RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
CACNA1D-201ENST00000288139 TENM4Q6N022 2769 aa5.35□□□□□ -1.55
CACNA1D-201ENST00000288139 TRRAPQ9Y4A5 3859 aa5.35□□□□□ -1.55
CACNA1D-201ENST00000288139 LCE6AA0A183 80 aa5.34□□□□□ -1.56
CACNA1D-201ENST00000288139 H3BS24 57 aa5.32□□□□□ -1.56
CACNA1D-201ENST00000288139 Q5VV11 94 aa5.32□□□□□ -1.56
CACNA1D-201ENST00000288139 KRTAP10-9P60411 292 aa5.31□□□□□ -1.56
CACNA1D-201ENST00000288139 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
CACNA1D-201ENST00000288139 ROMO1P60602 79 aa5.29□□□□□ -1.56
CACNA1D-201ENST00000288139 Q6ZR54 194 aa5.29□□□□□ -1.56
CACNA1D-201ENST00000288139 Q5VSD8 79 aa5.29□□□□□ -1.56
CACNA1D-201ENST00000288139 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
CACNA1D-201ENST00000288139 KRTAP24-1Q3LI83 254 aa5.29□□□□□ -1.56
CACNA1D-201ENST00000288139 A0A1W2PNN7 141 aa5.28□□□□□ -1.56
CACNA1D-201ENST00000288139 LINC00472Q9H8W2 130 aa5.28□□□□□ -1.56
CACNA1D-201ENST00000288139 OXTP01178 125 aa5.27□□□□□ -1.57
CACNA1D-201ENST00000288139 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
CACNA1D-201ENST00000288139 COL12A1Q99715 3063 aa5.26□□□□□ -1.57
CACNA1D-201ENST00000288139 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
CACNA1D-201ENST00000288139 M0QZ58 72 aa5.25□□□□□ -1.57
CACNA1D-201ENST00000288139 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
CACNA1D-201ENST00000288139 FBN2P35556 2912 aa5.22□□□□□ -1.57
CACNA1D-201ENST00000288139 VWFP04275 2813 aa5.22□□□□□ -1.57
CACNA1D-201ENST00000288139 K7EIL1 84 aa5.21□□□□□ -1.57
CACNA1D-201ENST00000288139 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.57
CACNA1D-201ENST00000288139 CUBNO60494 3623 aa5.21□□□□□ -1.58
CACNA1D-201ENST00000288139 PDZD2O15018 2839 aa5.21□□□□□ -1.58
CACNA1D-201ENST00000288139 P0C880 135 aa5.2□□□□□ -1.58
CACNA1D-201ENST00000288139 ANAPC11Q9NYG5 84 aa5.2□□□□□ -1.58
CACNA1D-201ENST00000288139 ANK2Q01484 3957 aa5.2□□□□□ -1.58
CACNA1D-201ENST00000288139 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
CACNA1D-201ENST00000288139 DNAH3Q8TD57 4116 aa5.18□□□□□ -1.58
CACNA1D-201ENST00000288139 LYSTQ99698 3801 aa5.18□□□□□ -1.58
CACNA1D-201ENST00000288139 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
CACNA1D-201ENST00000288139 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
CACNA1D-201ENST00000288139 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
CACNA1D-201ENST00000288139 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
CACNA1D-201ENST00000288139 TGP01266 2768 aa5.12□□□□□ -1.59
CACNA1D-201ENST00000288139 CASC10Q5T4H9 136 aa5.12□□□□□ -1.59
CACNA1D-201ENST00000288139 A6NN06 94 aa5.12□□□□□ -1.59
CACNA1D-201ENST00000288139 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
CACNA1D-201ENST00000288139 Q5W150 140 aa5.1□□□□□ -1.59
CACNA1D-201ENST00000288139 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
CACNA1D-201ENST00000288139 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
CACNA1D-201ENST00000288139 Q8NDZ9 215 aa5.07□□□□□ -1.6
CACNA1D-201ENST00000288139 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
CACNA1D-201ENST00000288139 KRTAP26-1Q6PEX3 210 aa5.06□□□□□ -1.6
CACNA1D-201ENST00000288139 TNP1P09430 55 aa5.04□□□□□ -1.6
CACNA1D-201ENST00000288139 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
CACNA1D-201ENST00000288139 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
CACNA1D-201ENST00000288139 OTOGQ6ZRI0 2925 aa5.04□□□□□ -1.6
CACNA1D-201ENST00000288139 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
CACNA1D-201ENST00000288139 PANO1I0J062 215 aa5.03□□□□□ -1.6
CACNA1D-201ENST00000288139 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
CACNA1D-201ENST00000288139 ANK3Q12955 4377 aaKnown RBP5.01□□□□□ -1.61
CACNA1D-201ENST00000288139 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
CACNA1D-201ENST00000288139 CSMD3Q7Z407 3707 aa4.99□□□□□ -1.61
CACNA1D-201ENST00000288139 A8MUU9 505 aa4.97□□□□□ -1.61
CACNA1D-201ENST00000288139 PRAC1Q96KF2 57 aa4.96□□□□□ -1.61
CACNA1D-201ENST00000288139 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
CACNA1D-201ENST00000288139 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
CACNA1D-201ENST00000288139 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
CACNA1D-201ENST00000288139 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CACNA1D-201ENST00000288139 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
CACNA1D-201ENST00000288139 KRTAP10-3P60369 221 aa4.92□□□□□ -1.62
CACNA1D-201ENST00000288139 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
CACNA1D-201ENST00000288139 KRTAP13-1Q8IUC0 172 aa4.87□□□□□ -1.63
CACNA1D-201ENST00000288139 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
CACNA1D-201ENST00000288139 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
CACNA1D-201ENST00000288139 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
CACNA1D-201ENST00000288139 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
CACNA1D-201ENST00000288139 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
CACNA1D-201ENST00000288139 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
CACNA1D-201ENST00000288139 DYNC2H1Q8NCM8 4307 aaKnown RBP4.73□□□□□ -1.65
CACNA1D-201ENST00000288139 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
CACNA1D-201ENST00000288139 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
CACNA1D-201ENST00000288139 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
CACNA1D-201ENST00000288139 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
CACNA1D-201ENST00000288139 MEGF8Q7Z7M0 2845 aa4.67□□□□□ -1.66
CACNA1D-201ENST00000288139 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
CACNA1D-201ENST00000288139 PRKDCP78527 4128 aaKnown RBP4.64□□□□□ -1.67
CACNA1D-201ENST00000288139 DNAH6Q9C0G6 4158 aa4.63□□□□□ -1.67
CACNA1D-201ENST00000288139 FBN1P35555 2871 aaKnown RBP4.61□□□□□ -1.67
CACNA1D-201ENST00000288139 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
CACNA1D-201ENST00000288139 KRTAP13-2Q52LG2 175 aa4.57□□□□□ -1.68
CACNA1D-201ENST00000288139 A8MU10 97 aa4.56□□□□□ -1.68
CACNA1D-201ENST00000288139 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
CACNA1D-201ENST00000288139 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
CACNA1D-201ENST00000288139 H0YAA0 97 aa4.52□□□□□ -1.69
CACNA1D-201ENST00000288139 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
CACNA1D-201ENST00000288139 KRTAP21-3Q3LHN1 58 aa4.48□□□□□ -1.69
CACNA1D-201ENST00000288139 DNHD1Q96M86 4753 aa4.47□□□□□ -1.69
CACNA1D-201ENST00000288139 KRTAP1-4P0C5Y4 121 aa4.42□□□□□ -1.7
CACNA1D-201ENST00000288139 PKD1P98161 4303 aa4.42□□□□□ -1.7
CACNA1D-201ENST00000288139 TPRXLQ17RH7 258 aa4.41□□□□□ -1.7
CACNA1D-201ENST00000288139 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.71
CACNA1D-201ENST00000288139 A0A1B0GVY2 172 aa4.36□□□□□ -1.71
CACNA1D-201ENST00000288139 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.71
CACNA1D-201ENST00000288139 FAT2Q9NYQ8 4349 aa4.34□□□□□ -1.71
CACNA1D-201ENST00000288139 DNAH2Q9P225 4427 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms