RNA–Protein interactions for RNA: ENST00000304195.7

FRMD3-201, Transcript of FERM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRMD3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-201ENST00000304195 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
FRMD3-201ENST00000304195 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
FRMD3-201ENST00000304195 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
FRMD3-201ENST00000304195 S4R3F8 94 aa8.58□□□□□ -1.04
FRMD3-201ENST00000304195 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
FRMD3-201ENST00000304195 LCE6AA0A183 80 aa8.57□□□□□ -1.04
FRMD3-201ENST00000304195 Q5VSD8 79 aa8.56□□□□□ -1.04
FRMD3-201ENST00000304195 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
FRMD3-201ENST00000304195 MXRA5Q9NR99 2828 aa8.53□□□□□ -1.04
FRMD3-201ENST00000304195 WDFY3Q8IZQ1 3526 aa8.52□□□□□ -1.05
FRMD3-201ENST00000304195 RELNP78509 3460 aa8.5□□□□□ -1.05
FRMD3-201ENST00000304195 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
FRMD3-201ENST00000304195 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
FRMD3-201ENST00000304195 TENM3Q9P273 2699 aa8.45□□□□□ -1.06
FRMD3-201ENST00000304195 M0R2T5 61 aa8.44□□□□□ -1.06
FRMD3-201ENST00000304195 R4GN34 69 aa8.44□□□□□ -1.06
FRMD3-201ENST00000304195 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
FRMD3-201ENST00000304195 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
FRMD3-201ENST00000304195 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
FRMD3-201ENST00000304195 H1FX-AS1Q4G0G2 97 aa8.41□□□□□ -1.06
FRMD3-201ENST00000304195 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
FRMD3-201ENST00000304195 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
FRMD3-201ENST00000304195 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
FRMD3-201ENST00000304195 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
FRMD3-201ENST00000304195 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
FRMD3-201ENST00000304195 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
FRMD3-201ENST00000304195 LAMA5O15230 3695 aa8.32□□□□□ -1.08
FRMD3-201ENST00000304195 ROMO1P60602 79 aa8.31□□□□□ -1.08
FRMD3-201ENST00000304195 M0QZ58 72 aa8.3□□□□□ -1.08
FRMD3-201ENST00000304195 ZFHX4Q86UP3 3567 aa8.29□□□□□ -1.08
FRMD3-201ENST00000304195 A8MU10 97 aa8.27□□□□□ -1.09
FRMD3-201ENST00000304195 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
FRMD3-201ENST00000304195 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
FRMD3-201ENST00000304195 PKD1L1Q8TDX9 2849 aa8.25□□□□□ -1.09
FRMD3-201ENST00000304195 MUC3AQ02505 3323 aa8.21□□□□□ -1.1
FRMD3-201ENST00000304195 A6NN06 94 aa8.2□□□□□ -1.1
FRMD3-201ENST00000304195 H3BS24 57 aa8.18□□□□□ -1.1
FRMD3-201ENST00000304195 PDZD2O15018 2839 aa8.17□□□□□ -1.1
FRMD3-201ENST00000304195 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
FRMD3-201ENST00000304195 TENM2Q9NT68 2774 aa8.12□□□□□ -1.11
FRMD3-201ENST00000304195 VWFP04275 2813 aa8.11□□□□□ -1.11
FRMD3-201ENST00000304195 DMDP11532 3685 aa8.1□□□□□ -1.11
FRMD3-201ENST00000304195 CSMD1Q96PZ7 3565 aa8.08□□□□□ -1.12
FRMD3-201ENST00000304195 TGP01266 2768 aa8.08□□□□□ -1.12
FRMD3-201ENST00000304195 A8MUU9 505 aa8.03□□□□□ -1.12
FRMD3-201ENST00000304195 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
FRMD3-201ENST00000304195 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
FRMD3-201ENST00000304195 SMG1Q96Q15 3661 aaKnown RBP8.01□□□□□ -1.13
FRMD3-201ENST00000304195 C20orf166-AS1Q96NR2 134 aa8.01□□□□□ -1.13
FRMD3-201ENST00000304195 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
FRMD3-201ENST00000304195 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
FRMD3-201ENST00000304195 CUBNO60494 3623 aa7.93□□□□□ -1.14
FRMD3-201ENST00000304195 OTOGQ6ZRI0 2925 aa7.92□□□□□ -1.14
FRMD3-201ENST00000304195 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
FRMD3-201ENST00000304195 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.15
FRMD3-201ENST00000304195 SRRM2Q9UQ35 2752 aaKnown RBP7.87□□□□□ -1.15
FRMD3-201ENST00000304195 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
FRMD3-201ENST00000304195 ZFHX3Q15911 3703 aa7.85□□□□□ -1.15
FRMD3-201ENST00000304195 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
FRMD3-201ENST00000304195 XP32Q5T750 250 aa7.82□□□□□ -1.16
FRMD3-201ENST00000304195 H0YAA0 97 aa7.74□□□□□ -1.17
FRMD3-201ENST00000304195 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
FRMD3-201ENST00000304195 NDUFAF8A1L188 74 aa7.72□□□□□ -1.17
FRMD3-201ENST00000304195 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
FRMD3-201ENST00000304195 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
FRMD3-201ENST00000304195 TNP1P09430 55 aa7.64□□□□□ -1.19
FRMD3-201ENST00000304195 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
FRMD3-201ENST00000304195 SPENQ96T58 3664 aaKnown RBP7.62□□□□□ -1.19
FRMD3-201ENST00000304195 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
FRMD3-201ENST00000304195 P0C880 135 aa7.58□□□□□ -1.2
FRMD3-201ENST00000304195 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
FRMD3-201ENST00000304195 COL7A1Q02388 2944 aa7.53□□□□□ -1.2
FRMD3-201ENST00000304195 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
FRMD3-201ENST00000304195 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
FRMD3-201ENST00000304195 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
FRMD3-201ENST00000304195 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
FRMD3-201ENST00000304195 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
FRMD3-201ENST00000304195 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
FRMD3-201ENST00000304195 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
FRMD3-201ENST00000304195 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
FRMD3-201ENST00000304195 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
FRMD3-201ENST00000304195 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
FRMD3-201ENST00000304195 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
FRMD3-201ENST00000304195 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
FRMD3-201ENST00000304195 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
FRMD3-201ENST00000304195 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
FRMD3-201ENST00000304195 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.29
FRMD3-201ENST00000304195 HUWE1Q7Z6Z7 4374 aaKnown RBP6.93□□□□□ -1.3
FRMD3-201ENST00000304195 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
FRMD3-201ENST00000304195 ZNF469Q96JG9 3925 aaPredicted RBP6.89□□□□□ -1.31
FRMD3-201ENST00000304195 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
FRMD3-201ENST00000304195 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
FRMD3-201ENST00000304195 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
FRMD3-201ENST00000304195 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.33
FRMD3-201ENST00000304195 AKAP9Q99996 3911 aa6.65□□□□□ -1.35
FRMD3-201ENST00000304195 DNAH9Q9NYC9 4486 aa6.62□□□□□ -1.35
FRMD3-201ENST00000304195 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
FRMD3-201ENST00000304195 DNAH5Q8TE73 4624 aa6.59□□□□□ -1.35
FRMD3-201ENST00000304195 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
FRMD3-201ENST00000304195 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms