RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 KRTAP1-4P0C5Y4 121 aa11.75□□□□□ -0.53
SSH3-202ENST00000308298 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
SSH3-202ENST00000308298 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
SSH3-202ENST00000308298 H3BPC8 53 aa11.72□□□□□ -0.53
SSH3-202ENST00000308298 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
SSH3-202ENST00000308298 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
SSH3-202ENST00000308298 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
SSH3-202ENST00000308298 TRAV22A0A0B4J277 110 aa11.69□□□□□ -0.54
SSH3-202ENST00000308298 A0A1B0GVY2 172 aa11.69□□□□□ -0.54
SSH3-202ENST00000308298 MRPL34Q9BQ48 92 aaKnown RBP11.68□□□□□ -0.54
SSH3-202ENST00000308298 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
SSH3-202ENST00000308298 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
SSH3-202ENST00000308298 CYP4F30PQ9H0H9 118 aa11.64□□□□□ -0.55
SSH3-202ENST00000308298 NDUFS5O43920 106 aa11.64□□□□□ -0.55
SSH3-202ENST00000308298 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
SSH3-202ENST00000308298 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
SSH3-202ENST00000308298 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
SSH3-202ENST00000308298 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
SSH3-202ENST00000308298 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
SSH3-202ENST00000308298 RYR2Q92736 4967 aa11.59□□□□□ -0.55
SSH3-202ENST00000308298 TYMSOSQ8TAI1 123 aa11.59□□□□□ -0.55
SSH3-202ENST00000308298 PRO0628Q9UI54 55 aa11.58□□□□□ -0.56
SSH3-202ENST00000308298 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
SSH3-202ENST00000308298 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
SSH3-202ENST00000308298 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
SSH3-202ENST00000308298 SPANXA2-OT1Q8N9U9 137 aa11.55□□□□□ -0.56
SSH3-202ENST00000308298 PRR4Q16378 134 aa11.52□□□□□ -0.56
SSH3-202ENST00000308298 SPINK1P00995 79 aa11.51□□□□□ -0.57
SSH3-202ENST00000308298 LINC00313P59037 77 aa11.51□□□□□ -0.57
SSH3-202ENST00000308298 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
SSH3-202ENST00000308298 Q1T7F1 81 aa11.48□□□□□ -0.57
SSH3-202ENST00000308298 PRR26Q8N8Z3 221 aa11.48□□□□□ -0.57
SSH3-202ENST00000308298 KRTAP10-4P60372 401 aaPredicted RBP11.46□□□□□ -0.57
SSH3-202ENST00000308298 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
SSH3-202ENST00000308298 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
SSH3-202ENST00000308298 PCOTHQ58A44 107 aa11.43□□□□□ -0.58
SSH3-202ENST00000308298 KRTAP13-3Q3SY46 172 aa11.42□□□□□ -0.58
SSH3-202ENST00000308298 Q5W150 140 aa11.42□□□□□ -0.58
SSH3-202ENST00000308298 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
SSH3-202ENST00000308298 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
SSH3-202ENST00000308298 Q8N9P0 234 aaPredicted RBP11.41□□□□□ -0.58
SSH3-202ENST00000308298 V9GYY9 64 aa11.4□□□□□ -0.58
SSH3-202ENST00000308298 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
SSH3-202ENST00000308298 LOC101927531A0A1B0GV80 90 aa11.39□□□□□ -0.59
SSH3-202ENST00000308298 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
SSH3-202ENST00000308298 KRTAP16-1A8MUX0 517 aa11.38□□□□□ -0.59
SSH3-202ENST00000308298 FAT1Q14517 4588 aa11.38□□□□□ -0.59
SSH3-202ENST00000308298 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
SSH3-202ENST00000308298 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.6
SSH3-202ENST00000308298 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
SSH3-202ENST00000308298 PSPHP1O15172 72 aa11.25□□□□□ -0.61
SSH3-202ENST00000308298 COA5Q86WW8 74 aa11.23□□□□□ -0.61
SSH3-202ENST00000308298 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
SSH3-202ENST00000308298 RYR3Q15413 4870 aa11.18□□□□□ -0.62
SSH3-202ENST00000308298 A8MUN3 132 aa11.18□□□□□ -0.62
SSH3-202ENST00000308298 HRES1P13985 223 aa11.13□□□□□ -0.63
SSH3-202ENST00000308298 Q5VSD8 79 aa11.13□□□□□ -0.63
SSH3-202ENST00000308298 Q5VV11 94 aa11.13□□□□□ -0.63
SSH3-202ENST00000308298 HSPG2P98160 4391 aa11.09□□□□□ -0.63
SSH3-202ENST00000308298 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
SSH3-202ENST00000308298 IGKV2D-30A0A075B6S6 120 aa11.08□□□□□ -0.64
SSH3-202ENST00000308298 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
SSH3-202ENST00000308298 CHKB-CPT1BH3BT56 60 aa11.04□□□□□ -0.64
SSH3-202ENST00000308298 DMAC1Q96GE9 116 aa11.04□□□□□ -0.64
SSH3-202ENST00000308298 ACYP2P14621 99 aa11.04□□□□□ -0.64
SSH3-202ENST00000308298 Q75L30 129 aa11.03□□□□□ -0.64
SSH3-202ENST00000308298 RYR1P21817 5038 aa11.03□□□□□ -0.64
SSH3-202ENST00000308298 Q8N1X5 172 aa11.02□□□□□ -0.64
SSH3-202ENST00000308298 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
SSH3-202ENST00000308298 KRTAP10-8P60410 259 aa11.02□□□□□ -0.65
SSH3-202ENST00000308298 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.65
SSH3-202ENST00000308298 A8MUU9 505 aa11.01□□□□□ -0.65
SSH3-202ENST00000308298 LINC01558Q9Y6Z2 57 aa11.01□□□□□ -0.65
SSH3-202ENST00000308298 TNXBP22105 4242 aa10.98□□□□□ -0.65
SSH3-202ENST00000308298 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
SSH3-202ENST00000308298 LRP1Q07954 4544 aaKnown RBP10.96□□□□□ -0.66
SSH3-202ENST00000308298 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
SSH3-202ENST00000308298 A6NED7 52 aa10.91□□□□□ -0.66
SSH3-202ENST00000308298 FAT3Q8TDW7 4589 aa10.9□□□□□ -0.66
SSH3-202ENST00000308298 PMAIP1Q13794 54 aa10.86□□□□□ -0.67
SSH3-202ENST00000308298 KIAA1109Q2LD37 5005 aa10.85□□□□□ -0.67
SSH3-202ENST00000308298 A8MU10 97 aa10.84□□□□□ -0.67
SSH3-202ENST00000308298 CDC42SE1Q9NRR8 79 aa10.82□□□□□ -0.68
SSH3-202ENST00000308298 ATP11AUNQ6ZP68 121 aa10.8□□□□□ -0.68
SSH3-202ENST00000308298 LCA10Q71F78 164 aa10.8□□□□□ -0.68
SSH3-202ENST00000308298 EPPK1P58107 5090 aaKnown RBP10.78□□□□□ -0.68
SSH3-202ENST00000308298 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
SSH3-202ENST00000308298 SPINK7P58062 85 aa10.74□□□□□ -0.69
SSH3-202ENST00000308298 SPTSSBQ8NFR3 76 aa10.74□□□□□ -0.69
SSH3-202ENST00000308298 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
SSH3-202ENST00000308298 SEC61GP60059 68 aa10.72□□□□□ -0.69
SSH3-202ENST00000308298 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
SSH3-202ENST00000308298 RPL37P61927 97 aaKnown RBP10.65□□□□□ -0.7
SSH3-202ENST00000308298 A0A1B0GU69 56 aa10.63□□□□□ -0.71
SSH3-202ENST00000308298 XP32Q5T750 250 aa10.63□□□□□ -0.71
SSH3-202ENST00000308298 KRTAP3-1Q9BYR8 98 aa10.6□□□□□ -0.71
SSH3-202ENST00000308298 KTN1-AS1Q86SY8 53 aa10.58□□□□□ -0.72
SSH3-202ENST00000308298 A6NN06 94 aa10.58□□□□□ -0.72
SSH3-202ENST00000308298 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
SSH3-202ENST00000308298 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms