RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 Q1T7F1 81 aa5.29□□□□□ -1.56
CD28-201ENST00000324106 Q6ZRN7 208 aaPredicted RBP5.29□□□□□ -1.56
CD28-201ENST00000324106 PANO1I0J062 215 aa5.28□□□□□ -1.56
CD28-201ENST00000324106 NIPBLQ6KC79 2804 aaeCLIP5.28□□□□□ -1.56
CD28-201ENST00000324106 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
CD28-201ENST00000324106 UTP20O75691 2785 aaKnown RBP5.27□□□□□ -1.57
CD28-201ENST00000324106 TACC2O95359 2948 aa5.27□□□□□ -1.57
CD28-201ENST00000324106 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
CD28-201ENST00000324106 KALRNO60229 2985 aa5.25□□□□□ -1.57
CD28-201ENST00000324106 A0A087X002 238 aa5.25□□□□□ -1.57
CD28-201ENST00000324106 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
CD28-201ENST00000324106 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
CD28-201ENST00000324106 CRYBG3Q68DQ2 2970 aa5.23□□□□□ -1.57
CD28-201ENST00000324106 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.57
CD28-201ENST00000324106 M0QZ58 72 aa5.2□□□□□ -1.58
CD28-201ENST00000324106 LCA10Q71F78 164 aa5.19□□□□□ -1.58
CD28-201ENST00000324106 Q5XG85 94 aa5.18□□□□□ -1.58
CD28-201ENST00000324106 Q75L30 129 aa5.17□□□□□ -1.58
CD28-201ENST00000324106 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
CD28-201ENST00000324106 APCP25054 2843 aa5.17□□□□□ -1.58
CD28-201ENST00000324106 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
CD28-201ENST00000324106 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.58
CD28-201ENST00000324106 TENM3Q9P273 2699 aa5.15□□□□□ -1.59
CD28-201ENST00000324106 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
CD28-201ENST00000324106 NBPF19A0A087WUL8 3843 aa5.13□□□□□ -1.59
CD28-201ENST00000324106 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
CD28-201ENST00000324106 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
CD28-201ENST00000324106 KRTAP13-2Q52LG2 175 aa5.09□□□□□ -1.59
CD28-201ENST00000324106 KRTAP13-1Q8IUC0 172 aa5.09□□□□□ -1.59
CD28-201ENST00000324106 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
CD28-201ENST00000324106 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
CD28-201ENST00000324106 LRBAP50851 2863 aa5.07□□□□□ -1.6
CD28-201ENST00000324106 CELSR2Q9HCU4 2923 aa5.06□□□□□ -1.6
CD28-201ENST00000324106 DCHS2Q6V1P9 2916 aa5.04□□□□□ -1.6
CD28-201ENST00000324106 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
CD28-201ENST00000324106 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
CD28-201ENST00000324106 TENM1Q9UKZ4 2725 aa5.02□□□□□ -1.61
CD28-201ENST00000324106 ROMO1P60602 79 aa5.01□□□□□ -1.61
CD28-201ENST00000324106 A8MUU9 505 aa5.01□□□□□ -1.61
CD28-201ENST00000324106 TENM2Q9NT68 2774 aa4.99□□□□□ -1.61
CD28-201ENST00000324106 Q5VV11 94 aa4.98□□□□□ -1.61
CD28-201ENST00000324106 AKAP9Q99996 3911 aa4.97□□□□□ -1.61
CD28-201ENST00000324106 NF1P21359 2839 aa4.96□□□□□ -1.62
CD28-201ENST00000324106 ZANQ9Y493 2812 aa4.95□□□□□ -1.62
CD28-201ENST00000324106 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
CD28-201ENST00000324106 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
CD28-201ENST00000324106 TPRXLQ17RH7 258 aa4.93□□□□□ -1.62
CD28-201ENST00000324106 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
CD28-201ENST00000324106 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
CD28-201ENST00000324106 KRTAP1-4P0C5Y4 121 aa4.9□□□□□ -1.63
CD28-201ENST00000324106 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
CD28-201ENST00000324106 XP32Q5T750 250 aa4.88□□□□□ -1.63
CD28-201ENST00000324106 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
CD28-201ENST00000324106 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
CD28-201ENST00000324106 ANK2Q01484 3957 aa4.86□□□□□ -1.63
CD28-201ENST00000324106 TNP1P09430 55 aa4.85□□□□□ -1.63
CD28-201ENST00000324106 PDZD2O15018 2839 aa4.85□□□□□ -1.63
CD28-201ENST00000324106 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
CD28-201ENST00000324106 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
CD28-201ENST00000324106 HRNRQ86YZ3 2850 aaPredicted RBP4.82□□□□□ -1.64
CD28-201ENST00000324106 A0A1B0GVY2 172 aa4.76□□□□□ -1.65
CD28-201ENST00000324106 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
CD28-201ENST00000324106 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
CD28-201ENST00000324106 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
CD28-201ENST00000324106 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
CD28-201ENST00000324106 A8MU10 97 aa4.74□□□□□ -1.65
CD28-201ENST00000324106 FBN2P35556 2912 aa4.73□□□□□ -1.65
CD28-201ENST00000324106 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
CD28-201ENST00000324106 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CD28-201ENST00000324106 TGP01266 2768 aa4.68□□□□□ -1.66
CD28-201ENST00000324106 VWFP04275 2813 aa4.68□□□□□ -1.66
CD28-201ENST00000324106 DNAH6Q9C0G6 4158 aa4.66□□□□□ -1.66
CD28-201ENST00000324106 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CD28-201ENST00000324106 SRRM2Q9UQ35 2752 aaKnown RBP4.62□□□□□ -1.67
CD28-201ENST00000324106 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
CD28-201ENST00000324106 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
CD28-201ENST00000324106 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
CD28-201ENST00000324106 ALMS1Q8TCU4 4167 aa4.58□□□□□ -1.68
CD28-201ENST00000324106 CMYA5Q8N3K9 4069 aa4.58□□□□□ -1.68
CD28-201ENST00000324106 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
CD28-201ENST00000324106 A6NN06 94 aa4.55□□□□□ -1.68
CD28-201ENST00000324106 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
CD28-201ENST00000324106 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
CD28-201ENST00000324106 FBN1P35555 2871 aaKnown RBP4.49□□□□□ -1.69
CD28-201ENST00000324106 P0C880 135 aa4.47□□□□□ -1.69
CD28-201ENST00000324106 H3BS24 57 aa4.44□□□□□ -1.7
CD28-201ENST00000324106 H0YAA0 97 aa4.43□□□□□ -1.7
CD28-201ENST00000324106 DNAH7Q8WXX0 4024 aa4.4□□□□□ -1.71
CD28-201ENST00000324106 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
CD28-201ENST00000324106 DNHD1Q96M86 4753 aa4.33□□□□□ -1.72
CD28-201ENST00000324106 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
CD28-201ENST00000324106 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
CD28-201ENST00000324106 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
CD28-201ENST00000324106 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
CD28-201ENST00000324106 LYSTQ99698 3801 aa4.3□□□□□ -1.72
CD28-201ENST00000324106 DNAH17Q9UFH2 4485 aa4.28□□□□□ -1.72
CD28-201ENST00000324106 DNAH9Q9NYC9 4486 aa4.28□□□□□ -1.72
CD28-201ENST00000324106 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
CD28-201ENST00000324106 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
CD28-201ENST00000324106 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms