RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
CRAMP1-201ENST00000293925 PP632Q6XCG6 107 aa8.88□□□□□ -0.99
CRAMP1-201ENST00000293925 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
CRAMP1-201ENST00000293925 LAMA1P25391 3075 aa8.86□□□□□ -0.99
CRAMP1-201ENST00000293925 VCANP13611 3396 aa8.85□□□□□ -0.99
CRAMP1-201ENST00000293925 COL6A3P12111 3177 aa8.85□□□□□ -0.99
CRAMP1-201ENST00000293925 SPEGQ15772 3267 aa8.84□□□□□ -0.99
CRAMP1-201ENST00000293925 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
CRAMP1-201ENST00000293925 Q6ZRN7 208 aaPredicted RBP8.83□□□□□ -1
CRAMP1-201ENST00000293925 LRBAP50851 2863 aa8.82□□□□□ -1
CRAMP1-201ENST00000293925 BOD1L1Q8NFC6 3051 aa8.78□□□□□ -1
CRAMP1-201ENST00000293925 P0C880 135 aa8.76□□□□□ -1.01
CRAMP1-201ENST00000293925 KRTAP13-1Q8IUC0 172 aa8.75□□□□□ -1.01
CRAMP1-201ENST00000293925 TACC2O95359 2948 aa8.71□□□□□ -1.01
CRAMP1-201ENST00000293925 H0YAA0 97 aa8.7□□□□□ -1.02
CRAMP1-201ENST00000293925 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
CRAMP1-201ENST00000293925 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
CRAMP1-201ENST00000293925 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
CRAMP1-201ENST00000293925 ZZEF1O43149 2961 aa8.67□□□□□ -1.02
CRAMP1-201ENST00000293925 ATMQ13315 3056 aa8.67□□□□□ -1.02
CRAMP1-201ENST00000293925 CELSR2Q9HCU4 2923 aa8.65□□□□□ -1.03
CRAMP1-201ENST00000293925 SZT2Q5T011 3432 aa8.64□□□□□ -1.03
CRAMP1-201ENST00000293925 NBEAQ8NFP9 2946 aa8.63□□□□□ -1.03
CRAMP1-201ENST00000293925 ADGRG4Q8IZF6 3080 aa8.62□□□□□ -1.03
CRAMP1-201ENST00000293925 FLNCQ14315 2725 aa8.61□□□□□ -1.03
CRAMP1-201ENST00000293925 USP34Q70CQ2 3546 aa8.57□□□□□ -1.04
CRAMP1-201ENST00000293925 TENM1Q9UKZ4 2725 aa8.51□□□□□ -1.05
CRAMP1-201ENST00000293925 DMXL1Q9Y485 3027 aa8.51□□□□□ -1.05
CRAMP1-201ENST00000293925 XP32Q5T750 250 aa8.48□□□□□ -1.05
CRAMP1-201ENST00000293925 NF1P21359 2839 aa8.48□□□□□ -1.05
CRAMP1-201ENST00000293925 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
CRAMP1-201ENST00000293925 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
CRAMP1-201ENST00000293925 EYSQ5T1H1 3165 aa8.44□□□□□ -1.06
CRAMP1-201ENST00000293925 TNRC18O15417 2968 aaPredicted RBP8.41□□□□□ -1.06
CRAMP1-201ENST00000293925 DCHS2Q6V1P9 2916 aa8.39□□□□□ -1.07
CRAMP1-201ENST00000293925 NIPBLQ6KC79 2804 aaeCLIP8.35□□□□□ -1.07
CRAMP1-201ENST00000293925 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
CRAMP1-201ENST00000293925 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
CRAMP1-201ENST00000293925 KRTAP1-4P0C5Y4 121 aa8.28□□□□□ -1.08
CRAMP1-201ENST00000293925 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
CRAMP1-201ENST00000293925 TGP01266 2768 aa8.25□□□□□ -1.09
CRAMP1-201ENST00000293925 WDFY3Q8IZQ1 3526 aa8.22□□□□□ -1.09
CRAMP1-201ENST00000293925 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
CRAMP1-201ENST00000293925 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
CRAMP1-201ENST00000293925 SPTBN5Q9NRC6 3674 aaKnown RBP8.2□□□□□ -1.1
CRAMP1-201ENST00000293925 PDZD2O15018 2839 aa8.19□□□□□ -1.1
CRAMP1-201ENST00000293925 ASPMQ8IZT6 3477 aa8.19□□□□□ -1.1
CRAMP1-201ENST00000293925 LOC400499M0QZD8 3231 aa8.18□□□□□ -1.1
CRAMP1-201ENST00000293925 FBN2P35556 2912 aa8.17□□□□□ -1.1
CRAMP1-201ENST00000293925 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
CRAMP1-201ENST00000293925 PKD1L1Q8TDX9 2849 aa8.13□□□□□ -1.11
CRAMP1-201ENST00000293925 ZANQ9Y493 2812 aa8.12□□□□□ -1.11
CRAMP1-201ENST00000293925 ZFHX4Q86UP3 3567 aa8.12□□□□□ -1.11
CRAMP1-201ENST00000293925 VWFP04275 2813 aa8.07□□□□□ -1.12
CRAMP1-201ENST00000293925 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
CRAMP1-201ENST00000293925 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
CRAMP1-201ENST00000293925 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
CRAMP1-201ENST00000293925 DCHS1Q96JQ0 3298 aa7.95□□□□□ -1.14
CRAMP1-201ENST00000293925 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
CRAMP1-201ENST00000293925 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
CRAMP1-201ENST00000293925 KRTAP21-3Q3LHN1 58 aa7.9□□□□□ -1.14
CRAMP1-201ENST00000293925 LAMA5O15230 3695 aa7.9□□□□□ -1.15
CRAMP1-201ENST00000293925 MXRA5Q9NR99 2828 aa7.8□□□□□ -1.16
CRAMP1-201ENST00000293925 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
CRAMP1-201ENST00000293925 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
CRAMP1-201ENST00000293925 RELNP78509 3460 aa7.75□□□□□ -1.17
CRAMP1-201ENST00000293925 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
CRAMP1-201ENST00000293925 SRRM2Q9UQ35 2752 aaKnown RBP7.74□□□□□ -1.17
CRAMP1-201ENST00000293925 ZFHX3Q15911 3703 aa7.7□□□□□ -1.18
CRAMP1-201ENST00000293925 INE1O15225 51 aa7.69□□□□□ -1.18
CRAMP1-201ENST00000293925 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
CRAMP1-201ENST00000293925 CUBNO60494 3623 aa7.58□□□□□ -1.2
CRAMP1-201ENST00000293925 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
CRAMP1-201ENST00000293925 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
CRAMP1-201ENST00000293925 SMG1Q96Q15 3661 aaKnown RBP7.56□□□□□ -1.2
CRAMP1-201ENST00000293925 SPENQ96T58 3664 aaKnown RBP7.51□□□□□ -1.21
CRAMP1-201ENST00000293925 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
CRAMP1-201ENST00000293925 MEGF8Q7Z7M0 2845 aa7.45□□□□□ -1.22
CRAMP1-201ENST00000293925 FBN1P35555 2871 aaKnown RBP7.39□□□□□ -1.23
CRAMP1-201ENST00000293925 FBN3Q75N90 2809 aa7.36□□□□□ -1.23
CRAMP1-201ENST00000293925 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
CRAMP1-201ENST00000293925 DMDP11532 3685 aa7.32□□□□□ -1.24
CRAMP1-201ENST00000293925 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
CRAMP1-201ENST00000293925 MUC3AQ02505 3323 aa7.18□□□□□ -1.26
CRAMP1-201ENST00000293925 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
CRAMP1-201ENST00000293925 TRRAPQ9Y4A5 3859 aa7.13□□□□□ -1.27
CRAMP1-201ENST00000293925 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
CRAMP1-201ENST00000293925 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CRAMP1-201ENST00000293925 CSMD2Q7Z408 3487 aa7.07□□□□□ -1.28
CRAMP1-201ENST00000293925 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
CRAMP1-201ENST00000293925 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
CRAMP1-201ENST00000293925 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
CRAMP1-201ENST00000293925 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
CRAMP1-201ENST00000293925 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
CRAMP1-201ENST00000293925 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
CRAMP1-201ENST00000293925 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
CRAMP1-201ENST00000293925 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
CRAMP1-201ENST00000293925 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
CRAMP1-201ENST00000293925 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
CRAMP1-201ENST00000293925 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms