RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 KRTAP13-2Q52LG2 175 aa12.71□□□□□ -0.38
SPHK1-201ENST00000323374 SACSQ9NZJ4 4579 aa12.71□□□□□ -0.38
SPHK1-201ENST00000323374 C1orf64Q8NEQ6 169 aa12.67□□□□□ -0.38
SPHK1-201ENST00000323374 MRPL34Q9BQ48 92 aaKnown RBP12.67□□□□□ -0.38
SPHK1-201ENST00000323374 SMIM26A0A096LP01 95 aa12.66□□□□□ -0.38
SPHK1-201ENST00000323374 LINC00336Q6ZUF6 198 aa12.66□□□□□ -0.38
SPHK1-201ENST00000323374 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.38
SPHK1-201ENST00000323374 KRTAP1-4P0C5Y4 121 aa12.65□□□□□ -0.38
SPHK1-201ENST00000323374 NDUFS5O43920 106 aa12.64□□□□□ -0.39
SPHK1-201ENST00000323374 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
SPHK1-201ENST00000323374 CYP4F30PQ9H0H9 118 aa12.61□□□□□ -0.39
SPHK1-201ENST00000323374 FP248Q71RG6 208 aaPredicted RBP12.58□□□□□ -0.4
SPHK1-201ENST00000323374 PRR4Q16378 134 aa12.57□□□□□ -0.4
SPHK1-201ENST00000323374 SPANXA2-OT1Q8N9U9 137 aa12.56□□□□□ -0.4
SPHK1-201ENST00000323374 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
SPHK1-201ENST00000323374 PLA2G1BP04054 148 aaKnown RBP12.56□□□□□ -0.4
SPHK1-201ENST00000323374 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
SPHK1-201ENST00000323374 PKHD1P08F94 4074 aa12.53□□□□□ -0.4
SPHK1-201ENST00000323374 LIMD2Q9BT23 127 aa12.52□□□□□ -0.4
SPHK1-201ENST00000323374 A0A1B0GVY2 172 aa12.5□□□□□ -0.41
SPHK1-201ENST00000323374 TYMSOSQ8TAI1 123 aa12.5□□□□□ -0.41
SPHK1-201ENST00000323374 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
SPHK1-201ENST00000323374 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
SPHK1-201ENST00000323374 LINC00313P59037 77 aa12.47□□□□□ -0.41
SPHK1-201ENST00000323374 PCOTHQ58A44 107 aa12.43□□□□□ -0.42
SPHK1-201ENST00000323374 SMR3BP02814 79 aaPredicted RBP12.43□□□□□ -0.42
SPHK1-201ENST00000323374 SPINK1P00995 79 aa12.42□□□□□ -0.42
SPHK1-201ENST00000323374 IGLV7-46A0A075B6I9 117 aa12.41□□□□□ -0.42
SPHK1-201ENST00000323374 Q5W150 140 aa12.4□□□□□ -0.43
SPHK1-201ENST00000323374 MPLKIPQ8TAP9 179 aa12.4□□□□□ -0.43
SPHK1-201ENST00000323374 LOC101927531A0A1B0GV80 90 aa12.37□□□□□ -0.43
SPHK1-201ENST00000323374 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
SPHK1-201ENST00000323374 PRR26Q8N8Z3 221 aa12.37□□□□□ -0.43
SPHK1-201ENST00000323374 Q8N9P0 234 aaPredicted RBP12.36□□□□□ -0.43
SPHK1-201ENST00000323374 RYR2Q92736 4967 aa12.35□□□□□ -0.43
SPHK1-201ENST00000323374 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
SPHK1-201ENST00000323374 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
SPHK1-201ENST00000323374 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
SPHK1-201ENST00000323374 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
SPHK1-201ENST00000323374 RPS29P62273 56 aaKnown RBP12.31□□□□□ -0.44
SPHK1-201ENST00000323374 SPAG11AQ6PDA7 123 aa12.31□□□□□ -0.44
SPHK1-201ENST00000323374 KRTAP16-1A8MUX0 517 aa12.3□□□□□ -0.44
SPHK1-201ENST00000323374 KRTAP10-4P60372 401 aaPredicted RBP12.28□□□□□ -0.44
SPHK1-201ENST00000323374 Q1T7F1 81 aa12.28□□□□□ -0.44
SPHK1-201ENST00000323374 FAT1Q14517 4588 aa12.25□□□□□ -0.45
SPHK1-201ENST00000323374 COA5Q86WW8 74 aa12.24□□□□□ -0.45
SPHK1-201ENST00000323374 KMT2CQ8NEZ4 4911 aaKnown RBP12.22□□□□□ -0.45
SPHK1-201ENST00000323374 RETNLBQ9BQ08 111 aa12.2□□□□□ -0.46
SPHK1-201ENST00000323374 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
SPHK1-201ENST00000323374 V9GYY9 64 aa12.18□□□□□ -0.46
SPHK1-201ENST00000323374 IGKV2-30P06310 120 aa12.14□□□□□ -0.47
SPHK1-201ENST00000323374 HRES1P13985 223 aa12.11□□□□□ -0.47
SPHK1-201ENST00000323374 PKHD1L1Q86WI1 4243 aa12.1□□□□□ -0.47
SPHK1-201ENST00000323374 PSPHP1O15172 72 aa12.08□□□□□ -0.47
SPHK1-201ENST00000323374 ACYP2P14621 99 aa12.02□□□□□ -0.48
SPHK1-201ENST00000323374 IGKV2D-30A0A075B6S6 120 aa12.02□□□□□ -0.49
SPHK1-201ENST00000323374 A8MUN3 132 aa12.01□□□□□ -0.49
SPHK1-201ENST00000323374 DMAC1Q96GE9 116 aa12.01□□□□□ -0.49
SPHK1-201ENST00000323374 PRR15LQ9BU68 103 aa11.95□□□□□ -0.5
SPHK1-201ENST00000323374 C9orf92A6NGG3 77 aa11.94□□□□□ -0.5
SPHK1-201ENST00000323374 Q5VV11 94 aa11.94□□□□□ -0.5
SPHK1-201ENST00000323374 Q5VSD8 79 aa11.91□□□□□ -0.5
SPHK1-201ENST00000323374 LINC01558Q9Y6Z2 57 aa11.9□□□□□ -0.5
SPHK1-201ENST00000323374 C20orf166-AS1Q96NR2 134 aa11.9□□□□□ -0.5
SPHK1-201ENST00000323374 A8MUU9 505 aa11.89□□□□□ -0.51
SPHK1-201ENST00000323374 C7orf65Q6ZTY9 151 aa11.89□□□□□ -0.51
SPHK1-201ENST00000323374 RYR3Q15413 4870 aa11.89□□□□□ -0.51
SPHK1-201ENST00000323374 CHKB-CPT1BH3BT56 60 aa11.87□□□□□ -0.51
SPHK1-201ENST00000323374 HSPG2P98160 4391 aa11.86□□□□□ -0.51
SPHK1-201ENST00000323374 Q8N1X5 172 aa11.85□□□□□ -0.51
SPHK1-201ENST00000323374 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
SPHK1-201ENST00000323374 Q75L30 129 aa11.83□□□□□ -0.52
SPHK1-201ENST00000323374 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
SPHK1-201ENST00000323374 RYR1P21817 5038 aa11.78□□□□□ -0.52
SPHK1-201ENST00000323374 TNXBP22105 4242 aa11.78□□□□□ -0.52
SPHK1-201ENST00000323374 LRP1Q07954 4544 aaKnown RBP11.77□□□□□ -0.53
SPHK1-201ENST00000323374 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
SPHK1-201ENST00000323374 A6NED7 52 aa11.69□□□□□ -0.54
SPHK1-201ENST00000323374 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
SPHK1-201ENST00000323374 A8MU10 97 aa11.65□□□□□ -0.55
SPHK1-201ENST00000323374 SPINK7P58062 85 aa11.62□□□□□ -0.55
SPHK1-201ENST00000323374 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
SPHK1-201ENST00000323374 LCA10Q71F78 164 aa11.57□□□□□ -0.56
SPHK1-201ENST00000323374 A0A1B0GU69 56 aa11.56□□□□□ -0.56
SPHK1-201ENST00000323374 PMAIP1Q13794 54 aa11.56□□□□□ -0.56
SPHK1-201ENST00000323374 CDC42SE1Q9NRR8 79 aa11.54□□□□□ -0.56
SPHK1-201ENST00000323374 ATP11AUNQ6ZP68 121 aa11.53□□□□□ -0.56
SPHK1-201ENST00000323374 MT1HL1P0DM35 61 aa11.52□□□□□ -0.57
SPHK1-201ENST00000323374 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
SPHK1-201ENST00000323374 KRTAP3-1Q9BYR8 98 aa11.48□□□□□ -0.57
SPHK1-201ENST00000323374 RPL37P61927 97 aaKnown RBP11.48□□□□□ -0.57
SPHK1-201ENST00000323374 SPTSSBQ8NFR3 76 aa11.46□□□□□ -0.57
SPHK1-201ENST00000323374 XP32Q5T750 250 aa11.45□□□□□ -0.58
SPHK1-201ENST00000323374 EPPK1P58107 5090 aaKnown RBP11.45□□□□□ -0.58
SPHK1-201ENST00000323374 MYCBP2O75592 4640 aa11.43□□□□□ -0.58
SPHK1-201ENST00000323374 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
SPHK1-201ENST00000323374 SEC61GP60059 68 aa11.33□□□□□ -0.6
SPHK1-201ENST00000323374 UQCR11O14957 56 aa11.31□□□□□ -0.6
SPHK1-201ENST00000323374 A6NN06 94 aa11.3□□□□□ -0.6
SPHK1-201ENST00000323374 KTN1-AS1Q86SY8 53 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms