-201ENST00000332303 A0A0A0MQY5 61 aa9.49□□□□□ -0.89
NSMCE3-201ENST00000332303 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
NSMCE3-201ENST00000332303 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
NSMCE3-201ENST00000332303 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
NSMCE3-201ENST00000332303 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
NSMCE3-201ENST00000332303 TENM3Q9P273 2699 aa9.46□□□□□ -0.9
NSMCE3-201ENST00000332303 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
NSMCE3-201ENST00000332303 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
NSMCE3-201ENST00000332303 DCHS2Q6V1P9 2916 aa9.4□□□□□ -0.91
NSMCE3-201ENST00000332303 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
NSMCE3-201ENST00000332303 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
NSMCE3-201ENST00000332303 CRYBG3Q68DQ2 2970 aa9.35□□□□□ -0.91
NSMCE3-201ENST00000332303 DMXL1Q9Y485 3027 aa9.35□□□□□ -0.91
NSMCE3-201ENST00000332303 H3BS24 57 aa9.35□□□□□ -0.91
NSMCE3-201ENST00000332303 MYO15AQ9UKN7 3530 aa9.34□□□□□ -0.91
NSMCE3-201ENST00000332303 NF1P21359 2839 aa9.3□□□□□ -0.92
NSMCE3-201ENST00000332303 A8MUU9 505 aa9.26□□□□□ -0.93
NSMCE3-201ENST00000332303 SPTBN5Q9NRC6 3674 aaKnown RBP9.24□□□□□ -0.93
NSMCE3-201ENST00000332303 FBN2P35556 2912 aa9.24□□□□□ -0.93
NSMCE3-201ENST00000332303 A8MU10 97 aa9.22□□□□□ -0.93
NSMCE3-201ENST00000332303 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
NSMCE3-201ENST00000332303 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
NSMCE3-201ENST00000332303 TENM1Q9UKZ4 2725 aa9.19□□□□□ -0.94
NSMCE3-201ENST00000332303 A6NN06 94 aa9.18□□□□□ -0.94
NSMCE3-201ENST00000332303 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
NSMCE3-201ENST00000332303 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
NSMCE3-201ENST00000332303 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
NSMCE3-201ENST00000332303 HRNRQ86YZ3 2850 aaPredicted RBP9.07□□□□□ -0.96
NSMCE3-201ENST00000332303 WDFY3Q8IZQ1 3526 aa9.02□□□□□ -0.97
NSMCE3-201ENST00000332303 DCHS1Q96JQ0 3298 aa8.98□□□□□ -0.97
NSMCE3-201ENST00000332303 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
NSMCE3-201ENST00000332303 TNP1P09430 55 aa8.96□□□□□ -0.98
NSMCE3-201ENST00000332303 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
NSMCE3-201ENST00000332303 RELNP78509 3460 aa8.93□□□□□ -0.98
NSMCE3-201ENST00000332303 PKD1L1Q8TDX9 2849 aa8.91□□□□□ -0.98
NSMCE3-201ENST00000332303 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
NSMCE3-201ENST00000332303 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.98
NSMCE3-201ENST00000332303 XP32Q5T750 250 aa8.86□□□□□ -0.99
NSMCE3-201ENST00000332303 ASPMQ8IZT6 3477 aa8.83□□□□□ -1
NSMCE3-201ENST00000332303 NDUFAF8A1L188 74 aa8.82□□□□□ -1
NSMCE3-201ENST00000332303 PDZD2O15018 2839 aa8.8□□□□□ -1
NSMCE3-201ENST00000332303 CELSR1Q9NYQ6 3014 aa8.79□□□□□ -1
NSMCE3-201ENST00000332303 TGP01266 2768 aa8.77□□□□□ -1.01
NSMCE3-201ENST00000332303 LAMA5O15230 3695 aa8.74□□□□□ -1.01
NSMCE3-201ENST00000332303 PP632Q6XCG6 107 aa8.73□□□□□ -1.01
NSMCE3-201ENST00000332303 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
NSMCE3-201ENST00000332303 ZFHX4Q86UP3 3567 aa8.71□□□□□ -1.02
NSMCE3-201ENST00000332303 VWFP04275 2813 aa8.7□□□□□ -1.02
NSMCE3-201ENST00000332303 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
NSMCE3-201ENST00000332303 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
NSMCE3-201ENST00000332303 MUC3AQ02505 3323 aa8.65□□□□□ -1.02
NSMCE3-201ENST00000332303 H0YAA0 97 aa8.64□□□□□ -1.03
NSMCE3-201ENST00000332303 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
NSMCE3-201ENST00000332303 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
NSMCE3-201ENST00000332303 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
NSMCE3-201ENST00000332303 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
NSMCE3-201ENST00000332303 CUBNO60494 3623 aa8.51□□□□□ -1.05
NSMCE3-201ENST00000332303 P0C880 135 aa8.5□□□□□ -1.05
NSMCE3-201ENST00000332303 CSMD1Q96PZ7 3565 aa8.5□□□□□ -1.05
NSMCE3-201ENST00000332303 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
NSMCE3-201ENST00000332303 DMDP11532 3685 aa8.45□□□□□ -1.06
NSMCE3-201ENST00000332303 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.07
NSMCE3-201ENST00000332303 SMG1Q96Q15 3661 aaKnown RBP8.38□□□□□ -1.07
NSMCE3-201ENST00000332303 SVEP1Q4LDE5 3571 aa8.31□□□□□ -1.08
NSMCE3-201ENST00000332303 OTOGQ6ZRI0 2925 aa8.28□□□□□ -1.08
NSMCE3-201ENST00000332303 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
NSMCE3-201ENST00000332303 FBN3Q75N90 2809 aa8.17□□□□□ -1.1
NSMCE3-201ENST00000332303 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
NSMCE3-201ENST00000332303 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
NSMCE3-201ENST00000332303 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
NSMCE3-201ENST00000332303 COL7A1Q02388 2944 aa8.08□□□□□ -1.12
NSMCE3-201ENST00000332303 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
NSMCE3-201ENST00000332303 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
NSMCE3-201ENST00000332303 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
NSMCE3-201ENST00000332303 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
NSMCE3-201ENST00000332303 SPENQ96T58 3664 aaKnown RBP7.93□□□□□ -1.14
NSMCE3-201ENST00000332303 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
NSMCE3-201ENST00000332303 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
NSMCE3-201ENST00000332303 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
NSMCE3-201ENST00000332303 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
NSMCE3-201ENST00000332303 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
NSMCE3-201ENST00000332303 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
NSMCE3-201ENST00000332303 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
NSMCE3-201ENST00000332303 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
NSMCE3-201ENST00000332303 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
NSMCE3-201ENST00000332303 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
NSMCE3-201ENST00000332303 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
NSMCE3-201ENST00000332303 CSMD3Q7Z407 3707 aa7.34□□□□□ -1.23
NSMCE3-201ENST00000332303 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
NSMCE3-201ENST00000332303 INE1O15225 51 aa7.21□□□□□ -1.26
NSMCE3-201ENST00000332303 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
NSMCE3-201ENST00000332303 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
NSMCE3-201ENST00000332303 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
NSMCE3-201ENST00000332303 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
NSMCE3-201ENST00000332303 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms