RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 NDUFB1O75438 58 aa11.74□□□□□ -0.53
PDZD3-201ENST00000322712 KRTAP1-4P0C5Y4 121 aa11.74□□□□□ -0.53
PDZD3-201ENST00000322712 MMP24-AS1A0A0U1RRL7 71 aa11.72□□□□□ -0.53
PDZD3-201ENST00000322712 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
PDZD3-201ENST00000322712 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
PDZD3-201ENST00000322712 SPINK6Q6UWN8 80 aa11.71□□□□□ -0.54
PDZD3-201ENST00000322712 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.54
PDZD3-201ENST00000322712 APOBP04114 4563 aaKnown RBP11.7□□□□□ -0.54
PDZD3-201ENST00000322712 PRR4Q16378 134 aa11.7□□□□□ -0.54
PDZD3-201ENST00000322712 IGHV6-1A0A0B4J1U7 121 aa11.69□□□□□ -0.54
PDZD3-201ENST00000322712 TRAV22A0A0B4J277 110 aa11.68□□□□□ -0.54
PDZD3-201ENST00000322712 BRK1Q8WUW1 75 aa11.68□□□□□ -0.54
PDZD3-201ENST00000322712 LINC00208Q96KT6 92 aa11.68□□□□□ -0.54
PDZD3-201ENST00000322712 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
PDZD3-201ENST00000322712 H0Y9P7 68 aa11.66□□□□□ -0.54
PDZD3-201ENST00000322712 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
PDZD3-201ENST00000322712 CD164Q04900 197 aa11.65□□□□□ -0.54
PDZD3-201ENST00000322712 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
PDZD3-201ENST00000322712 H3BPC8 53 aa11.63□□□□□ -0.55
PDZD3-201ENST00000322712 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
PDZD3-201ENST00000322712 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
PDZD3-201ENST00000322712 Q1T7F1 81 aa11.63□□□□□ -0.55
PDZD3-201ENST00000322712 FAT1Q14517 4588 aa11.61□□□□□ -0.55
PDZD3-201ENST00000322712 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
PDZD3-201ENST00000322712 SPANXA2-OT1Q8N9U9 137 aa11.56□□□□□ -0.56
PDZD3-201ENST00000322712 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
PDZD3-201ENST00000322712 C1orf195Q5TG92 126 aa11.52□□□□□ -0.57
PDZD3-201ENST00000322712 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
PDZD3-201ENST00000322712 NDUFS5O43920 106 aa11.51□□□□□ -0.57
PDZD3-201ENST00000322712 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
PDZD3-201ENST00000322712 PSPHP1O15172 72 aa11.49□□□□□ -0.57
PDZD3-201ENST00000322712 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
PDZD3-201ENST00000322712 EPPK1P58107 5090 aaKnown RBP11.47□□□□□ -0.57
PDZD3-201ENST00000322712 V9GYY9 64 aa11.47□□□□□ -0.57
PDZD3-201ENST00000322712 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
PDZD3-201ENST00000322712 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
PDZD3-201ENST00000322712 HSPG2P98160 4391 aa11.43□□□□□ -0.58
PDZD3-201ENST00000322712 A8MUN3 132 aa11.4□□□□□ -0.58
PDZD3-201ENST00000322712 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
PDZD3-201ENST00000322712 RYR1P21817 5038 aa11.38□□□□□ -0.59
PDZD3-201ENST00000322712 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
PDZD3-201ENST00000322712 SPINK1P00995 79 aa11.38□□□□□ -0.59
PDZD3-201ENST00000322712 LINC00313P59037 77 aa11.37□□□□□ -0.59
PDZD3-201ENST00000322712 KIAA1109Q2LD37 5005 aa11.37□□□□□ -0.59
PDZD3-201ENST00000322712 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
PDZD3-201ENST00000322712 LINC00304Q8N9R0 145 aa11.37□□□□□ -0.59
PDZD3-201ENST00000322712 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
PDZD3-201ENST00000322712 Q5W150 140 aa11.35□□□□□ -0.59
PDZD3-201ENST00000322712 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
PDZD3-201ENST00000322712 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
PDZD3-201ENST00000322712 COA5Q86WW8 74 aa11.33□□□□□ -0.59
PDZD3-201ENST00000322712 Q5VSD8 79 aa11.32□□□□□ -0.6
PDZD3-201ENST00000322712 Q5VV11 94 aa11.32□□□□□ -0.6
PDZD3-201ENST00000322712 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
PDZD3-201ENST00000322712 KRTAP16-1A8MUX0 517 aa11.28□□□□□ -0.6
PDZD3-201ENST00000322712 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.61
PDZD3-201ENST00000322712 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.61
PDZD3-201ENST00000322712 PRR15LQ9BU68 103 aa11.27□□□□□ -0.61
PDZD3-201ENST00000322712 KRTAP17-1Q9BYP8 105 aa11.24□□□□□ -0.61
PDZD3-201ENST00000322712 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
PDZD3-201ENST00000322712 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
PDZD3-201ENST00000322712 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.62
PDZD3-201ENST00000322712 RPS29P62273 56 aaKnown RBP11.2□□□□□ -0.62
PDZD3-201ENST00000322712 LOC101927531A0A1B0GV80 90 aa11.17□□□□□ -0.62
PDZD3-201ENST00000322712 Q75L30 129 aa11.16□□□□□ -0.62
PDZD3-201ENST00000322712 A8MU10 97 aa11.15□□□□□ -0.62
PDZD3-201ENST00000322712 Q8N1X5 172 aa11.15□□□□□ -0.63
PDZD3-201ENST00000322712 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
PDZD3-201ENST00000322712 HRES1P13985 223 aa11.13□□□□□ -0.63
PDZD3-201ENST00000322712 LINC01558Q9Y6Z2 57 aa11.1□□□□□ -0.63
PDZD3-201ENST00000322712 TNXBP22105 4242 aa11.09□□□□□ -0.63
PDZD3-201ENST00000322712 A6NED7 52 aa11.09□□□□□ -0.63
PDZD3-201ENST00000322712 C9orf92A6NGG3 77 aa11.08□□□□□ -0.64
PDZD3-201ENST00000322712 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
PDZD3-201ENST00000322712 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
PDZD3-201ENST00000322712 LCA10Q71F78 164 aa11.03□□□□□ -0.64
PDZD3-201ENST00000322712 IGKV2-30P06310 120 aa11.02□□□□□ -0.65
PDZD3-201ENST00000322712 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
PDZD3-201ENST00000322712 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
PDZD3-201ENST00000322712 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
PDZD3-201ENST00000322712 IGKV2D-30A0A075B6S6 120 aa10.99□□□□□ -0.65
PDZD3-201ENST00000322712 SPTSSBQ8NFR3 76 aa10.99□□□□□ -0.65
PDZD3-201ENST00000322712 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
PDZD3-201ENST00000322712 CDC42SE1Q9NRR8 79 aa10.97□□□□□ -0.65
PDZD3-201ENST00000322712 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.66
PDZD3-201ENST00000322712 ACYP2P14621 99 aa10.94□□□□□ -0.66
PDZD3-201ENST00000322712 BIRC6Q9NR09 4857 aa10.93□□□□□ -0.66
PDZD3-201ENST00000322712 SPINK7P58062 85 aa10.89□□□□□ -0.67
PDZD3-201ENST00000322712 DMAC1Q96GE9 116 aa10.89□□□□□ -0.67
PDZD3-201ENST00000322712 C20orf166-AS1Q96NR2 134 aa10.88□□□□□ -0.67
PDZD3-201ENST00000322712 A8MUU9 505 aa10.88□□□□□ -0.67
PDZD3-201ENST00000322712 MT1HL1P0DM35 61 aa10.85□□□□□ -0.67
PDZD3-201ENST00000322712 SEC61GP60059 68 aa10.84□□□□□ -0.67
PDZD3-201ENST00000322712 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
PDZD3-201ENST00000322712 A6NN06 94 aa10.81□□□□□ -0.68
PDZD3-201ENST00000322712 KTN1-AS1Q86SY8 53 aa10.81□□□□□ -0.68
PDZD3-201ENST00000322712 HERC2O95714 4834 aa10.8□□□□□ -0.68
PDZD3-201ENST00000322712 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
PDZD3-201ENST00000322712 A0A1B0GU69 56 aa10.69□□□□□ -0.7
PDZD3-201ENST00000322712 XP32Q5T750 250 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms