RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 KRTAP9-8Q9BYQ0 159 aa11.8□□□□□ -0.52
TMEM54-201ENST00000329151 VPS25Q9BRG1 176 aa11.76□□□□□ -0.53
TMEM54-201ENST00000329151 A0A1W2PPM0 123 aa11.75□□□□□ -0.53
TMEM54-201ENST00000329151 C9JAW5 83 aa11.74□□□□□ -0.53
TMEM54-201ENST00000329151 JMJD7-PLA2G4BH0Y9G9 81 aa11.73□□□□□ -0.53
TMEM54-201ENST00000329151 USH2AO75445 5202 aa11.72□□□□□ -0.53
TMEM54-201ENST00000329151 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.71□□□□□ -0.53
TMEM54-201ENST00000329151 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
TMEM54-201ENST00000329151 KRTAP9-7A8MTY7 169 aa11.69□□□□□ -0.54
TMEM54-201ENST00000329151 DEFB116Q30KQ4 102 aa11.69□□□□□ -0.54
TMEM54-201ENST00000329151 KRTAP16-1A8MUX0 517 aa11.68□□□□□ -0.54
TMEM54-201ENST00000329151 SSPOA2VEC9 5147 aa11.66□□□□□ -0.54
TMEM54-201ENST00000329151 COL5A1-AS1Q5SY13 56 aa11.66□□□□□ -0.54
TMEM54-201ENST00000329151 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
TMEM54-201ENST00000329151 LINC00472Q9H8W2 130 aa11.66□□□□□ -0.54
TMEM54-201ENST00000329151 LOC110117498A0A087WWA1 95 aa11.65□□□□□ -0.54
TMEM54-201ENST00000329151 C21orf62-AS1Q17RA5 79 aa11.65□□□□□ -0.54
TMEM54-201ENST00000329151 MT2AP02795 61 aa11.64□□□□□ -0.55
TMEM54-201ENST00000329151 PDE6GP18545 87 aa11.64□□□□□ -0.55
TMEM54-201ENST00000329151 Q6ZQT0 140 aa11.64□□□□□ -0.55
TMEM54-201ENST00000329151 H3BT86 120 aa11.63□□□□□ -0.55
TMEM54-201ENST00000329151 HRES1P13985 223 aa11.62□□□□□ -0.55
TMEM54-201ENST00000329151 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
TMEM54-201ENST00000329151 C14orf132Q9NPU4 83 aa11.62□□□□□ -0.55
TMEM54-201ENST00000329151 KRTAP10-10P60014 251 aa11.61□□□□□ -0.55
TMEM54-201ENST00000329151 SPCS1Q9Y6A9 102 aa11.61□□□□□ -0.55
TMEM54-201ENST00000329151 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
TMEM54-201ENST00000329151 A0A1B0GW54 56 aa11.58□□□□□ -0.56
TMEM54-201ENST00000329151 PCP4L1A6NKN8 68 aa11.58□□□□□ -0.56
TMEM54-201ENST00000329151 MPLKIPQ8TAP9 179 aa11.58□□□□□ -0.56
TMEM54-201ENST00000329151 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
TMEM54-201ENST00000329151 MT1FP04733 61 aa11.54□□□□□ -0.56
TMEM54-201ENST00000329151 J3KT08 172 aa11.52□□□□□ -0.57
TMEM54-201ENST00000329151 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
TMEM54-201ENST00000329151 FCGBPQ9Y6R7 5405 aaPredicted RBP11.48□□□□□ -0.57
TMEM54-201ENST00000329151 K7EP34 96 aa11.47□□□□□ -0.57
TMEM54-201ENST00000329151 KRTAP19-1Q8IUB9 90 aa11.47□□□□□ -0.57
TMEM54-201ENST00000329151 LCE2BO14633 110 aa11.46□□□□□ -0.57
TMEM54-201ENST00000329151 NDUFB1O75438 58 aa11.46□□□□□ -0.57
TMEM54-201ENST00000329151 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
TMEM54-201ENST00000329151 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
TMEM54-201ENST00000329151 SPINK7P58062 85 aa11.44□□□□□ -0.58
TMEM54-201ENST00000329151 KRTAP9-3Q9BYQ3 159 aa11.44□□□□□ -0.58
TMEM54-201ENST00000329151 NREPQ16612 68 aa11.43□□□□□ -0.58
TMEM54-201ENST00000329151 PRO0461Q9UI25 63 aa11.41□□□□□ -0.58
TMEM54-201ENST00000329151 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
TMEM54-201ENST00000329151 A8MWP4 228 aa11.37□□□□□ -0.59
TMEM54-201ENST00000329151 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
TMEM54-201ENST00000329151 IGKV3D-7A0A0C4DH55 119 aa11.33□□□□□ -0.6
TMEM54-201ENST00000329151 Q8N9P0 234 aaPredicted RBP11.31□□□□□ -0.6
TMEM54-201ENST00000329151 C8orf17Q9NRJ1 99 aa11.3□□□□□ -0.6
TMEM54-201ENST00000329151 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
TMEM54-201ENST00000329151 F8W1H4 67 aa11.26□□□□□ -0.61
TMEM54-201ENST00000329151 BPY2O14599 106 aa11.24□□□□□ -0.61
TMEM54-201ENST00000329151 Q6ZVQ6 151 aa11.24□□□□□ -0.61
TMEM54-201ENST00000329151 K7EQZ3 153 aa11.2□□□□□ -0.62
TMEM54-201ENST00000329151 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
TMEM54-201ENST00000329151 MACF1Q9UPN3 7388 aaKnown RBP11.18□□□□□ -0.62
TMEM54-201ENST00000329151 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
TMEM54-201ENST00000329151 UBL5Q9BZL1 73 aa11.16□□□□□ -0.62
TMEM54-201ENST00000329151 KRTAP19-6Q3LI70 58 aa11.15□□□□□ -0.62
TMEM54-201ENST00000329151 SYNE2Q8WXH0 6885 aaKnown RBP11.15□□□□□ -0.62
TMEM54-201ENST00000329151 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
TMEM54-201ENST00000329151 MRPL34Q9BQ48 92 aaKnown RBP11.13□□□□□ -0.63
TMEM54-201ENST00000329151 hDV103S1A0JD37 113 aa11.12□□□□□ -0.63
TMEM54-201ENST00000329151 NDUFS5O43920 106 aa11.12□□□□□ -0.63
TMEM54-201ENST00000329151 Q8N9L7 120 aa11.1□□□□□ -0.63
TMEM54-201ENST00000329151 H1FX-AS1Q4G0G2 97 aa11.09□□□□□ -0.63
TMEM54-201ENST00000329151 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
TMEM54-201ENST00000329151 IGKV2-30P06310 120 aa11.01□□□□□ -0.65
TMEM54-201ENST00000329151 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
TMEM54-201ENST00000329151 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
TMEM54-201ENST00000329151 A0A1B0GV90 55 aa10.95□□□□□ -0.66
TMEM54-201ENST00000329151 CXCL6P80162 114 aa10.94□□□□□ -0.66
TMEM54-201ENST00000329151 HCG22E2RYF7 251 aa10.93□□□□□ -0.66
TMEM54-201ENST00000329151 ACYP1P07311 99 aa10.92□□□□□ -0.66
TMEM54-201ENST00000329151 FAM240AA0A1B0GVK7 77 aa10.88□□□□□ -0.67
TMEM54-201ENST00000329151 Q5W150 140 aa10.87□□□□□ -0.67
TMEM54-201ENST00000329151 KRTAP6-3Q3LI67 103 aa10.84□□□□□ -0.67
TMEM54-201ENST00000329151 FAM236AA0A1B0GUQ0 79 aa10.81□□□□□ -0.68
TMEM54-201ENST00000329151 FAM236BA0A1B0GV22 79 aa10.81□□□□□ -0.68
TMEM54-201ENST00000329151 C4orf26Q17RF5 130 aa10.79□□□□□ -0.68
TMEM54-201ENST00000329151 ATP5EP2Q5VTU8 51 aa10.77□□□□□ -0.69
TMEM54-201ENST00000329151 C5orf47Q569G3 176 aa10.73□□□□□ -0.69
TMEM54-201ENST00000329151 TP53AIP1Q9HCN2 124 aa10.72□□□□□ -0.69
TMEM54-201ENST00000329151 LINC00643Q86TS7 51 aa10.68□□□□□ -0.7
TMEM54-201ENST00000329151 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
TMEM54-201ENST00000329151 A6NN06 94 aa10.66□□□□□ -0.7
TMEM54-201ENST00000329151 S4R3F8 94 aa10.66□□□□□ -0.7
TMEM54-201ENST00000329151 CSAG1Q6PB30 78 aa10.63□□□□□ -0.71
TMEM54-201ENST00000329151 J3QR89 54 aa10.61□□□□□ -0.71
TMEM54-201ENST00000329151 Q5VV11 94 aa10.61□□□□□ -0.71
TMEM54-201ENST00000329151 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
TMEM54-201ENST00000329151 A0A087WVE0 104 aa10.54□□□□□ -0.72
TMEM54-201ENST00000329151 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
TMEM54-201ENST00000329151 LCA10Q71F78 164 aa10.5□□□□□ -0.73
TMEM54-201ENST00000329151 NEBP20929 6669 aa10.48□□□□□ -0.73
TMEM54-201ENST00000329151 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
TMEM54-201ENST00000329151 UQCRQO14949 82 aa10.47□□□□□ -0.73
TMEM54-201ENST00000329151 MT1BP07438 61 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms