RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LRBAP50851 2863 aa6.1□□□□□ -1.43
COL4A5-201ENST00000328300 HRNRQ86YZ3 2850 aaPredicted RBP6.09□□□□□ -1.43
COL4A5-201ENST00000328300 COL12A1Q99715 3063 aa6.08□□□□□ -1.44
COL4A5-201ENST00000328300 CDH23Q9H251 3354 aa6.07□□□□□ -1.44
COL4A5-201ENST00000328300 UNC80Q8N2C7 3258 aa6.07□□□□□ -1.44
COL4A5-201ENST00000328300 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
COL4A5-201ENST00000328300 LAMA2P24043 3122 aaKnown RBP6.06□□□□□ -1.44
COL4A5-201ENST00000328300 DMXL2Q8TDJ6 3036 aa6.05□□□□□ -1.44
COL4A5-201ENST00000328300 KRTAP10-8P60410 259 aa6.05□□□□□ -1.44
COL4A5-201ENST00000328300 FRYLO94915 3013 aa6.04□□□□□ -1.44
COL4A5-201ENST00000328300 SZT2Q5T011 3432 aa6.02□□□□□ -1.45
COL4A5-201ENST00000328300 NBEAQ8NFP9 2946 aa5.98□□□□□ -1.45
COL4A5-201ENST00000328300 TNP1P09430 55 aa5.97□□□□□ -1.45
COL4A5-201ENST00000328300 TACC2O95359 2948 aa5.97□□□□□ -1.45
COL4A5-201ENST00000328300 ADGRG4Q8IZF6 3080 aa5.97□□□□□ -1.45
COL4A5-201ENST00000328300 ZZEF1O43149 2961 aa5.94□□□□□ -1.46
COL4A5-201ENST00000328300 LAMA1P25391 3075 aa5.94□□□□□ -1.46
COL4A5-201ENST00000328300 KALRNO60229 2985 aa5.94□□□□□ -1.46
COL4A5-201ENST00000328300 XIRP2A4UGR9 3374 aa5.93□□□□□ -1.46
COL4A5-201ENST00000328300 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
COL4A5-201ENST00000328300 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
COL4A5-201ENST00000328300 ZANQ9Y493 2812 aa5.92□□□□□ -1.46
COL4A5-201ENST00000328300 PDZD2O15018 2839 aa5.89□□□□□ -1.47
COL4A5-201ENST00000328300 BOD1L1Q8NFC6 3051 aa5.86□□□□□ -1.47
COL4A5-201ENST00000328300 DMXL1Q9Y485 3027 aa5.85□□□□□ -1.47
COL4A5-201ENST00000328300 H0YAA0 97 aa5.85□□□□□ -1.47
COL4A5-201ENST00000328300 SPTBN5Q9NRC6 3674 aaKnown RBP5.84□□□□□ -1.47
COL4A5-201ENST00000328300 MXRA5Q9NR99 2828 aa5.83□□□□□ -1.48
COL4A5-201ENST00000328300 FBN2P35556 2912 aa5.82□□□□□ -1.48
COL4A5-201ENST00000328300 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
COL4A5-201ENST00000328300 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
COL4A5-201ENST00000328300 VCANP13611 3396 aa5.8□□□□□ -1.48
COL4A5-201ENST00000328300 COL6A3P12111 3177 aa5.8□□□□□ -1.48
COL4A5-201ENST00000328300 P0C880 135 aa5.79□□□□□ -1.48
COL4A5-201ENST00000328300 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
COL4A5-201ENST00000328300 USP34Q70CQ2 3546 aa5.78□□□□□ -1.48
COL4A5-201ENST00000328300 ASH1LQ9NR48 2969 aaKnown RBP5.78□□□□□ -1.48
COL4A5-201ENST00000328300 FREM2Q5SZK8 3169 aa5.77□□□□□ -1.49
COL4A5-201ENST00000328300 NF1P21359 2839 aa5.76□□□□□ -1.49
COL4A5-201ENST00000328300 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
COL4A5-201ENST00000328300 REV3LO60673 3130 aa5.74□□□□□ -1.49
COL4A5-201ENST00000328300 CELSR3Q9NYQ7 3312 aa5.7□□□□□ -1.5
COL4A5-201ENST00000328300 TENM2Q9NT68 2774 aa5.7□□□□□ -1.5
COL4A5-201ENST00000328300 TENM3Q9P273 2699 aa5.69□□□□□ -1.5
COL4A5-201ENST00000328300 CRYBG3Q68DQ2 2970 aa5.68□□□□□ -1.5
COL4A5-201ENST00000328300 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.51
COL4A5-201ENST00000328300 DNAH14Q0VDD8 3507 aa5.64□□□□□ -1.51
COL4A5-201ENST00000328300 ANK3Q12955 4377 aaKnown RBP5.64□□□□□ -1.51
COL4A5-201ENST00000328300 TENM1Q9UKZ4 2725 aa5.61□□□□□ -1.51
COL4A5-201ENST00000328300 CELSR1Q9NYQ6 3014 aa5.54□□□□□ -1.52
COL4A5-201ENST00000328300 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
COL4A5-201ENST00000328300 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
COL4A5-201ENST00000328300 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
COL4A5-201ENST00000328300 LOC400499M0QZD8 3231 aa5.5□□□□□ -1.53
COL4A5-201ENST00000328300 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
COL4A5-201ENST00000328300 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.53
COL4A5-201ENST00000328300 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
COL4A5-201ENST00000328300 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
COL4A5-201ENST00000328300 TGP01266 2768 aa5.43□□□□□ -1.54
COL4A5-201ENST00000328300 VWFP04275 2813 aa5.43□□□□□ -1.54
COL4A5-201ENST00000328300 KRTAP12-1P59990 96 aa5.41□□□□□ -1.54
COL4A5-201ENST00000328300 FBN1P35555 2871 aaKnown RBP5.37□□□□□ -1.55
COL4A5-201ENST00000328300 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
COL4A5-201ENST00000328300 HUWE1Q7Z6Z7 4374 aaKnown RBP5.33□□□□□ -1.56
COL4A5-201ENST00000328300 SPEGQ15772 3267 aa5.31□□□□□ -1.56
COL4A5-201ENST00000328300 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
COL4A5-201ENST00000328300 RELNP78509 3460 aa5.26□□□□□ -1.57
COL4A5-201ENST00000328300 PKD1L1Q8TDX9 2849 aa5.24□□□□□ -1.57
COL4A5-201ENST00000328300 NBPF19A0A087WUL8 3843 aa5.23□□□□□ -1.57
COL4A5-201ENST00000328300 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
COL4A5-201ENST00000328300 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
COL4A5-201ENST00000328300 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
COL4A5-201ENST00000328300 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
COL4A5-201ENST00000328300 DCHS1Q96JQ0 3298 aa5.18□□□□□ -1.58
COL4A5-201ENST00000328300 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
COL4A5-201ENST00000328300 WDFY3Q8IZQ1 3526 aa5.17□□□□□ -1.58
COL4A5-201ENST00000328300 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
COL4A5-201ENST00000328300 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
COL4A5-201ENST00000328300 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
COL4A5-201ENST00000328300 DNAH9Q9NYC9 4486 aa5.1□□□□□ -1.59
COL4A5-201ENST00000328300 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
COL4A5-201ENST00000328300 INE1O15225 51 aa5.04□□□□□ -1.6
COL4A5-201ENST00000328300 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
COL4A5-201ENST00000328300 LAMA5O15230 3695 aa5.04□□□□□ -1.6
COL4A5-201ENST00000328300 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
COL4A5-201ENST00000328300 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
COL4A5-201ENST00000328300 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
COL4A5-201ENST00000328300 BSNQ9UPA5 3926 aa5.01□□□□□ -1.61
COL4A5-201ENST00000328300 TRRAPQ9Y4A5 3859 aa4.99□□□□□ -1.61
COL4A5-201ENST00000328300 ZFHX4Q86UP3 3567 aa4.98□□□□□ -1.61
COL4A5-201ENST00000328300 ZFHX3Q15911 3703 aa4.97□□□□□ -1.61
COL4A5-201ENST00000328300 DMDP11532 3685 aa4.96□□□□□ -1.62
COL4A5-201ENST00000328300 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.62
COL4A5-201ENST00000328300 CUBNO60494 3623 aa4.95□□□□□ -1.62
COL4A5-201ENST00000328300 VPS13DQ5THJ4 4388 aa4.93□□□□□ -1.62
COL4A5-201ENST00000328300 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
COL4A5-201ENST00000328300 PLECQ15149 4684 aaKnown RBP4.92□□□□□ -1.62
COL4A5-201ENST00000328300 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
COL4A5-201ENST00000328300 SPENQ96T58 3664 aaKnown RBP4.87□□□□□ -1.63
COL4A5-201ENST00000328300 DYNC1H1Q14204 4646 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms