RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FAT1Q14517 4588 aa9.6□□□□□ -0.87
CLCF1-201ENST00000312438 hDV103S1A0JD37 113 aa9.59□□□□□ -0.88
CLCF1-201ENST00000312438 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
CLCF1-201ENST00000312438 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
CLCF1-201ENST00000312438 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
CLCF1-201ENST00000312438 KLKP1Q107X0 134 aa9.51□□□□□ -0.89
CLCF1-201ENST00000312438 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
CLCF1-201ENST00000312438 TMEM254Q8TBM7 123 aa9.51□□□□□ -0.89
CLCF1-201ENST00000312438 Q8N1X5 172 aa9.5□□□□□ -0.89
CLCF1-201ENST00000312438 MRPL34Q9BQ48 92 aaKnown RBP9.49□□□□□ -0.89
CLCF1-201ENST00000312438 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
CLCF1-201ENST00000312438 LINC00313P59037 77 aa9.47□□□□□ -0.89
CLCF1-201ENST00000312438 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
CLCF1-201ENST00000312438 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
CLCF1-201ENST00000312438 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
CLCF1-201ENST00000312438 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
CLCF1-201ENST00000312438 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
CLCF1-201ENST00000312438 HSPG2P98160 4391 aa9.45□□□□□ -0.9
CLCF1-201ENST00000312438 NDUFS5O43920 106 aa9.42□□□□□ -0.9
CLCF1-201ENST00000312438 MP68P56378 58 aa9.42□□□□□ -0.9
CLCF1-201ENST00000312438 RYR1P21817 5038 aa9.42□□□□□ -0.9
CLCF1-201ENST00000312438 NDUFC1O43677 76 aa9.41□□□□□ -0.9
CLCF1-201ENST00000312438 H7BZZ5 65 aa9.38□□□□□ -0.91
CLCF1-201ENST00000312438 H0Y9P7 68 aa9.38□□□□□ -0.91
CLCF1-201ENST00000312438 H3BPC8 53 aa9.38□□□□□ -0.91
CLCF1-201ENST00000312438 TMEM258P61165 79 aa9.38□□□□□ -0.91
CLCF1-201ENST00000312438 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
CLCF1-201ENST00000312438 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
CLCF1-201ENST00000312438 KIAA1109Q2LD37 5005 aa9.35□□□□□ -0.91
CLCF1-201ENST00000312438 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
CLCF1-201ENST00000312438 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
CLCF1-201ENST00000312438 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
CLCF1-201ENST00000312438 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
CLCF1-201ENST00000312438 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
CLCF1-201ENST00000312438 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CLCF1-201ENST00000312438 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
CLCF1-201ENST00000312438 Q5W150 140 aa9.26□□□□□ -0.93
CLCF1-201ENST00000312438 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
CLCF1-201ENST00000312438 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
CLCF1-201ENST00000312438 OXTP01178 125 aa9.25□□□□□ -0.93
CLCF1-201ENST00000312438 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
CLCF1-201ENST00000312438 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
CLCF1-201ENST00000312438 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
CLCF1-201ENST00000312438 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
CLCF1-201ENST00000312438 ATP5EP56381 51 aaPredicted RBP9.21□□□□□ -0.94
CLCF1-201ENST00000312438 KRTAP4-5Q9BYR2 181 aa9.21□□□□□ -0.94
CLCF1-201ENST00000312438 C9orf92A6NGG3 77 aa9.2□□□□□ -0.94
CLCF1-201ENST00000312438 FP248Q71RG6 208 aaPredicted RBP9.2□□□□□ -0.94
CLCF1-201ENST00000312438 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
CLCF1-201ENST00000312438 TNXBP22105 4242 aa9.18□□□□□ -0.94
CLCF1-201ENST00000312438 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
CLCF1-201ENST00000312438 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.95
CLCF1-201ENST00000312438 A8MUU9 505 aa9.14□□□□□ -0.95
CLCF1-201ENST00000312438 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
CLCF1-201ENST00000312438 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
CLCF1-201ENST00000312438 CYP4F30PQ9H0H9 118 aa9.12□□□□□ -0.95
CLCF1-201ENST00000312438 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
CLCF1-201ENST00000312438 DMBT1Q9UGM3 2413 aaPredicted RBP9.11□□□□□ -0.95
CLCF1-201ENST00000312438 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
CLCF1-201ENST00000312438 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
CLCF1-201ENST00000312438 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
CLCF1-201ENST00000312438 MYCBP2O75592 4640 aa9.06□□□□□ -0.96
CLCF1-201ENST00000312438 PRR4Q16378 134 aa9.05□□□□□ -0.96
CLCF1-201ENST00000312438 Q75L30 129 aa9.05□□□□□ -0.96
CLCF1-201ENST00000312438 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
CLCF1-201ENST00000312438 HRES1P13985 223 aa8.98□□□□□ -0.97
CLCF1-201ENST00000312438 J3QL48 77 aa8.97□□□□□ -0.97
CLCF1-201ENST00000312438 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
CLCF1-201ENST00000312438 BIRC6Q9NR09 4857 aa8.96□□□□□ -0.97
CLCF1-201ENST00000312438 XP32Q5T750 250 aa8.96□□□□□ -0.98
CLCF1-201ENST00000312438 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
CLCF1-201ENST00000312438 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
CLCF1-201ENST00000312438 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
CLCF1-201ENST00000312438 HERC2O95714 4834 aa8.89□□□□□ -0.99
CLCF1-201ENST00000312438 SMIM26A0A096LP01 95 aa8.88□□□□□ -0.99
CLCF1-201ENST00000312438 SPINK7P58062 85 aa8.88□□□□□ -0.99
CLCF1-201ENST00000312438 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
CLCF1-201ENST00000312438 ACYP2P14621 99 aa8.85□□□□□ -0.99
CLCF1-201ENST00000312438 COA5Q86WW8 74 aa8.84□□□□□ -0.99
CLCF1-201ENST00000312438 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
CLCF1-201ENST00000312438 C4orf26Q17RF5 130 aa8.78□□□□□ -1
CLCF1-201ENST00000312438 A8MUN3 132 aa8.75□□□□□ -1.01
CLCF1-201ENST00000312438 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
CLCF1-201ENST00000312438 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
CLCF1-201ENST00000312438 Q1T7F1 81 aa8.68□□□□□ -1.02
CLCF1-201ENST00000312438 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
CLCF1-201ENST00000312438 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
CLCF1-201ENST00000312438 V9GYY9 64 aa8.66□□□□□ -1.02
CLCF1-201ENST00000312438 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
CLCF1-201ENST00000312438 LPAP08519 4548 aa8.58□□□□□ -1.04
CLCF1-201ENST00000312438 LRP2P98164 4655 aa8.56□□□□□ -1.04
CLCF1-201ENST00000312438 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
CLCF1-201ENST00000312438 PSPHP1O15172 72 aa8.51□□□□□ -1.05
CLCF1-201ENST00000312438 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
CLCF1-201ENST00000312438 PCLOQ9Y6V0 5065 aa8.49□□□□□ -1.05
CLCF1-201ENST00000312438 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
CLCF1-201ENST00000312438 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
CLCF1-201ENST00000312438 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
CLCF1-201ENST00000312438 Q5VV11 94 aa8.43□□□□□ -1.06
CLCF1-201ENST00000312438 KRTAP4-1Q9BYQ7 146 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms