RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 KRTAP13-1Q8IUC0 172 aa9.68□□□□□ -0.86
ITGA3-202ENST00000320031 H3BS24 57 aa9.64□□□□□ -0.87
ITGA3-202ENST00000320031 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
ITGA3-202ENST00000320031 RELNP78509 3460 aa9.62□□□□□ -0.87
ITGA3-202ENST00000320031 A8MU10 97 aa9.59□□□□□ -0.87
ITGA3-202ENST00000320031 A6NN06 94 aa9.58□□□□□ -0.88
ITGA3-202ENST00000320031 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
ITGA3-202ENST00000320031 MUC3AQ02505 3323 aa9.55□□□□□ -0.88
ITGA3-202ENST00000320031 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
ITGA3-202ENST00000320031 A0A1B0GU33 70 aa9.52□□□□□ -0.89
ITGA3-202ENST00000320031 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
ITGA3-202ENST00000320031 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
ITGA3-202ENST00000320031 LAMA5O15230 3695 aa9.49□□□□□ -0.89
ITGA3-202ENST00000320031 PDZD2O15018 2839 aa9.49□□□□□ -0.89
ITGA3-202ENST00000320031 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
ITGA3-202ENST00000320031 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
ITGA3-202ENST00000320031 A0A0D9SG42 100 aa9.47□□□□□ -0.89
ITGA3-202ENST00000320031 WDFY3Q8IZQ1 3526 aa9.47□□□□□ -0.89
ITGA3-202ENST00000320031 DMDP11532 3685 aa9.46□□□□□ -0.9
ITGA3-202ENST00000320031 SEC61BP60468 96 aaKnown RBP9.45□□□□□ -0.9
ITGA3-202ENST00000320031 S4R3F8 94 aa9.45□□□□□ -0.9
ITGA3-202ENST00000320031 DCHS1Q96JQ0 3298 aa9.44□□□□□ -0.9
ITGA3-202ENST00000320031 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
ITGA3-202ENST00000320031 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
ITGA3-202ENST00000320031 CELSR1Q9NYQ6 3014 aa9.36□□□□□ -0.91
ITGA3-202ENST00000320031 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
ITGA3-202ENST00000320031 ASPMQ8IZT6 3477 aa9.34□□□□□ -0.91
ITGA3-202ENST00000320031 ZFHX4Q86UP3 3567 aa9.33□□□□□ -0.92
ITGA3-202ENST00000320031 TENM1Q9UKZ4 2725 aa9.3□□□□□ -0.92
ITGA3-202ENST00000320031 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
ITGA3-202ENST00000320031 OTOGQ6ZRI0 2925 aa9.26□□□□□ -0.93
ITGA3-202ENST00000320031 M0R2T5 61 aa9.21□□□□□ -0.94
ITGA3-202ENST00000320031 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
ITGA3-202ENST00000320031 CAMK2N1Q7Z7J9 78 aa9.17□□□□□ -0.94
ITGA3-202ENST00000320031 H1FX-AS1Q4G0G2 97 aa9.16□□□□□ -0.94
ITGA3-202ENST00000320031 R4GN34 69 aa9.16□□□□□ -0.94
ITGA3-202ENST00000320031 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
ITGA3-202ENST00000320031 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
ITGA3-202ENST00000320031 A8MUU9 505 aa9.11□□□□□ -0.95
ITGA3-202ENST00000320031 VWFP04275 2813 aa9.11□□□□□ -0.95
ITGA3-202ENST00000320031 SMG1Q96Q15 3661 aaKnown RBP9.1□□□□□ -0.95
ITGA3-202ENST00000320031 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
ITGA3-202ENST00000320031 ROMO1P60602 79 aa9.08□□□□□ -0.96
ITGA3-202ENST00000320031 CSMD1Q96PZ7 3565 aa9.08□□□□□ -0.96
ITGA3-202ENST00000320031 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
ITGA3-202ENST00000320031 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
ITGA3-202ENST00000320031 NBPF19A0A087WUL8 3843 aa9.04□□□□□ -0.96
ITGA3-202ENST00000320031 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
ITGA3-202ENST00000320031 M0QZ58 72 aa9□□□□□ -0.97
ITGA3-202ENST00000320031 LUZP6Q538Z0 58 aa8.96□□□□□ -0.98
ITGA3-202ENST00000320031 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
ITGA3-202ENST00000320031 TGP01266 2768 aa8.93□□□□□ -0.98
ITGA3-202ENST00000320031 PKD1L1Q8TDX9 2849 aa8.91□□□□□ -0.98
ITGA3-202ENST00000320031 BSNQ9UPA5 3926 aa8.89□□□□□ -0.99
ITGA3-202ENST00000320031 SPENQ96T58 3664 aaKnown RBP8.88□□□□□ -0.99
ITGA3-202ENST00000320031 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
ITGA3-202ENST00000320031 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
ITGA3-202ENST00000320031 XP32Q5T750 250 aa8.85□□□□□ -0.99
ITGA3-202ENST00000320031 SVEP1Q4LDE5 3571 aa8.82□□□□□ -1
ITGA3-202ENST00000320031 ZFHX3Q15911 3703 aa8.81□□□□□ -1
ITGA3-202ENST00000320031 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
ITGA3-202ENST00000320031 CSMD2Q7Z408 3487 aa8.75□□□□□ -1.01
ITGA3-202ENST00000320031 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
ITGA3-202ENST00000320031 NDUFAF8A1L188 74 aa8.71□□□□□ -1.01
ITGA3-202ENST00000320031 PLAC4Q8WY50 150 aa8.71□□□□□ -1.02
ITGA3-202ENST00000320031 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
ITGA3-202ENST00000320031 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
ITGA3-202ENST00000320031 H0YAA0 97 aa8.66□□□□□ -1.02
ITGA3-202ENST00000320031 TRRAPQ9Y4A5 3859 aa8.61□□□□□ -1.03
ITGA3-202ENST00000320031 CUBNO60494 3623 aa8.58□□□□□ -1.04
ITGA3-202ENST00000320031 FBN3Q75N90 2809 aa8.45□□□□□ -1.06
ITGA3-202ENST00000320031 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
ITGA3-202ENST00000320031 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
ITGA3-202ENST00000320031 TNP1P09430 55 aa8.32□□□□□ -1.08
ITGA3-202ENST00000320031 P0C880 135 aa8.29□□□□□ -1.08
ITGA3-202ENST00000320031 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
ITGA3-202ENST00000320031 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
ITGA3-202ENST00000320031 VPS13CQ709C8 3753 aa8.26□□□□□ -1.09
ITGA3-202ENST00000320031 ZNF469Q96JG9 3925 aaPredicted RBP8.18□□□□□ -1.1
ITGA3-202ENST00000320031 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
ITGA3-202ENST00000320031 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
ITGA3-202ENST00000320031 AKAP9Q99996 3911 aa8.14□□□□□ -1.11
ITGA3-202ENST00000320031 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
ITGA3-202ENST00000320031 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
ITGA3-202ENST00000320031 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
ITGA3-202ENST00000320031 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
ITGA3-202ENST00000320031 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
ITGA3-202ENST00000320031 KRTAP12-2P59991 146 aa7.96□□□□□ -1.13
ITGA3-202ENST00000320031 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
ITGA3-202ENST00000320031 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
ITGA3-202ENST00000320031 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
ITGA3-202ENST00000320031 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
ITGA3-202ENST00000320031 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
ITGA3-202ENST00000320031 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
ITGA3-202ENST00000320031 PLECQ15149 4684 aaKnown RBP7.75□□□□□ -1.17
ITGA3-202ENST00000320031 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
ITGA3-202ENST00000320031 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
ITGA3-202ENST00000320031 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
ITGA3-202ENST00000320031 DNAH5Q8TE73 4624 aa7.69□□□□□ -1.18
ITGA3-202ENST00000320031 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms