RNA–Protein interactions for RNA: ENST00000320238.3

NHLH2-201, Transcript of nescient helix-loop-helix 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH2, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH2-201ENST00000320238 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
NHLH2-201ENST00000320238 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
NHLH2-201ENST00000320238 PCOTHQ58A44 107 aa11.42□□□□□ -0.58
NHLH2-201ENST00000320238 CIRBP-AS1Q8TBR5 109 aa11.42□□□□□ -0.58
NHLH2-201ENST00000320238 CDK2AP2O75956 126 aa11.4□□□□□ -0.58
NHLH2-201ENST00000320238 IGLV7-43P04211 117 aa11.4□□□□□ -0.58
NHLH2-201ENST00000320238 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.58
NHLH2-201ENST00000320238 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
NHLH2-201ENST00000320238 Q5VV11 94 aa11.4□□□□□ -0.59
NHLH2-201ENST00000320238 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
NHLH2-201ENST00000320238 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
NHLH2-201ENST00000320238 SEC61GP60059 68 aa11.37□□□□□ -0.59
NHLH2-201ENST00000320238 PMAIP1Q13794 54 aa11.37□□□□□ -0.59
NHLH2-201ENST00000320238 CHKB-CPT1BH3BT56 60 aa11.35□□□□□ -0.59
NHLH2-201ENST00000320238 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
NHLH2-201ENST00000320238 IGLV7-46A0A075B6I9 117 aa11.35□□□□□ -0.59
NHLH2-201ENST00000320238 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
NHLH2-201ENST00000320238 PRR15LQ9BU68 103 aa11.34□□□□□ -0.59
NHLH2-201ENST00000320238 COA5Q86WW8 74 aa11.33□□□□□ -0.6
NHLH2-201ENST00000320238 TP53AIP1Q9HCN2 124 aa11.33□□□□□ -0.6
NHLH2-201ENST00000320238 A8MU10 97 aa11.31□□□□□ -0.6
NHLH2-201ENST00000320238 CD164Q04900 197 aa11.3□□□□□ -0.6
NHLH2-201ENST00000320238 MRPL34Q9BQ48 92 aaKnown RBP11.3□□□□□ -0.6
NHLH2-201ENST00000320238 KRTAP10-1P60331 282 aa11.24□□□□□ -0.61
NHLH2-201ENST00000320238 Q5W150 140 aa11.22□□□□□ -0.61
NHLH2-201ENST00000320238 Q75L30 129 aa11.22□□□□□ -0.61
NHLH2-201ENST00000320238 FAT2Q9NYQ8 4349 aa11.21□□□□□ -0.61
NHLH2-201ENST00000320238 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.61
NHLH2-201ENST00000320238 PKD1P98161 4303 aa11.21□□□□□ -0.62
NHLH2-201ENST00000320238 A6NED7 52 aa11.2□□□□□ -0.62
NHLH2-201ENST00000320238 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
NHLH2-201ENST00000320238 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
NHLH2-201ENST00000320238 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
NHLH2-201ENST00000320238 SPTSSBQ8NFR3 76 aa11.16□□□□□ -0.62
NHLH2-201ENST00000320238 SPAG11AQ6PDA7 123 aa11.15□□□□□ -0.62
NHLH2-201ENST00000320238 LCA10Q71F78 164 aa11.14□□□□□ -0.63
NHLH2-201ENST00000320238 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
NHLH2-201ENST00000320238 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
NHLH2-201ENST00000320238 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
NHLH2-201ENST00000320238 PKHD1P08F94 4074 aa11.1□□□□□ -0.63
NHLH2-201ENST00000320238 HRES1P13985 223 aa11.09□□□□□ -0.63
NHLH2-201ENST00000320238 Q6ZSA8 131 aa11.08□□□□□ -0.64
NHLH2-201ENST00000320238 CDC42SE1Q9NRR8 79 aa11.06□□□□□ -0.64
NHLH2-201ENST00000320238 LINC00313P59037 77 aa11.05□□□□□ -0.64
NHLH2-201ENST00000320238 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
NHLH2-201ENST00000320238 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.64
NHLH2-201ENST00000320238 KTN1-AS1Q86SY8 53 aa11.01□□□□□ -0.65
NHLH2-201ENST00000320238 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
NHLH2-201ENST00000320238 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
NHLH2-201ENST00000320238 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
NHLH2-201ENST00000320238 SPINK7P58062 85 aa10.95□□□□□ -0.66
NHLH2-201ENST00000320238 A6NN06 94 aa10.95□□□□□ -0.66
NHLH2-201ENST00000320238 ACYP2P14621 99 aa10.91□□□□□ -0.66
NHLH2-201ENST00000320238 TYMSOSQ8TAI1 123 aa10.91□□□□□ -0.66
NHLH2-201ENST00000320238 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
NHLH2-201ENST00000320238 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
NHLH2-201ENST00000320238 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
NHLH2-201ENST00000320238 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
NHLH2-201ENST00000320238 KRTAP16-1A8MUX0 517 aa10.88□□□□□ -0.67
NHLH2-201ENST00000320238 FAT1Q14517 4588 aa10.87□□□□□ -0.67
NHLH2-201ENST00000320238 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
NHLH2-201ENST00000320238 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
NHLH2-201ENST00000320238 IGKV2-30P06310 120 aa10.85□□□□□ -0.67
NHLH2-201ENST00000320238 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
NHLH2-201ENST00000320238 C7orf65Q6ZTY9 151 aa10.8□□□□□ -0.68
NHLH2-201ENST00000320238 DMAC1Q96GE9 116 aa10.78□□□□□ -0.68
NHLH2-201ENST00000320238 SPINK1P00995 79 aa10.76□□□□□ -0.69
NHLH2-201ENST00000320238 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
NHLH2-201ENST00000320238 A0A1B0GU69 56 aa10.7□□□□□ -0.7
NHLH2-201ENST00000320238 C9orf92A6NGG3 77 aa10.66□□□□□ -0.7
NHLH2-201ENST00000320238 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
NHLH2-201ENST00000320238 KMT2CQ8NEZ4 4911 aaKnown RBP10.64□□□□□ -0.71
NHLH2-201ENST00000320238 Q8N1X5 172 aa10.62□□□□□ -0.71
NHLH2-201ENST00000320238 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
NHLH2-201ENST00000320238 SPATA8Q6RVD6 105 aa10.57□□□□□ -0.72
NHLH2-201ENST00000320238 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
NHLH2-201ENST00000320238 UQCR11O14957 56 aa10.54□□□□□ -0.72
NHLH2-201ENST00000320238 RYR2Q92736 4967 aa10.53□□□□□ -0.72
NHLH2-201ENST00000320238 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
NHLH2-201ENST00000320238 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
NHLH2-201ENST00000320238 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
NHLH2-201ENST00000320238 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
NHLH2-201ENST00000320238 RPS29P62273 56 aaKnown RBP10.47□□□□□ -0.73
NHLH2-201ENST00000320238 PKHD1L1Q86WI1 4243 aa10.46□□□□□ -0.73
NHLH2-201ENST00000320238 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
NHLH2-201ENST00000320238 C20orf166-AS1Q96NR2 134 aa10.37□□□□□ -0.75
NHLH2-201ENST00000320238 A8MUU9 505 aa10.36□□□□□ -0.75
NHLH2-201ENST00000320238 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
NHLH2-201ENST00000320238 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
NHLH2-201ENST00000320238 KRTAP3-1Q9BYR8 98 aa10.31□□□□□ -0.76
NHLH2-201ENST00000320238 DMBT1Q9UGM3 2413 aaPredicted RBP10.28□□□□□ -0.76
NHLH2-201ENST00000320238 RYR3Q15413 4870 aa10.26□□□□□ -0.77
NHLH2-201ENST00000320238 LINC01554Q52M75 96 aa10.26□□□□□ -0.77
NHLH2-201ENST00000320238 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
NHLH2-201ENST00000320238 TNXBP22105 4242 aa10.24□□□□□ -0.77
NHLH2-201ENST00000320238 HSPG2P98160 4391 aa10.23□□□□□ -0.77
NHLH2-201ENST00000320238 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
NHLH2-201ENST00000320238 Q5VSD8 79 aa10.17□□□□□ -0.78
NHLH2-201ENST00000320238 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
NHLH2-201ENST00000320238 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms