RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
RAB28-201ENST00000288723 C9JAW5 83 aa10.74□□□□□ -0.69
RAB28-201ENST00000288723 ETDBQ3ZM63 59 aa10.74□□□□□ -0.69
RAB28-201ENST00000288723 A8MUU9 505 aa10.72□□□□□ -0.69
RAB28-201ENST00000288723 NOTCH2NLQ7Z3S9 236 aa10.71□□□□□ -0.69
RAB28-201ENST00000288723 LINC00313P59037 77 aa10.7□□□□□ -0.7
RAB28-201ENST00000288723 MT1HP80294 61 aa10.7□□□□□ -0.7
RAB28-201ENST00000288723 KRTAP9-2Q9BYQ4 174 aa10.69□□□□□ -0.7
RAB28-201ENST00000288723 LYRM7Q5U5X0 104 aa10.68□□□□□ -0.7
RAB28-201ENST00000288723 IGHV6-1A0A0B4J1U7 121 aa10.67□□□□□ -0.7
RAB28-201ENST00000288723 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
RAB28-201ENST00000288723 JMJD7-PLA2G4BH0Y9G9 81 aa10.66□□□□□ -0.7
RAB28-201ENST00000288723 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.7
RAB28-201ENST00000288723 Q6ZQT0 140 aa10.65□□□□□ -0.7
RAB28-201ENST00000288723 COX6B2Q6YFQ2 88 aa10.65□□□□□ -0.71
RAB28-201ENST00000288723 C14orf132Q9NPU4 83 aa10.63□□□□□ -0.71
RAB28-201ENST00000288723 LOC110117498A0A087WWA1 95 aa10.62□□□□□ -0.71
RAB28-201ENST00000288723 A0A1B0GVX0 72 aa10.59□□□□□ -0.71
RAB28-201ENST00000288723 MT-ATP8P03928 68 aa10.59□□□□□ -0.71
RAB28-201ENST00000288723 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
RAB28-201ENST00000288723 ANAPC13Q9BS18 74 aa10.58□□□□□ -0.72
RAB28-201ENST00000288723 PDE6GP18545 87 aa10.56□□□□□ -0.72
RAB28-201ENST00000288723 J3KT08 172 aa10.55□□□□□ -0.72
RAB28-201ENST00000288723 C8orf87E5RJ46 101 aa10.53□□□□□ -0.72
RAB28-201ENST00000288723 M0R2T5 61 aa10.52□□□□□ -0.73
RAB28-201ENST00000288723 A0A1B0GW54 56 aa10.51□□□□□ -0.73
RAB28-201ENST00000288723 H3BT86 120 aa10.5□□□□□ -0.73
RAB28-201ENST00000288723 FLGP20930 4061 aaPredicted RBP10.5□□□□□ -0.73
RAB28-201ENST00000288723 NDUFB1O75438 58 aa10.48□□□□□ -0.73
RAB28-201ENST00000288723 KRTAP10-6P60371 365 aaPredicted RBP10.47□□□□□ -0.73
RAB28-201ENST00000288723 A8MWP4 228 aa10.45□□□□□ -0.74
RAB28-201ENST00000288723 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
RAB28-201ENST00000288723 NREPQ16612 68 aa10.45□□□□□ -0.74
RAB28-201ENST00000288723 IGKV3D-7A0A0C4DH55 119 aa10.44□□□□□ -0.74
RAB28-201ENST00000288723 C8orf17Q9NRJ1 99 aa10.42□□□□□ -0.74
RAB28-201ENST00000288723 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
RAB28-201ENST00000288723 PRR15Q8IV56 129 aa10.37□□□□□ -0.75
RAB28-201ENST00000288723 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
RAB28-201ENST00000288723 ZCCHC13Q8WW36 166 aaKnown RBP10.37□□□□□ -0.75
RAB28-201ENST00000288723 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
RAB28-201ENST00000288723 HRES1P13985 223 aa10.35□□□□□ -0.75
RAB28-201ENST00000288723 Q6ZVQ6 151 aa10.33□□□□□ -0.76
RAB28-201ENST00000288723 SMIM20Q8N5G0 67 aa10.33□□□□□ -0.76
RAB28-201ENST00000288723 FAM240AA0A1B0GVK7 77 aa10.33□□□□□ -0.76
RAB28-201ENST00000288723 FAM236DA0A1B0GTK5 79 aa10.31□□□□□ -0.76
RAB28-201ENST00000288723 FAM236CP0DP71 79 aa10.31□□□□□ -0.76
RAB28-201ENST00000288723 K7EQZ3 153 aa10.3□□□□□ -0.76
RAB28-201ENST00000288723 MPLKIPQ8TAP9 179 aa10.3□□□□□ -0.76
RAB28-201ENST00000288723 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
RAB28-201ENST00000288723 RBM12B-AS1Q9P1G2 102 aa10.28□□□□□ -0.76
RAB28-201ENST00000288723 SPINK7P58062 85 aa10.28□□□□□ -0.76
RAB28-201ENST00000288723 FSIP2Q5CZC0 6907 aa10.27□□□□□ -0.77
RAB28-201ENST00000288723 KRTAP9-6A0A140TA67 174 aa10.27□□□□□ -0.77
RAB28-201ENST00000288723 BPY2O14599 106 aa10.27□□□□□ -0.77
RAB28-201ENST00000288723 IMUPQ9GZP8 106 aa10.27□□□□□ -0.77
RAB28-201ENST00000288723 MRPL34Q9BQ48 92 aaKnown RBP10.24□□□□□ -0.77
RAB28-201ENST00000288723 ACYP1P07311 99 aa10.23□□□□□ -0.77
RAB28-201ENST00000288723 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
RAB28-201ENST00000288723 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
RAB28-201ENST00000288723 Q8N9L7 120 aa10.21□□□□□ -0.77
RAB28-201ENST00000288723 NDUFS5O43920 106 aa10.18□□□□□ -0.78
RAB28-201ENST00000288723 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
RAB28-201ENST00000288723 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
RAB28-201ENST00000288723 KRTAP9-8Q9BYQ0 159 aa10.14□□□□□ -0.79
RAB28-201ENST00000288723 UQCRQO14949 82 aa10.14□□□□□ -0.79
RAB28-201ENST00000288723 LINC00643Q86TS7 51 aa10.13□□□□□ -0.79
RAB28-201ENST00000288723 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
RAB28-201ENST00000288723 CRCT1Q9UGL9 99 aa10.12□□□□□ -0.79
RAB28-201ENST00000288723 C5orf47Q569G3 176 aa10.11□□□□□ -0.79
RAB28-201ENST00000288723 RPS28P62857 69 aaKnown RBP10.1□□□□□ -0.79
RAB28-201ENST00000288723 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
RAB28-201ENST00000288723 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
RAB28-201ENST00000288723 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
RAB28-201ENST00000288723 Q5W150 140 aa10.07□□□□□ -0.8
RAB28-201ENST00000288723 HCG22E2RYF7 251 aa10.05□□□□□ -0.8
RAB28-201ENST00000288723 COX7CP15954 63 aa10.04□□□□□ -0.8
RAB28-201ENST00000288723 MT2AP02795 61 aa10.02□□□□□ -0.81
RAB28-201ENST00000288723 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
RAB28-201ENST00000288723 ATOX1O00244 68 aa10.01□□□□□ -0.81
RAB28-201ENST00000288723 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
RAB28-201ENST00000288723 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
RAB28-201ENST00000288723 MT1FP04733 61 aa9.95□□□□□ -0.82
RAB28-201ENST00000288723 TMEM258P61165 79 aa9.95□□□□□ -0.82
RAB28-201ENST00000288723 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
RAB28-201ENST00000288723 CXCL6P80162 114 aa9.93□□□□□ -0.82
RAB28-201ENST00000288723 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
RAB28-201ENST00000288723 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
RAB28-201ENST00000288723 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
RAB28-201ENST00000288723 USH2AO75445 5202 aa9.85□□□□□ -0.83
RAB28-201ENST00000288723 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
RAB28-201ENST00000288723 KRTAP9-3Q9BYQ3 159 aa9.82□□□□□ -0.84
RAB28-201ENST00000288723 ATP5EP2Q5VTU8 51 aa9.77□□□□□ -0.84
RAB28-201ENST00000288723 LCE2BO14633 110 aa9.77□□□□□ -0.85
RAB28-201ENST00000288723 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
RAB28-201ENST00000288723 SSPOA2VEC9 5147 aa9.75□□□□□ -0.85
RAB28-201ENST00000288723 CYSTM1Q9H1C7 97 aa9.74□□□□□ -0.85
RAB28-201ENST00000288723 KRTAP3-1Q9BYR8 98 aa9.69□□□□□ -0.86
RAB28-201ENST00000288723 A0A087WVE0 104 aa9.66□□□□□ -0.86
RAB28-201ENST00000288723 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.86
RAB28-201ENST00000288723 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms