RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 ALMS1Q8TCU4 4167 aa8.13□□□□□ -1.11
HTR3A-201ENST00000299961 PRR4Q16378 134 aa8.12□□□□□ -1.11
HTR3A-201ENST00000299961 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
HTR3A-201ENST00000299961 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
HTR3A-201ENST00000299961 MRPL34Q9BQ48 92 aaKnown RBP8.1□□□□□ -1.11
HTR3A-201ENST00000299961 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
HTR3A-201ENST00000299961 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
HTR3A-201ENST00000299961 NDUFS5O43920 106 aa8.08□□□□□ -1.12
HTR3A-201ENST00000299961 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
HTR3A-201ENST00000299961 PSPHP1O15172 72 aa8.07□□□□□ -1.12
HTR3A-201ENST00000299961 Q5VV11 94 aa8.06□□□□□ -1.12
HTR3A-201ENST00000299961 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
HTR3A-201ENST00000299961 A8MUN3 132 aa8.05□□□□□ -1.12
HTR3A-201ENST00000299961 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
HTR3A-201ENST00000299961 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
HTR3A-201ENST00000299961 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
HTR3A-201ENST00000299961 A0A087X002 238 aa8□□□□□ -1.13
HTR3A-201ENST00000299961 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
HTR3A-201ENST00000299961 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
HTR3A-201ENST00000299961 COA5Q86WW8 74 aa8□□□□□ -1.13
HTR3A-201ENST00000299961 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
HTR3A-201ENST00000299961 DNAH11Q96DT5 4516 aa7.98□□□□□ -1.13
HTR3A-201ENST00000299961 Q75L30 129 aa7.98□□□□□ -1.13
HTR3A-201ENST00000299961 PCOTHQ58A44 107 aa7.96□□□□□ -1.14
HTR3A-201ENST00000299961 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
HTR3A-201ENST00000299961 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
HTR3A-201ENST00000299961 LINC00313P59037 77 aa7.94□□□□□ -1.14
HTR3A-201ENST00000299961 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
HTR3A-201ENST00000299961 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
HTR3A-201ENST00000299961 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
HTR3A-201ENST00000299961 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
HTR3A-201ENST00000299961 PKD1P98161 4303 aa7.91□□□□□ -1.14
HTR3A-201ENST00000299961 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.15
HTR3A-201ENST00000299961 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.15
HTR3A-201ENST00000299961 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
HTR3A-201ENST00000299961 FAT2Q9NYQ8 4349 aa7.87□□□□□ -1.15
HTR3A-201ENST00000299961 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
HTR3A-201ENST00000299961 SPINK1P00995 79 aa7.87□□□□□ -1.15
HTR3A-201ENST00000299961 Q5W150 140 aa7.87□□□□□ -1.15
HTR3A-201ENST00000299961 ATP11AUNQ6ZP68 121 aa7.87□□□□□ -1.15
HTR3A-201ENST00000299961 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
HTR3A-201ENST00000299961 HRES1P13985 223 aa7.86□□□□□ -1.15
HTR3A-201ENST00000299961 LCA10Q71F78 164 aa7.85□□□□□ -1.15
HTR3A-201ENST00000299961 SACSQ9NZJ4 4579 aa7.85□□□□□ -1.15
HTR3A-201ENST00000299961 A8MU10 97 aa7.84□□□□□ -1.15
HTR3A-201ENST00000299961 SEC61GP60059 68 aa7.84□□□□□ -1.15
HTR3A-201ENST00000299961 CDC42SE1Q9NRR8 79 aa7.84□□□□□ -1.15
HTR3A-201ENST00000299961 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
HTR3A-201ENST00000299961 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
HTR3A-201ENST00000299961 A6NED7 52 aa7.81□□□□□ -1.16
HTR3A-201ENST00000299961 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
HTR3A-201ENST00000299961 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
HTR3A-201ENST00000299961 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
HTR3A-201ENST00000299961 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
HTR3A-201ENST00000299961 A0A1B0GVY2 172 aa7.77□□□□□ -1.17
HTR3A-201ENST00000299961 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
HTR3A-201ENST00000299961 KTN1-AS1Q86SY8 53 aa7.76□□□□□ -1.17
HTR3A-201ENST00000299961 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
HTR3A-201ENST00000299961 A6NN06 94 aa7.75□□□□□ -1.17
HTR3A-201ENST00000299961 RYR2Q92736 4967 aa7.75□□□□□ -1.17
HTR3A-201ENST00000299961 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
HTR3A-201ENST00000299961 ACYP2P14621 99 aa7.74□□□□□ -1.17
HTR3A-201ENST00000299961 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
HTR3A-201ENST00000299961 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
HTR3A-201ENST00000299961 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
HTR3A-201ENST00000299961 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
HTR3A-201ENST00000299961 SPINK7P58062 85 aa7.69□□□□□ -1.18
HTR3A-201ENST00000299961 RYR3Q15413 4870 aa7.66□□□□□ -1.18
HTR3A-201ENST00000299961 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
HTR3A-201ENST00000299961 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
HTR3A-201ENST00000299961 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
HTR3A-201ENST00000299961 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
HTR3A-201ENST00000299961 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
HTR3A-201ENST00000299961 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
HTR3A-201ENST00000299961 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
HTR3A-201ENST00000299961 A8MUU9 505 aa7.54□□□□□ -1.2
HTR3A-201ENST00000299961 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
HTR3A-201ENST00000299961 A0A1B0GU69 56 aa7.52□□□□□ -1.21
HTR3A-201ENST00000299961 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.21
HTR3A-201ENST00000299961 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
HTR3A-201ENST00000299961 PKHD1L1Q86WI1 4243 aa7.49□□□□□ -1.21
HTR3A-201ENST00000299961 UQCR11O14957 56 aa7.44□□□□□ -1.22
HTR3A-201ENST00000299961 Q5VSD8 79 aa7.42□□□□□ -1.22
HTR3A-201ENST00000299961 Q8N1X5 172 aa7.42□□□□□ -1.22
HTR3A-201ENST00000299961 MIR22HGQ0VDD5 57 aa7.41□□□□□ -1.22
HTR3A-201ENST00000299961 KRTAP10-8P60410 259 aa7.4□□□□□ -1.23
HTR3A-201ENST00000299961 EPPK1P58107 5090 aaKnown RBP7.4□□□□□ -1.23
HTR3A-201ENST00000299961 FAT1Q14517 4588 aa7.39□□□□□ -1.23
HTR3A-201ENST00000299961 FLG2Q5D862 2391 aaPredicted RBP7.33□□□□□ -1.24
HTR3A-201ENST00000299961 RYR1P21817 5038 aa7.29□□□□□ -1.24
HTR3A-201ENST00000299961 HSPG2P98160 4391 aa7.28□□□□□ -1.24
HTR3A-201ENST00000299961 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
HTR3A-201ENST00000299961 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
HTR3A-201ENST00000299961 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
HTR3A-201ENST00000299961 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
HTR3A-201ENST00000299961 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
HTR3A-201ENST00000299961 ADM2Q7Z4H4 148 aa7.24□□□□□ -1.25
HTR3A-201ENST00000299961 TNXBP22105 4242 aa7.23□□□□□ -1.25
HTR3A-201ENST00000299961 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
HTR3A-201ENST00000299961 XP32Q5T750 250 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms