RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 PRR4Q16378 134 aa13.53□□□□□ -0.24
TNFSF12-202ENST00000322272 IGKV4-1P06312 121 aa13.52□□□□□ -0.25
TNFSF12-202ENST00000322272 Q8N9L7 120 aa13.52□□□□□ -0.25
TNFSF12-202ENST00000322272 SCGB1A1P11684 91 aa13.51□□□□□ -0.25
TNFSF12-202ENST00000322272 A0A087WVE0 104 aa13.5□□□□□ -0.25
TNFSF12-202ENST00000322272 LPAP08519 4548 aa13.49□□□□□ -0.25
TNFSF12-202ENST00000322272 A8MWP4 228 aa13.49□□□□□ -0.25
TNFSF12-202ENST00000322272 K7EQZ3 153 aa13.49□□□□□ -0.25
TNFSF12-202ENST00000322272 NDUFB1O75438 58 aa13.46□□□□□ -0.26
TNFSF12-202ENST00000322272 FAM236AA0A1B0GUQ0 79 aa13.44□□□□□ -0.26
TNFSF12-202ENST00000322272 FAM236BA0A1B0GV22 79 aa13.44□□□□□ -0.26
TNFSF12-202ENST00000322272 C1orf195Q5TG92 126 aa13.42□□□□□ -0.26
TNFSF12-202ENST00000322272 PRR15Q8IV56 129 aa13.42□□□□□ -0.26
TNFSF12-202ENST00000322272 RETNLBQ9BQ08 111 aa13.42□□□□□ -0.26
TNFSF12-202ENST00000322272 A0A1B0GVX0 72 aa13.36□□□□□ -0.27
TNFSF12-202ENST00000322272 RNF213Q63HN8 5207 aa13.34□□□□□ -0.27
TNFSF12-202ENST00000322272 HCG22E2RYF7 251 aa13.34□□□□□ -0.27
TNFSF12-202ENST00000322272 IGHV6-1A0A0B4J1U7 121 aa13.31□□□□□ -0.28
TNFSF12-202ENST00000322272 ATOX1O00244 68 aa13.3□□□□□ -0.28
TNFSF12-202ENST00000322272 MMP24-AS1A0A0U1RRL7 71 aa13.27□□□□□ -0.29
TNFSF12-202ENST00000322272 C8orf17Q9NRJ1 99 aa13.27□□□□□ -0.29
TNFSF12-202ENST00000322272 WFDC13Q8IUB5 93 aa13.26□□□□□ -0.29
TNFSF12-202ENST00000322272 IGLV7-46A0A075B6I9 117 aa13.25□□□□□ -0.29
TNFSF12-202ENST00000322272 CASC2Q6XLA1 102 aa13.25□□□□□ -0.29
TNFSF12-202ENST00000322272 C8orf87E5RJ46 101 aa13.24□□□□□ -0.29
TNFSF12-202ENST00000322272 FP248Q71RG6 208 aaPredicted RBP13.23□□□□□ -0.29
TNFSF12-202ENST00000322272 ANAPC13Q9BS18 74 aa13.21□□□□□ -0.29
TNFSF12-202ENST00000322272 hDV103S1A0JD37 113 aa13.21□□□□□ -0.3
TNFSF12-202ENST00000322272 TPRXLQ17RH7 258 aa13.18□□□□□ -0.3
TNFSF12-202ENST00000322272 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
TNFSF12-202ENST00000322272 LINC00313P59037 77 aa13.17□□□□□ -0.3
TNFSF12-202ENST00000322272 NOTCH2NLQ7Z3S9 236 aa13.16□□□□□ -0.3
TNFSF12-202ENST00000322272 TMEM254Q8TBM7 123 aa13.16□□□□□ -0.3
TNFSF12-202ENST00000322272 PCP4P48539 62 aa13.12□□□□□ -0.31
TNFSF12-202ENST00000322272 MRPL34Q9BQ48 92 aaKnown RBP13.12□□□□□ -0.31
TNFSF12-202ENST00000322272 TRAV7A0A075B6U4 112 aa13.1□□□□□ -0.31
TNFSF12-202ENST00000322272 SERP2Q8N6R1 65 aa13.1□□□□□ -0.31
TNFSF12-202ENST00000322272 OCR1Q9BZK8 76 aa13.1□□□□□ -0.31
TNFSF12-202ENST00000322272 KRTAP13-3Q3SY46 172 aa13.04□□□□□ -0.32
TNFSF12-202ENST00000322272 COX7CP15954 63 aa13.02□□□□□ -0.32
TNFSF12-202ENST00000322272 MUC2Q02817 5179 aa13.02□□□□□ -0.32
TNFSF12-202ENST00000322272 KRTAP16-1A8MUX0 517 aa13.02□□□□□ -0.33
TNFSF12-202ENST00000322272 NDUFS5O43920 106 aa13.01□□□□□ -0.33
TNFSF12-202ENST00000322272 TP53AIP1Q9HCN2 124 aa12.99□□□□□ -0.33
TNFSF12-202ENST00000322272 C9orf92A6NGG3 77 aa12.98□□□□□ -0.33
TNFSF12-202ENST00000322272 UQCRQO14949 82 aa12.98□□□□□ -0.33
TNFSF12-202ENST00000322272 Q8N9P0 234 aaPredicted RBP12.96□□□□□ -0.33
TNFSF12-202ENST00000322272 MUC17Q685J3 4493 aa12.91□□□□□ -0.34
TNFSF12-202ENST00000322272 C5orf47Q569G3 176 aa12.9□□□□□ -0.34
TNFSF12-202ENST00000322272 CCDC179H3BU77 68 aa12.89□□□□□ -0.35
TNFSF12-202ENST00000322272 TRAV22A0A0B4J277 110 aa12.86□□□□□ -0.35
TNFSF12-202ENST00000322272 MP68P56378 58 aa12.85□□□□□ -0.35
TNFSF12-202ENST00000322272 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
TNFSF12-202ENST00000322272 H0Y9P7 68 aa12.84□□□□□ -0.35
TNFSF12-202ENST00000322272 C20orf166-AS1Q96NR2 134 aa12.83□□□□□ -0.36
TNFSF12-202ENST00000322272 XP32Q5T750 250 aa12.82□□□□□ -0.36
TNFSF12-202ENST00000322272 A8MUU9 505 aa12.81□□□□□ -0.36
TNFSF12-202ENST00000322272 H3BPC8 53 aa12.78□□□□□ -0.36
TNFSF12-202ENST00000322272 KLKP1Q107X0 134 aa12.77□□□□□ -0.36
TNFSF12-202ENST00000322272 A0A0U1RQV1 116 aa12.77□□□□□ -0.37
TNFSF12-202ENST00000322272 SEC61BP60468 96 aaKnown RBP12.77□□□□□ -0.37
TNFSF12-202ENST00000322272 Q75L30 129 aa12.76□□□□□ -0.37
TNFSF12-202ENST00000322272 Q5W150 140 aa12.74□□□□□ -0.37
TNFSF12-202ENST00000322272 SNURFQ9Y675 71 aa12.74□□□□□ -0.37
TNFSF12-202ENST00000322272 LINC00208Q96KT6 92 aa12.73□□□□□ -0.37
TNFSF12-202ENST00000322272 ZCCHC13Q8WW36 166 aaKnown RBP12.71□□□□□ -0.37
TNFSF12-202ENST00000322272 C1orf64Q8NEQ6 169 aa12.7□□□□□ -0.38
TNFSF12-202ENST00000322272 RPL37P61927 97 aaKnown RBP12.66□□□□□ -0.38
TNFSF12-202ENST00000322272 FAT4Q6V0I7 4981 aa12.66□□□□□ -0.38
TNFSF12-202ENST00000322272 LOC101927531A0A1B0GV80 90 aa12.65□□□□□ -0.38
TNFSF12-202ENST00000322272 NDUFC1O43677 76 aa12.65□□□□□ -0.38
TNFSF12-202ENST00000322272 CYSTM1Q9H1C7 97 aa12.64□□□□□ -0.39
TNFSF12-202ENST00000322272 KRTAP4-1Q9BYQ7 146 aa12.62□□□□□ -0.39
TNFSF12-202ENST00000322272 ATP11AUNQ6ZP68 121 aa12.6□□□□□ -0.39
TNFSF12-202ENST00000322272 PCOTHQ58A44 107 aa12.58□□□□□ -0.4
TNFSF12-202ENST00000322272 H7BZZ5 65 aa12.55□□□□□ -0.4
TNFSF12-202ENST00000322272 IGKV2-30P06310 120 aa12.55□□□□□ -0.4
TNFSF12-202ENST00000322272 CYP4F30PQ9H0H9 118 aa12.52□□□□□ -0.4
TNFSF12-202ENST00000322272 IGKV2D-30A0A075B6S6 120 aa12.51□□□□□ -0.41
TNFSF12-202ENST00000322272 C7orf65Q6ZTY9 151 aa12.49□□□□□ -0.41
TNFSF12-202ENST00000322272 TMEM258P61165 79 aa12.48□□□□□ -0.41
TNFSF12-202ENST00000322272 LCE2AQ5TA79 106 aaPredicted RBP12.45□□□□□ -0.42
TNFSF12-202ENST00000322272 FAM236DA0A1B0GTK5 79 aa12.37□□□□□ -0.43
TNFSF12-202ENST00000322272 FAM236CP0DP71 79 aa12.37□□□□□ -0.43
TNFSF12-202ENST00000322272 ATP5EP56381 51 aaPredicted RBP12.37□□□□□ -0.43
TNFSF12-202ENST00000322272 SPINK7P58062 85 aa12.37□□□□□ -0.43
TNFSF12-202ENST00000322272 SPANXA2-OT1Q8N9U9 137 aa12.37□□□□□ -0.43
TNFSF12-202ENST00000322272 HRES1P13985 223 aa12.32□□□□□ -0.44
TNFSF12-202ENST00000322272 KRTAP19-2Q3LHN2 52 aa12.26□□□□□ -0.45
TNFSF12-202ENST00000322272 LCE2CQ5TA81 110 aa12.25□□□□□ -0.45
TNFSF12-202ENST00000322272 C4orf26Q17RF5 130 aa12.16□□□□□ -0.46
TNFSF12-202ENST00000322272 DMAC1Q96GE9 116 aa12.14□□□□□ -0.47
TNFSF12-202ENST00000322272 COX6B2Q6YFQ2 88 aa12.1□□□□□ -0.47
TNFSF12-202ENST00000322272 MT1HP80294 61 aa12.09□□□□□ -0.47
TNFSF12-202ENST00000322272 A8MUN3 132 aa12.08□□□□□ -0.48
TNFSF12-202ENST00000322272 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
TNFSF12-202ENST00000322272 ACYP2P14621 99 aa12.05□□□□□ -0.48
TNFSF12-202ENST00000322272 RBM12B-AS1Q9P1G2 102 aa12.01□□□□□ -0.49
TNFSF12-202ENST00000322272 RPS28P62857 69 aaKnown RBP11.98□□□□□ -0.49
TNFSF12-202ENST00000322272 COA5Q86WW8 74 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms