RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 USP34Q70CQ2 3546 aa8□□□□□ -1.13
SPAST-201ENST00000315285 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
SPAST-201ENST00000315285 Q5VSD8 79 aa7.96□□□□□ -1.14
SPAST-201ENST00000315285 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SPAST-201ENST00000315285 KRTAP13-1Q8IUC0 172 aa7.95□□□□□ -1.14
SPAST-201ENST00000315285 NF1P21359 2839 aa7.93□□□□□ -1.14
SPAST-201ENST00000315285 FBN2P35556 2912 aa7.92□□□□□ -1.14
SPAST-201ENST00000315285 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
SPAST-201ENST00000315285 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
SPAST-201ENST00000315285 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
SPAST-201ENST00000315285 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
SPAST-201ENST00000315285 TENM4Q6N022 2769 aa7.87□□□□□ -1.15
SPAST-201ENST00000315285 R4GN34 69 aa7.87□□□□□ -1.15
SPAST-201ENST00000315285 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
SPAST-201ENST00000315285 MYO15AQ9UKN7 3530 aa7.84□□□□□ -1.15
SPAST-201ENST00000315285 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
SPAST-201ENST00000315285 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
SPAST-201ENST00000315285 ROMO1P60602 79 aa7.82□□□□□ -1.16
SPAST-201ENST00000315285 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
SPAST-201ENST00000315285 M0R2T5 61 aa7.8□□□□□ -1.16
SPAST-201ENST00000315285 A6NN06 94 aa7.76□□□□□ -1.17
SPAST-201ENST00000315285 M0QZ58 72 aa7.74□□□□□ -1.17
SPAST-201ENST00000315285 MXRA5Q9NR99 2828 aa7.74□□□□□ -1.17
SPAST-201ENST00000315285 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
SPAST-201ENST00000315285 A8MU10 97 aa7.72□□□□□ -1.17
SPAST-201ENST00000315285 H3BS24 57 aa7.7□□□□□ -1.18
SPAST-201ENST00000315285 RELNP78509 3460 aa7.62□□□□□ -1.19
SPAST-201ENST00000315285 WDFY3Q8IZQ1 3526 aa7.6□□□□□ -1.19
SPAST-201ENST00000315285 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
SPAST-201ENST00000315285 TENM3Q9P273 2699 aa7.58□□□□□ -1.2
SPAST-201ENST00000315285 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
SPAST-201ENST00000315285 A8MUU9 505 aa7.56□□□□□ -1.2
SPAST-201ENST00000315285 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
SPAST-201ENST00000315285 DCHS1Q96JQ0 3298 aa7.53□□□□□ -1.2
SPAST-201ENST00000315285 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
SPAST-201ENST00000315285 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
SPAST-201ENST00000315285 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
SPAST-201ENST00000315285 ZFHX4Q86UP3 3567 aa7.45□□□□□ -1.22
SPAST-201ENST00000315285 LAMA5O15230 3695 aa7.44□□□□□ -1.22
SPAST-201ENST00000315285 KRTAP21-3Q3LHN1 58 aa7.43□□□□□ -1.22
SPAST-201ENST00000315285 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
SPAST-201ENST00000315285 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
SPAST-201ENST00000315285 PDZD2O15018 2839 aa7.37□□□□□ -1.23
SPAST-201ENST00000315285 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
SPAST-201ENST00000315285 TGP01266 2768 aa7.36□□□□□ -1.23
SPAST-201ENST00000315285 TENM2Q9NT68 2774 aa7.35□□□□□ -1.23
SPAST-201ENST00000315285 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
SPAST-201ENST00000315285 DMDP11532 3685 aa7.31□□□□□ -1.24
SPAST-201ENST00000315285 XP32Q5T750 250 aa7.31□□□□□ -1.24
SPAST-201ENST00000315285 CSMD1Q96PZ7 3565 aa7.29□□□□□ -1.24
SPAST-201ENST00000315285 MUC3AQ02505 3323 aa7.28□□□□□ -1.24
SPAST-201ENST00000315285 H0YAA0 97 aa7.28□□□□□ -1.24
SPAST-201ENST00000315285 VWFP04275 2813 aa7.27□□□□□ -1.25
SPAST-201ENST00000315285 FBN1P35555 2871 aaKnown RBP7.26□□□□□ -1.25
SPAST-201ENST00000315285 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
SPAST-201ENST00000315285 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
SPAST-201ENST00000315285 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
SPAST-201ENST00000315285 TNP1P09430 55 aa7.16□□□□□ -1.26
SPAST-201ENST00000315285 OTOGQ6ZRI0 2925 aa7.16□□□□□ -1.26
SPAST-201ENST00000315285 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
SPAST-201ENST00000315285 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
SPAST-201ENST00000315285 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
SPAST-201ENST00000315285 SVEP1Q4LDE5 3571 aa7.07□□□□□ -1.28
SPAST-201ENST00000315285 P0C880 135 aa7.07□□□□□ -1.28
SPAST-201ENST00000315285 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
SPAST-201ENST00000315285 A0A1B0GVY2 172 aa7□□□□□ -1.29
SPAST-201ENST00000315285 KRTAP10-8P60410 259 aa7□□□□□ -1.29
SPAST-201ENST00000315285 ZFHX3Q15911 3703 aa6.98□□□□□ -1.29
SPAST-201ENST00000315285 CUBNO60494 3623 aa6.98□□□□□ -1.29
SPAST-201ENST00000315285 FBN3Q75N90 2809 aa6.96□□□□□ -1.3
SPAST-201ENST00000315285 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
SPAST-201ENST00000315285 CSMD2Q7Z408 3487 aa6.91□□□□□ -1.3
SPAST-201ENST00000315285 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
SPAST-201ENST00000315285 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
SPAST-201ENST00000315285 BSNQ9UPA5 3926 aa6.84□□□□□ -1.31
SPAST-201ENST00000315285 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
SPAST-201ENST00000315285 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
SPAST-201ENST00000315285 MEGF8Q7Z7M0 2845 aa6.82□□□□□ -1.32
SPAST-201ENST00000315285 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
SPAST-201ENST00000315285 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
SPAST-201ENST00000315285 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
SPAST-201ENST00000315285 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
SPAST-201ENST00000315285 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
SPAST-201ENST00000315285 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
SPAST-201ENST00000315285 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
SPAST-201ENST00000315285 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
SPAST-201ENST00000315285 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
SPAST-201ENST00000315285 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
SPAST-201ENST00000315285 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
SPAST-201ENST00000315285 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
SPAST-201ENST00000315285 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SPAST-201ENST00000315285 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
SPAST-201ENST00000315285 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
SPAST-201ENST00000315285 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
SPAST-201ENST00000315285 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
SPAST-201ENST00000315285 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
SPAST-201ENST00000315285 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
SPAST-201ENST00000315285 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
SPAST-201ENST00000315285 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
SPAST-201ENST00000315285 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms