RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 KRTAP4-1Q9BYQ7 146 aa11.85□□□□□ -0.51
SNUPN-201ENST00000308588 LINC00313P59037 77 aa11.84□□□□□ -0.51
SNUPN-201ENST00000308588 NOTCH2NLQ7Z3S9 236 aa11.83□□□□□ -0.52
SNUPN-201ENST00000308588 IGHV6-1A0A0B4J1U7 121 aa11.82□□□□□ -0.52
SNUPN-201ENST00000308588 Q75L30 129 aa11.82□□□□□ -0.52
SNUPN-201ENST00000308588 A0A1B0GVX0 72 aa11.81□□□□□ -0.52
SNUPN-201ENST00000308588 ETDBQ3ZM63 59 aa11.81□□□□□ -0.52
SNUPN-201ENST00000308588 C20orf166-AS1Q96NR2 134 aa11.8□□□□□ -0.52
SNUPN-201ENST00000308588 KRTAP16-1A8MUX0 517 aa11.78□□□□□ -0.52
SNUPN-201ENST00000308588 A8MUU9 505 aa11.77□□□□□ -0.52
SNUPN-201ENST00000308588 A8MWP4 228 aa11.76□□□□□ -0.53
SNUPN-201ENST00000308588 C8orf87E5RJ46 101 aa11.75□□□□□ -0.53
SNUPN-201ENST00000308588 NDUFB1O75438 58 aa11.75□□□□□ -0.53
SNUPN-201ENST00000308588 IGKV3D-7A0A0C4DH55 119 aa11.73□□□□□ -0.53
SNUPN-201ENST00000308588 Q6ZVQ6 151 aa11.73□□□□□ -0.53
SNUPN-201ENST00000308588 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
SNUPN-201ENST00000308588 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
SNUPN-201ENST00000308588 PRR15Q8IV56 129 aa11.69□□□□□ -0.54
SNUPN-201ENST00000308588 BPY2O14599 106 aa11.66□□□□□ -0.54
SNUPN-201ENST00000308588 C8orf17Q9NRJ1 99 aa11.66□□□□□ -0.54
SNUPN-201ENST00000308588 A0A0U1RQV1 116 aa11.65□□□□□ -0.55
SNUPN-201ENST00000308588 UBL5Q9BZL1 73 aa11.64□□□□□ -0.55
SNUPN-201ENST00000308588 FAT4Q6V0I7 4981 aa11.62□□□□□ -0.55
SNUPN-201ENST00000308588 K7EQZ3 153 aa11.62□□□□□ -0.55
SNUPN-201ENST00000308588 MMP24-AS1A0A0U1RRL7 71 aa11.57□□□□□ -0.56
SNUPN-201ENST00000308588 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
SNUPN-201ENST00000308588 Q8N9L7 120 aa11.55□□□□□ -0.56
SNUPN-201ENST00000308588 KRTAP19-2Q3LHN2 52 aa11.5□□□□□ -0.57
SNUPN-201ENST00000308588 TMEM254Q8TBM7 123 aa11.5□□□□□ -0.57
SNUPN-201ENST00000308588 hDV103S1A0JD37 113 aa11.49□□□□□ -0.57
SNUPN-201ENST00000308588 ACYP1P07311 99 aa11.49□□□□□ -0.57
SNUPN-201ENST00000308588 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
SNUPN-201ENST00000308588 FAM240AA0A1B0GVK7 77 aa11.48□□□□□ -0.57
SNUPN-201ENST00000308588 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
SNUPN-201ENST00000308588 ZCCHC13Q8WW36 166 aaKnown RBP11.45□□□□□ -0.58
SNUPN-201ENST00000308588 CXCL6P80162 114 aa11.44□□□□□ -0.58
SNUPN-201ENST00000308588 LCE2AQ5TA79 106 aaPredicted RBP11.44□□□□□ -0.58
SNUPN-201ENST00000308588 WFDC13Q8IUB5 93 aa11.42□□□□□ -0.58
SNUPN-201ENST00000308588 CASC2Q6XLA1 102 aa11.4□□□□□ -0.58
SNUPN-201ENST00000308588 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
SNUPN-201ENST00000308588 NDUFS5O43920 106 aa11.35□□□□□ -0.59
SNUPN-201ENST00000308588 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
SNUPN-201ENST00000308588 COX6B2Q6YFQ2 88 aa11.29□□□□□ -0.6
SNUPN-201ENST00000308588 SPINK7P58062 85 aa11.28□□□□□ -0.6
SNUPN-201ENST00000308588 HRES1P13985 223 aa11.27□□□□□ -0.61
SNUPN-201ENST00000308588 MT1HP80294 61 aa11.25□□□□□ -0.61
SNUPN-201ENST00000308588 Q5W150 140 aa11.25□□□□□ -0.61
SNUPN-201ENST00000308588 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
SNUPN-201ENST00000308588 J3QR89 54 aa11.24□□□□□ -0.61
SNUPN-201ENST00000308588 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
SNUPN-201ENST00000308588 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
SNUPN-201ENST00000308588 FLGP20930 4061 aaPredicted RBP11.17□□□□□ -0.62
SNUPN-201ENST00000308588 RBM12B-AS1Q9P1G2 102 aa11.15□□□□□ -0.62
SNUPN-201ENST00000308588 K7ERU9 68 aa11.14□□□□□ -0.63
SNUPN-201ENST00000308588 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
SNUPN-201ENST00000308588 FAM236DA0A1B0GTK5 79 aa11.1□□□□□ -0.63
SNUPN-201ENST00000308588 FAM236CP0DP71 79 aa11.1□□□□□ -0.63
SNUPN-201ENST00000308588 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
SNUPN-201ENST00000308588 A0A087WVE0 104 aa11.09□□□□□ -0.63
SNUPN-201ENST00000308588 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
SNUPN-201ENST00000308588 C7orf65Q6ZTY9 151 aa11.07□□□□□ -0.64
SNUPN-201ENST00000308588 M0R2T5 61 aa11.04□□□□□ -0.64
SNUPN-201ENST00000308588 KRTAP10-6P60371 365 aaPredicted RBP10.97□□□□□ -0.65
SNUPN-201ENST00000308588 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
SNUPN-201ENST00000308588 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
SNUPN-201ENST00000308588 UQCRQO14949 82 aa10.91□□□□□ -0.66
SNUPN-201ENST00000308588 MT-ATP8P03928 68 aa10.87□□□□□ -0.67
SNUPN-201ENST00000308588 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
SNUPN-201ENST00000308588 OCR1Q9BZK8 76 aa10.84□□□□□ -0.67
SNUPN-201ENST00000308588 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
SNUPN-201ENST00000308588 IMUPQ9GZP8 106 aa10.84□□□□□ -0.67
SNUPN-201ENST00000308588 H0Y9P7 68 aa10.82□□□□□ -0.68
SNUPN-201ENST00000308588 H1FX-AS1Q4G0G2 97 aa10.82□□□□□ -0.68
SNUPN-201ENST00000308588 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
SNUPN-201ENST00000308588 ATOX1O00244 68 aa10.79□□□□□ -0.68
SNUPN-201ENST00000308588 KRTAP3-1Q9BYR8 98 aa10.76□□□□□ -0.69
SNUPN-201ENST00000308588 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
SNUPN-201ENST00000308588 KRTAP9-8Q9BYQ0 159 aa10.74□□□□□ -0.69
SNUPN-201ENST00000308588 KRTAP9-2Q9BYQ4 174 aa10.73□□□□□ -0.69
SNUPN-201ENST00000308588 C1orf64Q8NEQ6 169 aa10.72□□□□□ -0.69
SNUPN-201ENST00000308588 LINC00208Q96KT6 92 aa10.69□□□□□ -0.7
SNUPN-201ENST00000308588 MP68P56378 58 aa10.68□□□□□ -0.7
SNUPN-201ENST00000308588 C5orf47Q569G3 176 aa10.68□□□□□ -0.7
SNUPN-201ENST00000308588 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
SNUPN-201ENST00000308588 FAM236AA0A1B0GUQ0 79 aa10.64□□□□□ -0.71
SNUPN-201ENST00000308588 FAM236BA0A1B0GV22 79 aa10.64□□□□□ -0.71
SNUPN-201ENST00000308588 MT2AP02795 61 aa10.61□□□□□ -0.71
SNUPN-201ENST00000308588 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
SNUPN-201ENST00000308588 H3BPC8 53 aa10.58□□□□□ -0.72
SNUPN-201ENST00000308588 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
SNUPN-201ENST00000308588 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
SNUPN-201ENST00000308588 MT1FP04733 61 aa10.53□□□□□ -0.72
SNUPN-201ENST00000308588 S4R3F8 94 aa10.53□□□□□ -0.72
SNUPN-201ENST00000308588 LCA10Q71F78 164 aa10.5□□□□□ -0.73
SNUPN-201ENST00000308588 KRTAP10-10P60014 251 aa10.47□□□□□ -0.73
SNUPN-201ENST00000308588 A8MUN3 132 aa10.42□□□□□ -0.74
SNUPN-201ENST00000308588 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
SNUPN-201ENST00000308588 CSAG1Q6PB30 78 aa10.41□□□□□ -0.74
SNUPN-201ENST00000308588 KRTAP9-3Q9BYQ3 159 aa10.38□□□□□ -0.75
SNUPN-201ENST00000308588 PCP4P48539 62 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms