RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TMEM258P61165 79 aa9.07□□□□□ -0.96
CALR-201ENST00000316448 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
CALR-201ENST00000316448 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
CALR-201ENST00000316448 H7BZZ5 65 aa9.05□□□□□ -0.96
CALR-201ENST00000316448 Q5XG85 94 aa9.05□□□□□ -0.96
CALR-201ENST00000316448 A0A0U1RQV1 116 aa9.05□□□□□ -0.96
CALR-201ENST00000316448 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
CALR-201ENST00000316448 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
CALR-201ENST00000316448 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
CALR-201ENST00000316448 Q8N1X5 172 aa9.01□□□□□ -0.97
CALR-201ENST00000316448 NDUFC1O43677 76 aa9.01□□□□□ -0.97
CALR-201ENST00000316448 IGHV6-1A0A0B4J1U7 121 aa9□□□□□ -0.97
CALR-201ENST00000316448 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
CALR-201ENST00000316448 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
CALR-201ENST00000316448 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
CALR-201ENST00000316448 C1orf195Q5TG92 126 aa8.97□□□□□ -0.97
CALR-201ENST00000316448 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
CALR-201ENST00000316448 LIMD2Q9BT23 127 aa8.96□□□□□ -0.97
CALR-201ENST00000316448 SPINK1P00995 79 aa8.95□□□□□ -0.98
CALR-201ENST00000316448 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
CALR-201ENST00000316448 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
CALR-201ENST00000316448 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
CALR-201ENST00000316448 TNXBP22105 4242 aa8.94□□□□□ -0.98
CALR-201ENST00000316448 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
CALR-201ENST00000316448 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
CALR-201ENST00000316448 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
CALR-201ENST00000316448 MRPL34Q9BQ48 92 aaKnown RBP8.92□□□□□ -0.98
CALR-201ENST00000316448 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
CALR-201ENST00000316448 SPAG11AQ6PDA7 123 aa8.91□□□□□ -0.98
CALR-201ENST00000316448 MP68P56378 58 aa8.9□□□□□ -0.98
CALR-201ENST00000316448 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
CALR-201ENST00000316448 C8orf87E5RJ46 101 aa8.9□□□□□ -0.99
CALR-201ENST00000316448 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.99
CALR-201ENST00000316448 BIRC6Q9NR09 4857 aa8.89□□□□□ -0.99
CALR-201ENST00000316448 H0Y9P7 68 aa8.89□□□□□ -0.99
CALR-201ENST00000316448 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
CALR-201ENST00000316448 H3BPC8 53 aa8.88□□□□□ -0.99
CALR-201ENST00000316448 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
CALR-201ENST00000316448 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
CALR-201ENST00000316448 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
CALR-201ENST00000316448 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
CALR-201ENST00000316448 LINC00208Q96KT6 92 aa8.85□□□□□ -0.99
CALR-201ENST00000316448 NDUFS5O43920 106 aa8.82□□□□□ -1
CALR-201ENST00000316448 LINC00313P59037 77 aa8.82□□□□□ -1
CALR-201ENST00000316448 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
CALR-201ENST00000316448 RETNLBQ9BQ08 111 aa8.8□□□□□ -1
CALR-201ENST00000316448 OXTP01178 125 aa8.79□□□□□ -1
CALR-201ENST00000316448 HERC2O95714 4834 aa8.79□□□□□ -1
CALR-201ENST00000316448 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
CALR-201ENST00000316448 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
CALR-201ENST00000316448 SERP1Q9Y6X1 66 aa8.78□□□□□ -1
CALR-201ENST00000316448 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
CALR-201ENST00000316448 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
CALR-201ENST00000316448 ABCA13Q86UQ4 5058 aa8.74□□□□□ -1.01
CALR-201ENST00000316448 Q5W150 140 aa8.73□□□□□ -1.01
CALR-201ENST00000316448 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.02
CALR-201ENST00000316448 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
CALR-201ENST00000316448 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
CALR-201ENST00000316448 C9orf92A6NGG3 77 aa8.65□□□□□ -1.02
CALR-201ENST00000316448 PRR4Q16378 134 aa8.64□□□□□ -1.03
CALR-201ENST00000316448 PCOTHQ58A44 107 aa8.62□□□□□ -1.03
CALR-201ENST00000316448 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
CALR-201ENST00000316448 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
CALR-201ENST00000316448 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
CALR-201ENST00000316448 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
CALR-201ENST00000316448 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
CALR-201ENST00000316448 A8MUU9 505 aa8.52□□□□□ -1.05
CALR-201ENST00000316448 J3QL48 77 aa8.48□□□□□ -1.05
CALR-201ENST00000316448 HRES1P13985 223 aa8.46□□□□□ -1.05
CALR-201ENST00000316448 COA5Q86WW8 74 aa8.45□□□□□ -1.06
CALR-201ENST00000316448 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
CALR-201ENST00000316448 XP32Q5T750 250 aa8.43□□□□□ -1.06
CALR-201ENST00000316448 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
CALR-201ENST00000316448 Q75L30 129 aa8.42□□□□□ -1.06
CALR-201ENST00000316448 C7orf65Q6ZTY9 151 aa8.41□□□□□ -1.06
CALR-201ENST00000316448 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
CALR-201ENST00000316448 LPAP08519 4548 aa8.39□□□□□ -1.07
CALR-201ENST00000316448 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
CALR-201ENST00000316448 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
CALR-201ENST00000316448 Q1T7F1 81 aa8.37□□□□□ -1.07
CALR-201ENST00000316448 RPL37P61927 97 aaKnown RBP8.36□□□□□ -1.07
CALR-201ENST00000316448 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
CALR-201ENST00000316448 ACYP2P14621 99 aa8.34□□□□□ -1.07
CALR-201ENST00000316448 LRP2P98164 4655 aa8.32□□□□□ -1.08
CALR-201ENST00000316448 V9GYY9 64 aa8.29□□□□□ -1.08
CALR-201ENST00000316448 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
CALR-201ENST00000316448 SPINK7P58062 85 aa8.26□□□□□ -1.09
CALR-201ENST00000316448 HERC1Q15751 4861 aa8.24□□□□□ -1.09
CALR-201ENST00000316448 A8MUN3 132 aa8.23□□□□□ -1.09
CALR-201ENST00000316448 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
CALR-201ENST00000316448 PSPHP1O15172 72 aa8.19□□□□□ -1.1
CALR-201ENST00000316448 LINC01558Q9Y6Z2 57 aa8.17□□□□□ -1.1
CALR-201ENST00000316448 Q5VV11 94 aa8.15□□□□□ -1.1
CALR-201ENST00000316448 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.11
CALR-201ENST00000316448 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
CALR-201ENST00000316448 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
CALR-201ENST00000316448 COX6B2Q6YFQ2 88 aa8.09□□□□□ -1.11
CALR-201ENST00000316448 KRTAP4-1Q9BYQ7 146 aa8.07□□□□□ -1.12
CALR-201ENST00000316448 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
CALR-201ENST00000316448 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 300.5 ms