RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NOTCH2NLQ7Z3S9 236 aa13.61□□□□□ -0.23
CDKN2A-201ENST00000304494 LYRM7Q5U5X0 104 aa13.6□□□□□ -0.23
CDKN2A-201ENST00000304494 J3KT08 172 aa13.59□□□□□ -0.23
CDKN2A-201ENST00000304494 A0A1B0GVX0 72 aa13.58□□□□□ -0.24
CDKN2A-201ENST00000304494 C8orf87E5RJ46 101 aa13.58□□□□□ -0.24
CDKN2A-201ENST00000304494 Q6ZQT0 140 aa13.57□□□□□ -0.24
CDKN2A-201ENST00000304494 LOC110117498A0A087WWA1 95 aa13.54□□□□□ -0.24
CDKN2A-201ENST00000304494 A0A1B0GW54 56 aa13.53□□□□□ -0.24
CDKN2A-201ENST00000304494 PDE6GP18545 87 aa13.53□□□□□ -0.24
CDKN2A-201ENST00000304494 BATFQ16520 125 aa13.51□□□□□ -0.25
CDKN2A-201ENST00000304494 FSIP2Q5CZC0 6907 aa13.49□□□□□ -0.25
CDKN2A-201ENST00000304494 NDUFB1O75438 58 aa13.47□□□□□ -0.25
CDKN2A-201ENST00000304494 C14orf132Q9NPU4 83 aa13.44□□□□□ -0.26
CDKN2A-201ENST00000304494 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
CDKN2A-201ENST00000304494 C9orf118A6NHY6 69 aa13.38□□□□□ -0.27
CDKN2A-201ENST00000304494 A8MWP4 228 aa13.38□□□□□ -0.27
CDKN2A-201ENST00000304494 RBM12B-AS1Q9P1G2 102 aa13.37□□□□□ -0.27
CDKN2A-201ENST00000304494 FAM236DA0A1B0GTK5 79 aa13.36□□□□□ -0.27
CDKN2A-201ENST00000304494 FAM236CP0DP71 79 aa13.36□□□□□ -0.27
CDKN2A-201ENST00000304494 ZCCHC13Q8WW36 166 aaKnown RBP13.34□□□□□ -0.27
CDKN2A-201ENST00000304494 CRCT1Q9UGL9 99 aa13.34□□□□□ -0.27
CDKN2A-201ENST00000304494 H3BT86 120 aa13.33□□□□□ -0.28
CDKN2A-201ENST00000304494 HRES1P13985 223 aa13.33□□□□□ -0.28
CDKN2A-201ENST00000304494 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
CDKN2A-201ENST00000304494 TAX1BP3O14907 124 aa13.32□□□□□ -0.28
CDKN2A-201ENST00000304494 NREPQ16612 68 aa13.32□□□□□ -0.28
CDKN2A-201ENST00000304494 Q8N9P0 234 aaPredicted RBP13.32□□□□□ -0.28
CDKN2A-201ENST00000304494 C8orf17Q9NRJ1 99 aa13.32□□□□□ -0.28
CDKN2A-201ENST00000304494 MPLKIPQ8TAP9 179 aa13.31□□□□□ -0.28
CDKN2A-201ENST00000304494 IGKV3D-7A0A0C4DH55 119 aa13.3□□□□□ -0.28
CDKN2A-201ENST00000304494 PRR15Q8IV56 129 aa13.24□□□□□ -0.29
CDKN2A-201ENST00000304494 MTURNQ8N3F0 131 aa13.23□□□□□ -0.29
CDKN2A-201ENST00000304494 Q6ZVQ6 151 aa13.22□□□□□ -0.29
CDKN2A-201ENST00000304494 SPINK7P58062 85 aa13.21□□□□□ -0.29
CDKN2A-201ENST00000304494 KRTAP9-8Q9BYQ0 159 aa13.16□□□□□ -0.3
CDKN2A-201ENST00000304494 SPCS1Q9Y6A9 102 aa13.14□□□□□ -0.31
CDKN2A-201ENST00000304494 MMP24-AS1A0A0U1RRL7 71 aa13.13□□□□□ -0.31
CDKN2A-201ENST00000304494 TMEM254Q8TBM7 123 aa13.13□□□□□ -0.31
CDKN2A-201ENST00000304494 MRPL34Q9BQ48 92 aaKnown RBP13.11□□□□□ -0.31
CDKN2A-201ENST00000304494 K7EQZ3 153 aa13.09□□□□□ -0.31
CDKN2A-201ENST00000304494 BPY2O14599 106 aa13.08□□□□□ -0.32
CDKN2A-201ENST00000304494 hDV103S1A0JD37 113 aa13.07□□□□□ -0.32
CDKN2A-201ENST00000304494 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
CDKN2A-201ENST00000304494 WFDC13Q8IUB5 93 aa13.02□□□□□ -0.33
CDKN2A-201ENST00000304494 NDUFS5O43920 106 aa13.01□□□□□ -0.33
CDKN2A-201ENST00000304494 SMCPP49901 116 aaPredicted RBP12.99□□□□□ -0.33
CDKN2A-201ENST00000304494 MT2AP02795 61 aa12.98□□□□□ -0.33
CDKN2A-201ENST00000304494 K7EP34 96 aa12.92□□□□□ -0.34
CDKN2A-201ENST00000304494 PRO0461Q9UI25 63 aa12.91□□□□□ -0.34
CDKN2A-201ENST00000304494 Q8N9L7 120 aa12.89□□□□□ -0.35
CDKN2A-201ENST00000304494 MT1FP04733 61 aa12.88□□□□□ -0.35
CDKN2A-201ENST00000304494 CASC2Q6XLA1 102 aa12.88□□□□□ -0.35
CDKN2A-201ENST00000304494 UBL5Q9BZL1 73 aa12.87□□□□□ -0.35
CDKN2A-201ENST00000304494 LCE2BO14633 110 aa12.86□□□□□ -0.35
CDKN2A-201ENST00000304494 KRTAP10-10P60014 251 aa12.86□□□□□ -0.35
CDKN2A-201ENST00000304494 USH2AO75445 5202 aa12.85□□□□□ -0.35
CDKN2A-201ENST00000304494 LINC00846Q9NV44 126 aa12.84□□□□□ -0.35
CDKN2A-201ENST00000304494 HCG22E2RYF7 251 aa12.8□□□□□ -0.36
CDKN2A-201ENST00000304494 Q5W150 140 aa12.8□□□□□ -0.36
CDKN2A-201ENST00000304494 C7orf65Q6ZTY9 151 aa12.8□□□□□ -0.36
CDKN2A-201ENST00000304494 IGKV2D-30A0A075B6S6 120 aa12.79□□□□□ -0.36
CDKN2A-201ENST00000304494 IGKV2-30P06310 120 aa12.79□□□□□ -0.36
CDKN2A-201ENST00000304494 GTF2H5Q6ZYL4 71 aa12.79□□□□□ -0.36
CDKN2A-201ENST00000304494 CXCL6P80162 114 aa12.75□□□□□ -0.37
CDKN2A-201ENST00000304494 H1FX-AS1Q4G0G2 97 aa12.75□□□□□ -0.37
CDKN2A-201ENST00000304494 KRTAP9-3Q9BYQ3 159 aa12.74□□□□□ -0.37
CDKN2A-201ENST00000304494 SSPOA2VEC9 5147 aa12.72□□□□□ -0.37
CDKN2A-201ENST00000304494 F8W1H4 67 aa12.71□□□□□ -0.37
CDKN2A-201ENST00000304494 PCP4L1A6NKN8 68 aa12.68□□□□□ -0.38
CDKN2A-201ENST00000304494 ETDBQ3ZM63 59 aa12.61□□□□□ -0.39
CDKN2A-201ENST00000304494 C4orf26Q17RF5 130 aa12.56□□□□□ -0.4
CDKN2A-201ENST00000304494 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.41
CDKN2A-201ENST00000304494 KRTAP19-1Q8IUB9 90 aa12.46□□□□□ -0.41
CDKN2A-201ENST00000304494 FCGBPQ9Y6R7 5405 aaPredicted RBP12.44□□□□□ -0.42
CDKN2A-201ENST00000304494 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.41□□□□□ -0.42
CDKN2A-201ENST00000304494 ACYP1P07311 99 aa12.4□□□□□ -0.42
CDKN2A-201ENST00000304494 C1orf64Q8NEQ6 169 aa12.36□□□□□ -0.43
CDKN2A-201ENST00000304494 KRTAP3-1Q9BYR8 98 aa12.34□□□□□ -0.43
CDKN2A-201ENST00000304494 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
CDKN2A-201ENST00000304494 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
CDKN2A-201ENST00000304494 S4R3F8 94 aa12.31□□□□□ -0.44
CDKN2A-201ENST00000304494 ATP5EP2Q5VTU8 51 aa12.29□□□□□ -0.44
CDKN2A-201ENST00000304494 KRTAP9-7A8MTY7 169 aa12.25□□□□□ -0.45
CDKN2A-201ENST00000304494 KRTAP19-6Q3LI70 58 aa12.25□□□□□ -0.45
CDKN2A-201ENST00000304494 TRAV22A0A0B4J277 110 aa12.23□□□□□ -0.45
CDKN2A-201ENST00000304494 CSAG1Q6PB30 78 aa12.23□□□□□ -0.45
CDKN2A-201ENST00000304494 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
CDKN2A-201ENST00000304494 LCA10Q71F78 164 aa12.21□□□□□ -0.45
CDKN2A-201ENST00000304494 HIST1H4AP62805 103 aaKnown RBP12.2□□□□□ -0.46
CDKN2A-201ENST00000304494 LOC101927531A0A1B0GV80 90 aa12.19□□□□□ -0.46
CDKN2A-201ENST00000304494 MACF1Q9UPN3 7388 aaKnown RBP12.18□□□□□ -0.46
CDKN2A-201ENST00000304494 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
CDKN2A-201ENST00000304494 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
CDKN2A-201ENST00000304494 UQCRQO14949 82 aa12.11□□□□□ -0.47
CDKN2A-201ENST00000304494 LINC00643Q86TS7 51 aa12.08□□□□□ -0.48
CDKN2A-201ENST00000304494 ATOX1O00244 68 aa12.07□□□□□ -0.48
CDKN2A-201ENST00000304494 H0Y9P7 68 aa12.04□□□□□ -0.48
CDKN2A-201ENST00000304494 SYNE2Q8WXH0 6885 aaKnown RBP12.04□□□□□ -0.48
CDKN2A-201ENST00000304494 A0A087WVE0 104 aa12□□□□□ -0.49
CDKN2A-201ENST00000304494 A0A1B0GV90 55 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms