RNA–Protein interactions for RNA: ENST00000329468.3

NPAP1-201, Transcript of nuclear pore associated protein 1, humanhuman

APPRIS P1 BASIC

Gene NPAP1, Length 7,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1-201ENST00000329468 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
NPAP1-201ENST00000329468 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
NPAP1-201ENST00000329468 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
NPAP1-201ENST00000329468 Q5VV11 94 aa7.29□□□□□ -1.24
NPAP1-201ENST00000329468 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
NPAP1-201ENST00000329468 SPRR1BP22528 89 aa7.28□□□□□ -1.24
NPAP1-201ENST00000329468 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
NPAP1-201ENST00000329468 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
NPAP1-201ENST00000329468 Q5XG85 94 aa7.24□□□□□ -1.25
NPAP1-201ENST00000329468 RPL37P61927 97 aaKnown RBP7.23□□□□□ -1.25
NPAP1-201ENST00000329468 ROMO1P60602 79 aa7.23□□□□□ -1.25
NPAP1-201ENST00000329468 ITPR1Q14643 2758 aa7.23□□□□□ -1.25
NPAP1-201ENST00000329468 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
NPAP1-201ENST00000329468 SVEP1Q4LDE5 3571 aa7.22□□□□□ -1.25
NPAP1-201ENST00000329468 HIVEP1P15822 2718 aa7.21□□□□□ -1.25
NPAP1-201ENST00000329468 KRTAP4-16G5E9R7 235 aaPredicted RBP7.19□□□□□ -1.26
NPAP1-201ENST00000329468 NSD1Q96L73 2696 aaPredicted RBP7.17□□□□□ -1.26
NPAP1-201ENST00000329468 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
NPAP1-201ENST00000329468 A8MUU9 505 aa7.14□□□□□ -1.27
NPAP1-201ENST00000329468 STAB2Q8WWQ8 2551 aa7.14□□□□□ -1.27
NPAP1-201ENST00000329468 A8MU10 97 aa7.14□□□□□ -1.27
NPAP1-201ENST00000329468 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
NPAP1-201ENST00000329468 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
NPAP1-201ENST00000329468 CELSR2Q9HCU4 2923 aa7.11□□□□□ -1.27
NPAP1-201ENST00000329468 CUBNO60494 3623 aa7.1□□□□□ -1.27
NPAP1-201ENST00000329468 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.27
NPAP1-201ENST00000329468 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
NPAP1-201ENST00000329468 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
NPAP1-201ENST00000329468 ZFHX3Q15911 3703 aa7.05□□□□□ -1.28
NPAP1-201ENST00000329468 H3BS24 57 aa7.05□□□□□ -1.28
NPAP1-201ENST00000329468 CELSR1Q9NYQ6 3014 aa7.04□□□□□ -1.28
NPAP1-201ENST00000329468 MUC3AQ02505 3323 aa7.04□□□□□ -1.28
NPAP1-201ENST00000329468 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
NPAP1-201ENST00000329468 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
NPAP1-201ENST00000329468 FBN2P35556 2912 aa6.97□□□□□ -1.29
NPAP1-201ENST00000329468 DCHS2Q6V1P9 2916 aa6.97□□□□□ -1.29
NPAP1-201ENST00000329468 FLNCQ14315 2725 aa6.96□□□□□ -1.29
NPAP1-201ENST00000329468 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
NPAP1-201ENST00000329468 HRNRQ86YZ3 2850 aaPredicted RBP6.95□□□□□ -1.3
NPAP1-201ENST00000329468 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
NPAP1-201ENST00000329468 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
NPAP1-201ENST00000329468 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
NPAP1-201ENST00000329468 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
NPAP1-201ENST00000329468 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
NPAP1-201ENST00000329468 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
NPAP1-201ENST00000329468 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
NPAP1-201ENST00000329468 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
NPAP1-201ENST00000329468 NF1P21359 2839 aa6.8□□□□□ -1.32
NPAP1-201ENST00000329468 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
NPAP1-201ENST00000329468 TNP1P09430 55 aa6.78□□□□□ -1.32
NPAP1-201ENST00000329468 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
NPAP1-201ENST00000329468 TENM1Q9UKZ4 2725 aa6.78□□□□□ -1.32
NPAP1-201ENST00000329468 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
NPAP1-201ENST00000329468 XP32Q5T750 250 aa6.76□□□□□ -1.33
NPAP1-201ENST00000329468 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
NPAP1-201ENST00000329468 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
NPAP1-201ENST00000329468 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
NPAP1-201ENST00000329468 MXRA5Q9NR99 2828 aa6.66□□□□□ -1.34
NPAP1-201ENST00000329468 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
NPAP1-201ENST00000329468 A6NN06 94 aa6.65□□□□□ -1.35
NPAP1-201ENST00000329468 TRRAPQ9Y4A5 3859 aa6.64□□□□□ -1.35
NPAP1-201ENST00000329468 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
NPAP1-201ENST00000329468 VWFP04275 2813 aa6.6□□□□□ -1.35
NPAP1-201ENST00000329468 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
NPAP1-201ENST00000329468 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
NPAP1-201ENST00000329468 AKAP9Q99996 3911 aa6.58□□□□□ -1.36
NPAP1-201ENST00000329468 CSMD3Q7Z407 3707 aa6.57□□□□□ -1.36
NPAP1-201ENST00000329468 TPRXLQ17RH7 258 aa6.52□□□□□ -1.37
NPAP1-201ENST00000329468 H0YAA0 97 aa6.49□□□□□ -1.37
NPAP1-201ENST00000329468 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.37
NPAP1-201ENST00000329468 TGP01266 2768 aa6.46□□□□□ -1.38
NPAP1-201ENST00000329468 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
NPAP1-201ENST00000329468 P0C880 135 aa6.45□□□□□ -1.38
NPAP1-201ENST00000329468 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
NPAP1-201ENST00000329468 ZNF469Q96JG9 3925 aaPredicted RBP6.43□□□□□ -1.38
NPAP1-201ENST00000329468 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
NPAP1-201ENST00000329468 PDZD2O15018 2839 aa6.35□□□□□ -1.39
NPAP1-201ENST00000329468 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
NPAP1-201ENST00000329468 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
NPAP1-201ENST00000329468 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
NPAP1-201ENST00000329468 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
NPAP1-201ENST00000329468 COL7A1Q02388 2944 aa6.2□□□□□ -1.42
NPAP1-201ENST00000329468 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
NPAP1-201ENST00000329468 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
NPAP1-201ENST00000329468 FBN3Q75N90 2809 aa6.05□□□□□ -1.44
NPAP1-201ENST00000329468 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
NPAP1-201ENST00000329468 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
NPAP1-201ENST00000329468 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
NPAP1-201ENST00000329468 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
NPAP1-201ENST00000329468 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
NPAP1-201ENST00000329468 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
NPAP1-201ENST00000329468 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
NPAP1-201ENST00000329468 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
NPAP1-201ENST00000329468 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
NPAP1-201ENST00000329468 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
NPAP1-201ENST00000329468 KMT2AQ03164 3969 aa5.81□□□□□ -1.48
NPAP1-201ENST00000329468 LYSTQ99698 3801 aa5.78□□□□□ -1.48
NPAP1-201ENST00000329468 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
NPAP1-201ENST00000329468 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
NPAP1-201ENST00000329468 ANK2Q01484 3957 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms