RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 H0YAA0 97 aa7.88□□□□□ -1.15
SEC16A-202ENST00000290037 PRUNE2Q8WUY3 3088 aa7.88□□□□□ -1.15
SEC16A-202ENST00000290037 XP32Q5T750 250 aa7.87□□□□□ -1.15
SEC16A-202ENST00000290037 MXRA5Q9NR99 2828 aa7.87□□□□□ -1.15
SEC16A-202ENST00000290037 WDFY4Q6ZS81 3184 aa7.85□□□□□ -1.15
SEC16A-202ENST00000290037 TGP01266 2768 aa7.84□□□□□ -1.15
SEC16A-202ENST00000290037 TRIOO75962 3097 aa7.84□□□□□ -1.15
SEC16A-202ENST00000290037 A8MU10 97 aa7.82□□□□□ -1.16
SEC16A-202ENST00000290037 TACC2O95359 2948 aa7.81□□□□□ -1.16
SEC16A-202ENST00000290037 NBEAQ8NFP9 2946 aa7.81□□□□□ -1.16
SEC16A-202ENST00000290037 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
SEC16A-202ENST00000290037 UTRNP46939 3433 aa7.79□□□□□ -1.16
SEC16A-202ENST00000290037 P0C880 135 aa7.78□□□□□ -1.16
SEC16A-202ENST00000290037 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
SEC16A-202ENST00000290037 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
SEC16A-202ENST00000290037 LAMA1P25391 3075 aa7.71□□□□□ -1.18
SEC16A-202ENST00000290037 ASH1LQ9NR48 2969 aaKnown RBP7.69□□□□□ -1.18
SEC16A-202ENST00000290037 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
SEC16A-202ENST00000290037 TNRC18O15417 2968 aaPredicted RBP7.66□□□□□ -1.18
SEC16A-202ENST00000290037 ATMQ13315 3056 aa7.64□□□□□ -1.19
SEC16A-202ENST00000290037 ADGRG4Q8IZF6 3080 aa7.64□□□□□ -1.19
SEC16A-202ENST00000290037 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
SEC16A-202ENST00000290037 FBN2P35556 2912 aa7.6□□□□□ -1.19
SEC16A-202ENST00000290037 MKI67P46013 3256 aaKnown RBP7.59□□□□□ -1.19
SEC16A-202ENST00000290037 DMXL2Q8TDJ6 3036 aa7.57□□□□□ -1.2
SEC16A-202ENST00000290037 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
SEC16A-202ENST00000290037 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
SEC16A-202ENST00000290037 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
SEC16A-202ENST00000290037 PDZD2O15018 2839 aa7.52□□□□□ -1.21
SEC16A-202ENST00000290037 CELSR1Q9NYQ6 3014 aa7.5□□□□□ -1.21
SEC16A-202ENST00000290037 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
SEC16A-202ENST00000290037 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
SEC16A-202ENST00000290037 VWFP04275 2813 aa7.46□□□□□ -1.21
SEC16A-202ENST00000290037 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
SEC16A-202ENST00000290037 BOD1L1Q8NFC6 3051 aa7.39□□□□□ -1.23
SEC16A-202ENST00000290037 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
SEC16A-202ENST00000290037 EYSQ5T1H1 3165 aa7.3□□□□□ -1.24
SEC16A-202ENST00000290037 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
SEC16A-202ENST00000290037 TENM2Q9NT68 2774 aa7.28□□□□□ -1.24
SEC16A-202ENST00000290037 UNC80Q8N2C7 3258 aa7.26□□□□□ -1.25
SEC16A-202ENST00000290037 XIRP2A4UGR9 3374 aa7.24□□□□□ -1.25
SEC16A-202ENST00000290037 PKD1L1Q8TDX9 2849 aa7.21□□□□□ -1.25
SEC16A-202ENST00000290037 INE1O15225 51 aa7.2□□□□□ -1.26
SEC16A-202ENST00000290037 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
SEC16A-202ENST00000290037 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.26
SEC16A-202ENST00000290037 COL6A3P12111 3177 aa7.14□□□□□ -1.27
SEC16A-202ENST00000290037 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
SEC16A-202ENST00000290037 BRCA2P51587 3418 aa7.12□□□□□ -1.27
SEC16A-202ENST00000290037 CDH23Q9H251 3354 aa7.12□□□□□ -1.27
SEC16A-202ENST00000290037 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
SEC16A-202ENST00000290037 FREM2Q5SZK8 3169 aa7.09□□□□□ -1.27
SEC16A-202ENST00000290037 VCANP13611 3396 aa7.05□□□□□ -1.28
SEC16A-202ENST00000290037 DNAH14Q0VDD8 3507 aa7.05□□□□□ -1.28
SEC16A-202ENST00000290037 CELSR3Q9NYQ7 3312 aa7.05□□□□□ -1.28
SEC16A-202ENST00000290037 REV3LO60673 3130 aa7.03□□□□□ -1.28
SEC16A-202ENST00000290037 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
SEC16A-202ENST00000290037 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
SEC16A-202ENST00000290037 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
SEC16A-202ENST00000290037 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
SEC16A-202ENST00000290037 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
SEC16A-202ENST00000290037 SZT2Q5T011 3432 aa6.91□□□□□ -1.3
SEC16A-202ENST00000290037 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
SEC16A-202ENST00000290037 FBN1P35555 2871 aaKnown RBP6.83□□□□□ -1.32
SEC16A-202ENST00000290037 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
SEC16A-202ENST00000290037 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
SEC16A-202ENST00000290037 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
SEC16A-202ENST00000290037 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
SEC16A-202ENST00000290037 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
SEC16A-202ENST00000290037 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
SEC16A-202ENST00000290037 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.34
SEC16A-202ENST00000290037 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
SEC16A-202ENST00000290037 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
SEC16A-202ENST00000290037 MT1HL1P0DM35 61 aa6.65□□□□□ -1.35
SEC16A-202ENST00000290037 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.35
SEC16A-202ENST00000290037 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
SEC16A-202ENST00000290037 SPEGQ15772 3267 aa6.53□□□□□ -1.36
SEC16A-202ENST00000290037 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
SEC16A-202ENST00000290037 MYO15AQ9UKN7 3530 aa6.51□□□□□ -1.37
SEC16A-202ENST00000290037 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
SEC16A-202ENST00000290037 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
SEC16A-202ENST00000290037 WDFY3Q8IZQ1 3526 aa6.48□□□□□ -1.37
SEC16A-202ENST00000290037 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
SEC16A-202ENST00000290037 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
SEC16A-202ENST00000290037 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
SEC16A-202ENST00000290037 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
SEC16A-202ENST00000290037 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
SEC16A-202ENST00000290037 ASPMQ8IZT6 3477 aa6.31□□□□□ -1.4
SEC16A-202ENST00000290037 ZFHX4Q86UP3 3567 aa6.28□□□□□ -1.4
SEC16A-202ENST00000290037 DMDP11532 3685 aa6.28□□□□□ -1.4
SEC16A-202ENST00000290037 ANK3Q12955 4377 aaKnown RBP6.26□□□□□ -1.41
SEC16A-202ENST00000290037 LAMA5O15230 3695 aa6.22□□□□□ -1.41
SEC16A-202ENST00000290037 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
SEC16A-202ENST00000290037 RELNP78509 3460 aa6.19□□□□□ -1.42
SEC16A-202ENST00000290037 DNAH3Q8TD57 4116 aa6.18□□□□□ -1.42
SEC16A-202ENST00000290037 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
SEC16A-202ENST00000290037 SMG1Q96Q15 3661 aaKnown RBP6.17□□□□□ -1.42
SEC16A-202ENST00000290037 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
SEC16A-202ENST00000290037 VPS13CQ709C8 3753 aa6.16□□□□□ -1.42
SEC16A-202ENST00000290037 CUBNO60494 3623 aa6.14□□□□□ -1.43
SEC16A-202ENST00000290037 CSMD1Q96PZ7 3565 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms