RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 DNAH2Q9P225 4427 aa14.21□□□□□ -0.13
FOXA3-201ENST00000302177 NDUFS5O43920 106 aa14.21□□□□□ -0.13
FOXA3-201ENST00000302177 LIMD2Q9BT23 127 aa14.19□□□□□ -0.14
FOXA3-201ENST00000302177 HYDINQ4G0P3 5121 aa14.19□□□□□ -0.14
FOXA3-201ENST00000302177 PSPHP1O15172 72 aa14.18□□□□□ -0.14
FOXA3-201ENST00000302177 DNAH8Q96JB1 4490 aa14.17□□□□□ -0.14
FOXA3-201ENST00000302177 Q8N9P0 234 aaPredicted RBP14.16□□□□□ -0.14
FOXA3-201ENST00000302177 KMT2AQ03164 3969 aa14.16□□□□□ -0.14
FOXA3-201ENST00000302177 A0A087X002 238 aa14.15□□□□□ -0.14
FOXA3-201ENST00000302177 PCOTHQ58A44 107 aa14.15□□□□□ -0.14
FOXA3-201ENST00000302177 NOTCH2NLQ7Z3S9 236 aa14.15□□□□□ -0.14
FOXA3-201ENST00000302177 COA5Q86WW8 74 aa14.15□□□□□ -0.14
FOXA3-201ENST00000302177 RYR2Q92736 4967 aa14.14□□□□□ -0.15
FOXA3-201ENST00000302177 ALMS1Q8TCU4 4167 aa14.13□□□□□ -0.15
FOXA3-201ENST00000302177 CIRBP-AS1Q8TBR5 109 aa14.12□□□□□ -0.15
FOXA3-201ENST00000302177 A8MUN3 132 aa14.11□□□□□ -0.15
FOXA3-201ENST00000302177 C8orf87E5RJ46 101 aa14.1□□□□□ -0.15
FOXA3-201ENST00000302177 LOC101927531A0A1B0GV80 90 aa14.09□□□□□ -0.15
FOXA3-201ENST00000302177 SPINK6Q6UWN8 80 aa14.07□□□□□ -0.16
FOXA3-201ENST00000302177 Q5VV11 94 aa14.07□□□□□ -0.16
FOXA3-201ENST00000302177 DNAH6Q9C0G6 4158 aa14.06□□□□□ -0.16
FOXA3-201ENST00000302177 KRTAP13-3Q3SY46 172 aa14.03□□□□□ -0.16
FOXA3-201ENST00000302177 KRTAP10-2P60368 255 aa14.02□□□□□ -0.17
FOXA3-201ENST00000302177 FRAS1Q86XX4 4008 aa14.01□□□□□ -0.17
FOXA3-201ENST00000302177 Q6ZSA8 131 aa14□□□□□ -0.17
FOXA3-201ENST00000302177 Q5W150 140 aa13.98□□□□□ -0.17
FOXA3-201ENST00000302177 PRR15LQ9BU68 103 aa13.96□□□□□ -0.18
FOXA3-201ENST00000302177 HRES1P13985 223 aa13.93□□□□□ -0.18
FOXA3-201ENST00000302177 Q75L30 129 aa13.93□□□□□ -0.18
FOXA3-201ENST00000302177 CHKB-CPT1BH3BT56 60 aa13.92□□□□□ -0.18
FOXA3-201ENST00000302177 LINC00313P59037 77 aa13.92□□□□□ -0.18
FOXA3-201ENST00000302177 LINC01558Q9Y6Z2 57 aa13.92□□□□□ -0.18
FOXA3-201ENST00000302177 KRTAP13-2Q52LG2 175 aa13.91□□□□□ -0.18
FOXA3-201ENST00000302177 KRTAP10-1P60331 282 aa13.87□□□□□ -0.19
FOXA3-201ENST00000302177 DNAH5Q8TE73 4624 aa13.87□□□□□ -0.19
FOXA3-201ENST00000302177 FAM229AH3BQW9 127 aa13.86□□□□□ -0.19
FOXA3-201ENST00000302177 DNAH11Q96DT5 4516 aa13.85□□□□□ -0.19
FOXA3-201ENST00000302177 SPAG11AQ6PDA7 123 aa13.81□□□□□ -0.2
FOXA3-201ENST00000302177 ACYP2P14621 99 aa13.8□□□□□ -0.2
FOXA3-201ENST00000302177 KRTAP1-4P0C5Y4 121 aa13.79□□□□□ -0.2
FOXA3-201ENST00000302177 EPPK1P58107 5090 aaKnown RBP13.75□□□□□ -0.21
FOXA3-201ENST00000302177 KRTAP16-1A8MUX0 517 aa13.74□□□□□ -0.21
FOXA3-201ENST00000302177 A6NED7 52 aa13.73□□□□□ -0.21
FOXA3-201ENST00000302177 DMAC1Q96GE9 116 aa13.72□□□□□ -0.21
FOXA3-201ENST00000302177 IGKV2-30P06310 120 aa13.72□□□□□ -0.21
FOXA3-201ENST00000302177 PKD1P98161 4303 aa13.71□□□□□ -0.21
FOXA3-201ENST00000302177 FAT2Q9NYQ8 4349 aa13.7□□□□□ -0.22
FOXA3-201ENST00000302177 LCA10Q71F78 164 aa13.69□□□□□ -0.22
FOXA3-201ENST00000302177 A8MU10 97 aa13.68□□□□□ -0.22
FOXA3-201ENST00000302177 ATP11AUNQ6ZP68 121 aa13.67□□□□□ -0.22
FOXA3-201ENST00000302177 CDC42SE1Q9NRR8 79 aa13.67□□□□□ -0.22
FOXA3-201ENST00000302177 C4orf48Q5BLP8 95 aa13.66□□□□□ -0.22
FOXA3-201ENST00000302177 PMAIP1Q13794 54 aa13.65□□□□□ -0.22
FOXA3-201ENST00000302177 PRR26Q8N8Z3 221 aa13.65□□□□□ -0.22
FOXA3-201ENST00000302177 SPINK1P00995 79 aa13.64□□□□□ -0.23
FOXA3-201ENST00000302177 PLA2G1BP04054 148 aaKnown RBP13.63□□□□□ -0.23
FOXA3-201ENST00000302177 LRP1BQ9NZR2 4599 aa13.62□□□□□ -0.23
FOXA3-201ENST00000302177 TYMSOSQ8TAI1 123 aa13.61□□□□□ -0.23
FOXA3-201ENST00000302177 RETNLBQ9BQ08 111 aa13.58□□□□□ -0.24
FOXA3-201ENST00000302177 A0A1B0GVY2 172 aa13.56□□□□□ -0.24
FOXA3-201ENST00000302177 RPS29P62273 56 aaKnown RBP13.54□□□□□ -0.24
FOXA3-201ENST00000302177 PKHD1P08F94 4074 aa13.53□□□□□ -0.24
FOXA3-201ENST00000302177 SPINK7P58062 85 aa13.51□□□□□ -0.25
FOXA3-201ENST00000302177 SPTSSBQ8NFR3 76 aa13.5□□□□□ -0.25
FOXA3-201ENST00000302177 VPS13BQ7Z7G8 4022 aa13.44□□□□□ -0.26
FOXA3-201ENST00000302177 BIRC6Q9NR09 4857 aa13.43□□□□□ -0.26
FOXA3-201ENST00000302177 IGKV2D-30A0A075B6S6 120 aa13.43□□□□□ -0.26
FOXA3-201ENST00000302177 LINC00304Q8N9R0 145 aa13.43□□□□□ -0.26
FOXA3-201ENST00000302177 A6NN06 94 aa13.4□□□□□ -0.27
FOXA3-201ENST00000302177 A0A1B0GU69 56 aa13.36□□□□□ -0.27
FOXA3-201ENST00000302177 KTN1-AS1Q86SY8 53 aa13.34□□□□□ -0.27
FOXA3-201ENST00000302177 DYNC1H1Q14204 4646 aaKnown RBP13.33□□□□□ -0.28
FOXA3-201ENST00000302177 C7orf65Q6ZTY9 151 aa13.33□□□□□ -0.28
FOXA3-201ENST00000302177 KIAA1109Q2LD37 5005 aa13.28□□□□□ -0.28
FOXA3-201ENST00000302177 SPATA8Q6RVD6 105 aa13.21□□□□□ -0.29
FOXA3-201ENST00000302177 SEC61GP60059 68 aa13.2□□□□□ -0.3
FOXA3-201ENST00000302177 A8MUU9 505 aa13.18□□□□□ -0.3
FOXA3-201ENST00000302177 C20orf166-AS1Q96NR2 134 aa13.18□□□□□ -0.3
FOXA3-201ENST00000302177 SMR3BP02814 79 aaPredicted RBP13.17□□□□□ -0.3
FOXA3-201ENST00000302177 UQCR11O14957 56 aa13.16□□□□□ -0.3
FOXA3-201ENST00000302177 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
FOXA3-201ENST00000302177 APOBP04114 4563 aaKnown RBP13.14□□□□□ -0.31
FOXA3-201ENST00000302177 RYR1P21817 5038 aa13.11□□□□□ -0.31
FOXA3-201ENST00000302177 HSPG2P98160 4391 aa13.1□□□□□ -0.31
FOXA3-201ENST00000302177 KRTAP17-1Q9BYP8 105 aa13.09□□□□□ -0.31
FOXA3-201ENST00000302177 MIR22HGQ0VDD5 57 aa13.08□□□□□ -0.32
FOXA3-201ENST00000302177 Q8N1X5 172 aa13.08□□□□□ -0.32
FOXA3-201ENST00000302177 HERC2O95714 4834 aa13.07□□□□□ -0.32
FOXA3-201ENST00000302177 C9orf92A6NGG3 77 aa13.03□□□□□ -0.32
FOXA3-201ENST00000302177 PKHD1L1Q86WI1 4243 aa13.01□□□□□ -0.33
FOXA3-201ENST00000302177 KRTAP4-5Q9BYR2 181 aa12.96□□□□□ -0.34
FOXA3-201ENST00000302177 FAT1Q14517 4588 aa12.95□□□□□ -0.34
FOXA3-201ENST00000302177 RBM12B-AS1Q9P1G2 102 aa12.94□□□□□ -0.34
FOXA3-201ENST00000302177 KRTAP3-1Q9BYR8 98 aa12.89□□□□□ -0.35
FOXA3-201ENST00000302177 Q5VSD8 79 aa12.83□□□□□ -0.36
FOXA3-201ENST00000302177 ABCA13Q86UQ4 5058 aa12.82□□□□□ -0.36
FOXA3-201ENST00000302177 PCLOQ9Y6V0 5065 aa12.78□□□□□ -0.36
FOXA3-201ENST00000302177 COX6B2Q6YFQ2 88 aa12.76□□□□□ -0.37
FOXA3-201ENST00000302177 KRTAP10-8P60410 259 aa12.7□□□□□ -0.38
FOXA3-201ENST00000302177 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms