RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
ABCA3-201ENST00000301732 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
ABCA3-201ENST00000301732 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
ABCA3-201ENST00000301732 A8MUU9 505 aa7.05□□□□□ -1.28
ABCA3-201ENST00000301732 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
ABCA3-201ENST00000301732 HIVEP1P15822 2718 aa7.03□□□□□ -1.28
ABCA3-201ENST00000301732 APCP25054 2843 aa7.01□□□□□ -1.29
ABCA3-201ENST00000301732 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
ABCA3-201ENST00000301732 EYSQ5T1H1 3165 aa7□□□□□ -1.29
ABCA3-201ENST00000301732 IGSF10Q6WRI0 2623 aa6.99□□□□□ -1.29
ABCA3-201ENST00000301732 ITPR1Q14643 2758 aa6.99□□□□□ -1.29
ABCA3-201ENST00000301732 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
ABCA3-201ENST00000301732 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
ABCA3-201ENST00000301732 UTP20O75691 2785 aaKnown RBP6.97□□□□□ -1.29
ABCA3-201ENST00000301732 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
ABCA3-201ENST00000301732 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
ABCA3-201ENST00000301732 ITPR2Q14571 2701 aa6.93□□□□□ -1.3
ABCA3-201ENST00000301732 ZZEF1O43149 2961 aa6.93□□□□□ -1.3
ABCA3-201ENST00000301732 CELSR2Q9HCU4 2923 aa6.92□□□□□ -1.3
ABCA3-201ENST00000301732 DCHS1Q96JQ0 3298 aa6.9□□□□□ -1.3
ABCA3-201ENST00000301732 LOC400499M0QZD8 3231 aa6.9□□□□□ -1.3
ABCA3-201ENST00000301732 A0A1B0GVY2 172 aa6.89□□□□□ -1.31
ABCA3-201ENST00000301732 LCE6AA0A183 80 aa6.89□□□□□ -1.31
ABCA3-201ENST00000301732 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
ABCA3-201ENST00000301732 DMXL1Q9Y485 3027 aa6.84□□□□□ -1.31
ABCA3-201ENST00000301732 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
ABCA3-201ENST00000301732 FLNCQ14315 2725 aa6.78□□□□□ -1.32
ABCA3-201ENST00000301732 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
ABCA3-201ENST00000301732 DCHS2Q6V1P9 2916 aa6.76□□□□□ -1.33
ABCA3-201ENST00000301732 TNP1P09430 55 aa6.76□□□□□ -1.33
ABCA3-201ENST00000301732 ZFHX4Q86UP3 3567 aa6.74□□□□□ -1.33
ABCA3-201ENST00000301732 Q6ZRN7 208 aaPredicted RBP6.73□□□□□ -1.33
ABCA3-201ENST00000301732 CSMD1Q96PZ7 3565 aa6.73□□□□□ -1.33
ABCA3-201ENST00000301732 TENM4Q6N022 2769 aa6.73□□□□□ -1.33
ABCA3-201ENST00000301732 H0YAA0 97 aa6.67□□□□□ -1.34
ABCA3-201ENST00000301732 LAMA5O15230 3695 aa6.66□□□□□ -1.34
ABCA3-201ENST00000301732 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.35
ABCA3-201ENST00000301732 CUBNO60494 3623 aa6.64□□□□□ -1.35
ABCA3-201ENST00000301732 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
ABCA3-201ENST00000301732 RELNP78509 3460 aa6.62□□□□□ -1.35
ABCA3-201ENST00000301732 ZANQ9Y493 2812 aa6.61□□□□□ -1.35
ABCA3-201ENST00000301732 NF1P21359 2839 aa6.61□□□□□ -1.35
ABCA3-201ENST00000301732 FBN2P35556 2912 aa6.59□□□□□ -1.35
ABCA3-201ENST00000301732 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
ABCA3-201ENST00000301732 TENM3Q9P273 2699 aa6.55□□□□□ -1.36
ABCA3-201ENST00000301732 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
ABCA3-201ENST00000301732 P0C880 135 aa6.53□□□□□ -1.36
ABCA3-201ENST00000301732 PKD1L1Q8TDX9 2849 aa6.51□□□□□ -1.37
ABCA3-201ENST00000301732 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
ABCA3-201ENST00000301732 XP32Q5T750 250 aa6.48□□□□□ -1.37
ABCA3-201ENST00000301732 VWFP04275 2813 aa6.45□□□□□ -1.38
ABCA3-201ENST00000301732 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
ABCA3-201ENST00000301732 SMG1Q96Q15 3661 aaKnown RBP6.43□□□□□ -1.38
ABCA3-201ENST00000301732 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
ABCA3-201ENST00000301732 TGP01266 2768 aa6.41□□□□□ -1.38
ABCA3-201ENST00000301732 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.38
ABCA3-201ENST00000301732 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
ABCA3-201ENST00000301732 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
ABCA3-201ENST00000301732 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
ABCA3-201ENST00000301732 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
ABCA3-201ENST00000301732 PDZD2O15018 2839 aa6.33□□□□□ -1.4
ABCA3-201ENST00000301732 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
ABCA3-201ENST00000301732 DMDP11532 3685 aa6.32□□□□□ -1.4
ABCA3-201ENST00000301732 HRNRQ86YZ3 2850 aaPredicted RBP6.29□□□□□ -1.4
ABCA3-201ENST00000301732 SPENQ96T58 3664 aaKnown RBP6.27□□□□□ -1.41
ABCA3-201ENST00000301732 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
ABCA3-201ENST00000301732 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
ABCA3-201ENST00000301732 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
ABCA3-201ENST00000301732 ZFHX3Q15911 3703 aa6.16□□□□□ -1.42
ABCA3-201ENST00000301732 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
ABCA3-201ENST00000301732 CSMD2Q7Z408 3487 aa6.1□□□□□ -1.43
ABCA3-201ENST00000301732 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
ABCA3-201ENST00000301732 FBN1P35555 2871 aaKnown RBP6.09□□□□□ -1.43
ABCA3-201ENST00000301732 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
ABCA3-201ENST00000301732 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
ABCA3-201ENST00000301732 MUC3AQ02505 3323 aa5.99□□□□□ -1.45
ABCA3-201ENST00000301732 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
ABCA3-201ENST00000301732 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
ABCA3-201ENST00000301732 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
ABCA3-201ENST00000301732 CSMD3Q7Z407 3707 aa5.91□□□□□ -1.46
ABCA3-201ENST00000301732 COL7A1Q02388 2944 aa5.9□□□□□ -1.46
ABCA3-201ENST00000301732 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
ABCA3-201ENST00000301732 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
ABCA3-201ENST00000301732 TRRAPQ9Y4A5 3859 aa5.77□□□□□ -1.49
ABCA3-201ENST00000301732 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
ABCA3-201ENST00000301732 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
ABCA3-201ENST00000301732 VPS13CQ709C8 3753 aa5.73□□□□□ -1.49
ABCA3-201ENST00000301732 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
ABCA3-201ENST00000301732 ANK3Q12955 4377 aaKnown RBP5.51□□□□□ -1.53
ABCA3-201ENST00000301732 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
ABCA3-201ENST00000301732 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
ABCA3-201ENST00000301732 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
ABCA3-201ENST00000301732 BSNQ9UPA5 3926 aa5.45□□□□□ -1.54
ABCA3-201ENST00000301732 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
ABCA3-201ENST00000301732 INE1O15225 51 aa5.43□□□□□ -1.54
ABCA3-201ENST00000301732 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
ABCA3-201ENST00000301732 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
ABCA3-201ENST00000301732 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
ABCA3-201ENST00000301732 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
ABCA3-201ENST00000301732 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms