RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ATRQ13535 2644 aa5.3□□□□□ -1.56
BDNF-201ENST00000314915 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
BDNF-201ENST00000314915 CUBNO60494 3623 aa5.3□□□□□ -1.56
BDNF-201ENST00000314915 FLNAP21333 2647 aaKnown RBP5.29□□□□□ -1.56
BDNF-201ENST00000314915 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
BDNF-201ENST00000314915 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
BDNF-201ENST00000314915 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
BDNF-201ENST00000314915 H3BNG1 76 aa5.27□□□□□ -1.57
BDNF-201ENST00000314915 SPINK1P00995 79 aa5.27□□□□□ -1.57
BDNF-201ENST00000314915 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
BDNF-201ENST00000314915 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
BDNF-201ENST00000314915 SMR3AQ99954 134 aa5.26□□□□□ -1.57
BDNF-201ENST00000314915 FBN2P35556 2912 aa5.26□□□□□ -1.57
BDNF-201ENST00000314915 CELSR2Q9HCU4 2923 aa5.24□□□□□ -1.57
BDNF-201ENST00000314915 MXRA5Q9NR99 2828 aa5.23□□□□□ -1.57
BDNF-201ENST00000314915 STAB1Q9NY15 2570 aa5.23□□□□□ -1.57
BDNF-201ENST00000314915 NF1P21359 2839 aa5.22□□□□□ -1.57
BDNF-201ENST00000314915 COL6A5A8TX70 2615 aa5.2□□□□□ -1.58
BDNF-201ENST00000314915 BSNQ9UPA5 3926 aa5.2□□□□□ -1.58
BDNF-201ENST00000314915 HIVEP1P15822 2718 aa5.19□□□□□ -1.58
BDNF-201ENST00000314915 COX6B2Q6YFQ2 88 aa5.19□□□□□ -1.58
BDNF-201ENST00000314915 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
BDNF-201ENST00000314915 CSMD2Q7Z408 3487 aa5.18□□□□□ -1.58
BDNF-201ENST00000314915 C14orf177Q52M58 125 aa5.17□□□□□ -1.58
BDNF-201ENST00000314915 NIPBLQ6KC79 2804 aaeCLIP5.16□□□□□ -1.58
BDNF-201ENST00000314915 KRTAP10-3P60369 221 aa5.16□□□□□ -1.58
BDNF-201ENST00000314915 TYMSOSQ8TAI1 123 aa5.15□□□□□ -1.59
BDNF-201ENST00000314915 UBE2DNLQ8IWF7 75 aa5.14□□□□□ -1.59
BDNF-201ENST00000314915 NBEAL1Q6ZS30 2694 aa5.14□□□□□ -1.59
BDNF-201ENST00000314915 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
BDNF-201ENST00000314915 AKAP9Q99996 3911 aa5.14□□□□□ -1.59
BDNF-201ENST00000314915 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
BDNF-201ENST00000314915 MGAM2Q2M2H8 2515 aa5.13□□□□□ -1.59
BDNF-201ENST00000314915 NBPF19A0A087WUL8 3843 aa5.09□□□□□ -1.6
BDNF-201ENST00000314915 KRTAP1-3Q8IUG1 177 aa5.08□□□□□ -1.6
BDNF-201ENST00000314915 KRTAP13-1Q8IUC0 172 aa5.07□□□□□ -1.6
BDNF-201ENST00000314915 Q8N1X5 172 aa5.06□□□□□ -1.6
BDNF-201ENST00000314915 VPS13CQ709C8 3753 aa5.06□□□□□ -1.6
BDNF-201ENST00000314915 WWC2-AS2Q96NR7 200 aa5.06□□□□□ -1.6
BDNF-201ENST00000314915 NSD1Q96L73 2696 aaPredicted RBP5.03□□□□□ -1.6
BDNF-201ENST00000314915 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
BDNF-201ENST00000314915 KRTAP1-1Q07627 177 aa5.01□□□□□ -1.61
BDNF-201ENST00000314915 PDZD2O15018 2839 aa4.98□□□□□ -1.61
BDNF-201ENST00000314915 NOTCH1P46531 2555 aa4.97□□□□□ -1.61
BDNF-201ENST00000314915 KRTAP10-11P60412 298 aa4.96□□□□□ -1.62
BDNF-201ENST00000314915 APLNQ9ULZ1 77 aa4.95□□□□□ -1.62
BDNF-201ENST00000314915 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
BDNF-201ENST00000314915 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
BDNF-201ENST00000314915 A0A0D9SG42 100 aa4.92□□□□□ -1.62
BDNF-201ENST00000314915 XP32Q5T750 250 aa4.92□□□□□ -1.62
BDNF-201ENST00000314915 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
BDNF-201ENST00000314915 S4R3F8 94 aa4.9□□□□□ -1.62
BDNF-201ENST00000314915 VWFP04275 2813 aa4.89□□□□□ -1.63
BDNF-201ENST00000314915 PKD1L1Q8TDX9 2849 aa4.89□□□□□ -1.63
BDNF-201ENST00000314915 SPACA4Q8TDM5 124 aa4.87□□□□□ -1.63
BDNF-201ENST00000314915 FBN1P35555 2871 aaKnown RBP4.84□□□□□ -1.63
BDNF-201ENST00000314915 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.64
BDNF-201ENST00000314915 TENM3Q9P273 2699 aa4.84□□□□□ -1.64
BDNF-201ENST00000314915 Q6ZRN7 208 aaPredicted RBP4.83□□□□□ -1.64
BDNF-201ENST00000314915 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
BDNF-201ENST00000314915 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
BDNF-201ENST00000314915 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
BDNF-201ENST00000314915 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
BDNF-201ENST00000314915 R4GN34 69 aa4.77□□□□□ -1.65
BDNF-201ENST00000314915 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
BDNF-201ENST00000314915 MEGF8Q7Z7M0 2845 aa4.76□□□□□ -1.65
BDNF-201ENST00000314915 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
BDNF-201ENST00000314915 STAB2Q8WWQ8 2551 aa4.75□□□□□ -1.65
BDNF-201ENST00000314915 TENM1Q9UKZ4 2725 aa4.75□□□□□ -1.65
BDNF-201ENST00000314915 CSMD3Q7Z407 3707 aa4.73□□□□□ -1.65
BDNF-201ENST00000314915 INE1O15225 51 aa4.71□□□□□ -1.65
BDNF-201ENST00000314915 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
BDNF-201ENST00000314915 TGP01266 2768 aa4.69□□□□□ -1.66
BDNF-201ENST00000314915 ZNF469Q96JG9 3925 aaPredicted RBP4.68□□□□□ -1.66
BDNF-201ENST00000314915 COL7A1Q02388 2944 aa4.68□□□□□ -1.66
BDNF-201ENST00000314915 FBN3Q75N90 2809 aa4.65□□□□□ -1.66
BDNF-201ENST00000314915 DNAH1Q9P2D7 4330 aa4.64□□□□□ -1.67
BDNF-201ENST00000314915 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
BDNF-201ENST00000314915 KRTAP13-2Q52LG2 175 aa4.63□□□□□ -1.67
BDNF-201ENST00000314915 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
BDNF-201ENST00000314915 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
BDNF-201ENST00000314915 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
BDNF-201ENST00000314915 ANK3Q12955 4377 aaKnown RBP4.6□□□□□ -1.67
BDNF-201ENST00000314915 M0QZ58 72 aa4.58□□□□□ -1.68
BDNF-201ENST00000314915 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
BDNF-201ENST00000314915 FRAS1Q86XX4 4008 aa4.54□□□□□ -1.68
BDNF-201ENST00000314915 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
BDNF-201ENST00000314915 DNHD1Q96M86 4753 aa4.51□□□□□ -1.69
BDNF-201ENST00000314915 DNAH8Q96JB1 4490 aa4.48□□□□□ -1.69
BDNF-201ENST00000314915 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
BDNF-201ENST00000314915 RPS29P62273 56 aaKnown RBP4.47□□□□□ -1.69
BDNF-201ENST00000314915 DNAH10Q8IVF4 4471 aa4.46□□□□□ -1.69
BDNF-201ENST00000314915 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
BDNF-201ENST00000314915 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
BDNF-201ENST00000314915 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
BDNF-201ENST00000314915 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
BDNF-201ENST00000314915 KRTAP10-1P60331 282 aa4.39□□□□□ -1.71
BDNF-201ENST00000314915 ANK2Q01484 3957 aa4.37□□□□□ -1.71
BDNF-201ENST00000314915 LYSTQ99698 3801 aa4.34□□□□□ -1.71
BDNF-201ENST00000314915 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms