RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 LINC00472Q9H8W2 130 aa6.16□□□□□ -1.42
TPM3-204ENST00000323144 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
TPM3-204ENST00000323144 VPS25Q9BRG1 176 aa6.12□□□□□ -1.43
TPM3-204ENST00000323144 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
TPM3-204ENST00000323144 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
TPM3-204ENST00000323144 TMEM256-PLSCR3K7ERE1 68 aa6.11□□□□□ -1.43
TPM3-204ENST00000323144 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
TPM3-204ENST00000323144 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TPM3-204ENST00000323144 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
TPM3-204ENST00000323144 PCP4L1A6NKN8 68 aa6.09□□□□□ -1.43
TPM3-204ENST00000323144 H3BQ85 93 aa6.09□□□□□ -1.43
TPM3-204ENST00000323144 UBE2V1Q13404 147 aa6.09□□□□□ -1.43
TPM3-204ENST00000323144 COX6CP09669 75 aa6.08□□□□□ -1.44
TPM3-204ENST00000323144 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
TPM3-204ENST00000323144 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
TPM3-204ENST00000323144 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
TPM3-204ENST00000323144 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
TPM3-204ENST00000323144 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
TPM3-204ENST00000323144 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
TPM3-204ENST00000323144 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
TPM3-204ENST00000323144 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
TPM3-204ENST00000323144 SPINK7P58062 85 aa6.01□□□□□ -1.45
TPM3-204ENST00000323144 NAA38Q9BRA0 125 aaKnown RBP6.01□□□□□ -1.45
TPM3-204ENST00000323144 SCGB1C2P0DMR2 95 aa6□□□□□ -1.45
TPM3-204ENST00000323144 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
TPM3-204ENST00000323144 C9JAW5 83 aa5.99□□□□□ -1.45
TPM3-204ENST00000323144 J3KT08 172 aa5.99□□□□□ -1.45
TPM3-204ENST00000323144 M0R143 59 aa5.99□□□□□ -1.45
TPM3-204ENST00000323144 Q6ZQT0 140 aa5.99□□□□□ -1.45
TPM3-204ENST00000323144 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
TPM3-204ENST00000323144 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
TPM3-204ENST00000323144 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
TPM3-204ENST00000323144 IGKV3D-7A0A0C4DH55 119 aa5.96□□□□□ -1.46
TPM3-204ENST00000323144 A8MWP4 228 aa5.95□□□□□ -1.46
TPM3-204ENST00000323144 MTURNQ8N3F0 131 aa5.95□□□□□ -1.46
TPM3-204ENST00000323144 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
TPM3-204ENST00000323144 NDUFB1O75438 58 aa5.93□□□□□ -1.46
TPM3-204ENST00000323144 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
TPM3-204ENST00000323144 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
TPM3-204ENST00000323144 ATXN8Q156A1 80 aa5.92□□□□□ -1.46
TPM3-204ENST00000323144 COL5A1-AS1Q5SY13 56 aa5.92□□□□□ -1.46
TPM3-204ENST00000323144 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
TPM3-204ENST00000323144 Q6ZVQ6 151 aa5.91□□□□□ -1.46
TPM3-204ENST00000323144 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
TPM3-204ENST00000323144 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
TPM3-204ENST00000323144 BATFQ16520 125 aa5.89□□□□□ -1.47
TPM3-204ENST00000323144 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
TPM3-204ENST00000323144 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
TPM3-204ENST00000323144 K7EQZ3 153 aa5.86□□□□□ -1.47
TPM3-204ENST00000323144 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
TPM3-204ENST00000323144 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
TPM3-204ENST00000323144 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
TPM3-204ENST00000323144 A0A1B0GW54 56 aa5.84□□□□□ -1.47
TPM3-204ENST00000323144 PDE6GP18545 87 aa5.83□□□□□ -1.48
TPM3-204ENST00000323144 C9orf118A6NHY6 69 aa5.82□□□□□ -1.48
TPM3-204ENST00000323144 NREPQ16612 68 aa5.82□□□□□ -1.48
TPM3-204ENST00000323144 A0A1B0GV90 55 aa5.81□□□□□ -1.48
TPM3-204ENST00000323144 NDUFS5O43920 106 aa5.81□□□□□ -1.48
TPM3-204ENST00000323144 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
TPM3-204ENST00000323144 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
TPM3-204ENST00000323144 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
TPM3-204ENST00000323144 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
TPM3-204ENST00000323144 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
TPM3-204ENST00000323144 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
TPM3-204ENST00000323144 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
TPM3-204ENST00000323144 Q5W150 140 aa5.77□□□□□ -1.49
TPM3-204ENST00000323144 Q8N9L7 120 aa5.77□□□□□ -1.49
TPM3-204ENST00000323144 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
TPM3-204ENST00000323144 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
TPM3-204ENST00000323144 H3BT86 120 aa5.75□□□□□ -1.49
TPM3-204ENST00000323144 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
TPM3-204ENST00000323144 BPY2O14599 106 aa5.73□□□□□ -1.49
TPM3-204ENST00000323144 K7EP34 96 aa5.72□□□□□ -1.49
TPM3-204ENST00000323144 GTF2H5Q6ZYL4 71 aa5.72□□□□□ -1.49
TPM3-204ENST00000323144 HCG22E2RYF7 251 aa5.71□□□□□ -1.5
TPM3-204ENST00000323144 C4orf26Q17RF5 130 aa5.7□□□□□ -1.5
TPM3-204ENST00000323144 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
TPM3-204ENST00000323144 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
TPM3-204ENST00000323144 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
TPM3-204ENST00000323144 F8W1H4 67 aa5.65□□□□□ -1.5
TPM3-204ENST00000323144 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
TPM3-204ENST00000323144 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
TPM3-204ENST00000323144 MT1BP07438 61 aa5.62□□□□□ -1.51
TPM3-204ENST00000323144 CXCL6P80162 114 aa5.62□□□□□ -1.51
TPM3-204ENST00000323144 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
TPM3-204ENST00000323144 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
TPM3-204ENST00000323144 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
TPM3-204ENST00000323144 S4R3F8 94 aa5.6□□□□□ -1.51
TPM3-204ENST00000323144 LCA10Q71F78 164 aa5.58□□□□□ -1.52
TPM3-204ENST00000323144 A6NN06 94 aa5.55□□□□□ -1.52
TPM3-204ENST00000323144 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 ETDBQ3ZM63 59 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 Q5VV11 94 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 UBL5Q9BZL1 73 aa5.54□□□□□ -1.52
TPM3-204ENST00000323144 NEBP20929 6669 aa5.51□□□□□ -1.53
TPM3-204ENST00000323144 H3BS24 57 aa5.5□□□□□ -1.53
TPM3-204ENST00000323144 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms