RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 A0A087X002 238 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 NDUFS5O43920 106 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 Q5VV11 94 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
CSDC2-201ENST00000306149 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
CSDC2-201ENST00000306149 DNHD1Q96M86 4753 aa9□□□□□ -0.97
CSDC2-201ENST00000306149 COA5Q86WW8 74 aa8.99□□□□□ -0.97
CSDC2-201ENST00000306149 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
CSDC2-201ENST00000306149 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
CSDC2-201ENST00000306149 C1orf134Q5TEV5 83 aa8.96□□□□□ -0.97
CSDC2-201ENST00000306149 LY6G6CO95867 125 aa8.95□□□□□ -0.98
CSDC2-201ENST00000306149 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CSDC2-201ENST00000306149 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
CSDC2-201ENST00000306149 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
CSDC2-201ENST00000306149 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
CSDC2-201ENST00000306149 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
CSDC2-201ENST00000306149 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
CSDC2-201ENST00000306149 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
CSDC2-201ENST00000306149 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
CSDC2-201ENST00000306149 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
CSDC2-201ENST00000306149 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
CSDC2-201ENST00000306149 Q75L30 129 aa8.9□□□□□ -0.98
CSDC2-201ENST00000306149 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.99
CSDC2-201ENST00000306149 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
CSDC2-201ENST00000306149 H3BS24 57 aa8.87□□□□□ -0.99
CSDC2-201ENST00000306149 KTN1-AS1Q86SY8 53 aa8.87□□□□□ -0.99
CSDC2-201ENST00000306149 Q5W150 140 aa8.84□□□□□ -0.99
CSDC2-201ENST00000306149 LRP1BQ9NZR2 4599 aa8.84□□□□□ -0.99
CSDC2-201ENST00000306149 LINC01558Q9Y6Z2 57 aa8.84□□□□□ -1
CSDC2-201ENST00000306149 HRES1P13985 223 aa8.83□□□□□ -1
CSDC2-201ENST00000306149 KRTAP13-3Q3SY46 172 aa8.82□□□□□ -1
CSDC2-201ENST00000306149 HYDINQ4G0P3 5121 aa8.8□□□□□ -1
CSDC2-201ENST00000306149 LCA10Q71F78 164 aa8.8□□□□□ -1
CSDC2-201ENST00000306149 A6NED7 52 aa8.79□□□□□ -1
CSDC2-201ENST00000306149 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
CSDC2-201ENST00000306149 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
CSDC2-201ENST00000306149 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
CSDC2-201ENST00000306149 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
CSDC2-201ENST00000306149 PKD1P98161 4303 aa8.76□□□□□ -1.01
CSDC2-201ENST00000306149 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
CSDC2-201ENST00000306149 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
CSDC2-201ENST00000306149 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
CSDC2-201ENST00000306149 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
CSDC2-201ENST00000306149 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
CSDC2-201ENST00000306149 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
CSDC2-201ENST00000306149 A6NN06 94 aa8.72□□□□□ -1.01
CSDC2-201ENST00000306149 LINC00313P59037 77 aa8.7□□□□□ -1.02
CSDC2-201ENST00000306149 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
CSDC2-201ENST00000306149 ACYP2P14621 99 aa8.67□□□□□ -1.02
CSDC2-201ENST00000306149 Q6ZSA8 131 aa8.66□□□□□ -1.02
CSDC2-201ENST00000306149 FAM229AH3BQW9 127 aa8.65□□□□□ -1.03
CSDC2-201ENST00000306149 SPINK7P58062 85 aa8.65□□□□□ -1.03
CSDC2-201ENST00000306149 DMAC1Q96GE9 116 aa8.65□□□□□ -1.03
CSDC2-201ENST00000306149 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
CSDC2-201ENST00000306149 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
CSDC2-201ENST00000306149 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
CSDC2-201ENST00000306149 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
CSDC2-201ENST00000306149 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
CSDC2-201ENST00000306149 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
CSDC2-201ENST00000306149 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
CSDC2-201ENST00000306149 IGKV2D-30A0A075B6S6 120 aa8.54□□□□□ -1.04
CSDC2-201ENST00000306149 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
CSDC2-201ENST00000306149 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
CSDC2-201ENST00000306149 A0A1B0GU69 56 aa8.46□□□□□ -1.05
CSDC2-201ENST00000306149 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.06
CSDC2-201ENST00000306149 SACSQ9NZJ4 4579 aa8.45□□□□□ -1.06
CSDC2-201ENST00000306149 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
CSDC2-201ENST00000306149 FAT1Q14517 4588 aa8.44□□□□□ -1.06
CSDC2-201ENST00000306149 SPINK1P00995 79 aa8.43□□□□□ -1.06
CSDC2-201ENST00000306149 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
CSDC2-201ENST00000306149 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
CSDC2-201ENST00000306149 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
CSDC2-201ENST00000306149 Q8N1X5 172 aa8.35□□□□□ -1.07
CSDC2-201ENST00000306149 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
CSDC2-201ENST00000306149 UQCR11O14957 56 aa8.33□□□□□ -1.08
CSDC2-201ENST00000306149 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
CSDC2-201ENST00000306149 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
CSDC2-201ENST00000306149 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
CSDC2-201ENST00000306149 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
CSDC2-201ENST00000306149 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
CSDC2-201ENST00000306149 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
CSDC2-201ENST00000306149 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
CSDC2-201ENST00000306149 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
CSDC2-201ENST00000306149 A8MUU9 505 aa8.16□□□□□ -1.1
CSDC2-201ENST00000306149 KMT2CQ8NEZ4 4911 aaKnown RBP8.15□□□□□ -1.1
CSDC2-201ENST00000306149 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
CSDC2-201ENST00000306149 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
CSDC2-201ENST00000306149 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
CSDC2-201ENST00000306149 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
CSDC2-201ENST00000306149 RYR2Q92736 4967 aa8.12□□□□□ -1.11
CSDC2-201ENST00000306149 DMBT1Q9UGM3 2413 aaPredicted RBP8.06□□□□□ -1.12
CSDC2-201ENST00000306149 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
CSDC2-201ENST00000306149 H0YAA0 97 aa8.04□□□□□ -1.12
CSDC2-201ENST00000306149 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
CSDC2-201ENST00000306149 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
CSDC2-201ENST00000306149 HSPG2P98160 4391 aa8□□□□□ -1.13
CSDC2-201ENST00000306149 TNXBP22105 4242 aa7.99□□□□□ -1.13
CSDC2-201ENST00000306149 A0A1B0GU33 70 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms