RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
PDLIM3-201ENST00000284767 MOBPQ13875 183 aa11.01□□□□□ -0.65
PDLIM3-201ENST00000284767 COA5Q86WW8 74 aa11□□□□□ -0.65
PDLIM3-201ENST00000284767 Q96NJ1 140 aa11□□□□□ -0.65
PDLIM3-201ENST00000284767 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
PDLIM3-201ENST00000284767 PRR15LQ9BU68 103 aa10.99□□□□□ -0.65
PDLIM3-201ENST00000284767 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
PDLIM3-201ENST00000284767 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
PDLIM3-201ENST00000284767 KRTAP10-1P60331 282 aa10.96□□□□□ -0.66
PDLIM3-201ENST00000284767 LRP1BQ9NZR2 4599 aa10.95□□□□□ -0.66
PDLIM3-201ENST00000284767 LOC101927531A0A1B0GV80 90 aa10.95□□□□□ -0.66
PDLIM3-201ENST00000284767 SEC61GP60059 68 aa10.95□□□□□ -0.66
PDLIM3-201ENST00000284767 Q75L30 129 aa10.95□□□□□ -0.66
PDLIM3-201ENST00000284767 IGLV9-49A0A0B4J1Y8 123 aa10.94□□□□□ -0.66
PDLIM3-201ENST00000284767 C8orf17Q9NRJ1 99 aa10.94□□□□□ -0.66
PDLIM3-201ENST00000284767 LINC00483Q53H64 154 aa10.92□□□□□ -0.66
PDLIM3-201ENST00000284767 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
PDLIM3-201ENST00000284767 ZNF861PO60384 105 aa10.92□□□□□ -0.66
PDLIM3-201ENST00000284767 CD164Q04900 197 aa10.92□□□□□ -0.66
PDLIM3-201ENST00000284767 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
PDLIM3-201ENST00000284767 A8MU10 97 aa10.91□□□□□ -0.66
PDLIM3-201ENST00000284767 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
PDLIM3-201ENST00000284767 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
PDLIM3-201ENST00000284767 ZNF706Q9Y5V0 76 aaPredicted RBP10.87□□□□□ -0.67
PDLIM3-201ENST00000284767 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
PDLIM3-201ENST00000284767 Q6ZSA8 131 aa10.85□□□□□ -0.67
PDLIM3-201ENST00000284767 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
PDLIM3-201ENST00000284767 LINC01558Q9Y6Z2 57 aa10.84□□□□□ -0.67
PDLIM3-201ENST00000284767 A6NED7 52 aa10.84□□□□□ -0.67
PDLIM3-201ENST00000284767 NDUFS5O43920 106 aa10.84□□□□□ -0.67
PDLIM3-201ENST00000284767 MRPL34Q9BQ48 92 aaKnown RBP10.84□□□□□ -0.67
PDLIM3-201ENST00000284767 ATP11AUNQ6ZP68 121 aa10.83□□□□□ -0.68
PDLIM3-201ENST00000284767 LCA10Q71F78 164 aa10.83□□□□□ -0.68
PDLIM3-201ENST00000284767 KMT2CQ8NEZ4 4911 aaKnown RBP10.81□□□□□ -0.68
PDLIM3-201ENST00000284767 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
PDLIM3-201ENST00000284767 CDC42SE1Q9NRR8 79 aa10.78□□□□□ -0.68
PDLIM3-201ENST00000284767 SPAG11AQ6PDA7 123 aa10.78□□□□□ -0.68
PDLIM3-201ENST00000284767 HRES1P13985 223 aa10.77□□□□□ -0.68
PDLIM3-201ENST00000284767 SPTSSBQ8NFR3 76 aa10.77□□□□□ -0.69
PDLIM3-201ENST00000284767 RYR2Q92736 4967 aa10.75□□□□□ -0.69
PDLIM3-201ENST00000284767 KTN1-AS1Q86SY8 53 aa10.74□□□□□ -0.69
PDLIM3-201ENST00000284767 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
PDLIM3-201ENST00000284767 A0A087X002 238 aa10.72□□□□□ -0.69
PDLIM3-201ENST00000284767 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
PDLIM3-201ENST00000284767 A6NN06 94 aa10.69□□□□□ -0.7
PDLIM3-201ENST00000284767 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
PDLIM3-201ENST00000284767 Q5W150 140 aa10.63□□□□□ -0.71
PDLIM3-201ENST00000284767 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
PDLIM3-201ENST00000284767 SPINK7P58062 85 aa10.62□□□□□ -0.71
PDLIM3-201ENST00000284767 SMR3BP02814 79 aaPredicted RBP10.61□□□□□ -0.71
PDLIM3-201ENST00000284767 KRTAP13-2Q52LG2 175 aa10.61□□□□□ -0.71
PDLIM3-201ENST00000284767 SPINK6Q6UWN8 80 aa10.61□□□□□ -0.71
PDLIM3-201ENST00000284767 FAT1Q14517 4588 aa10.6□□□□□ -0.71
PDLIM3-201ENST00000284767 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
PDLIM3-201ENST00000284767 ACYP2P14621 99 aa10.59□□□□□ -0.71
PDLIM3-201ENST00000284767 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
PDLIM3-201ENST00000284767 KRTAP1-4P0C5Y4 121 aa10.58□□□□□ -0.72
PDLIM3-201ENST00000284767 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
PDLIM3-201ENST00000284767 C7orf65Q6ZTY9 151 aa10.53□□□□□ -0.72
PDLIM3-201ENST00000284767 SSBP3-AS1Q7Z2R9 100 aa10.53□□□□□ -0.72
PDLIM3-201ENST00000284767 RBM12B-AS1Q9P1G2 102 aa10.52□□□□□ -0.73
PDLIM3-201ENST00000284767 RYR3Q15413 4870 aa10.52□□□□□ -0.73
PDLIM3-201ENST00000284767 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
PDLIM3-201ENST00000284767 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
PDLIM3-201ENST00000284767 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
PDLIM3-201ENST00000284767 LINC00313P59037 77 aa10.46□□□□□ -0.74
PDLIM3-201ENST00000284767 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
PDLIM3-201ENST00000284767 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
PDLIM3-201ENST00000284767 KRTAP10-4P60372 401 aaPredicted RBP10.39□□□□□ -0.75
PDLIM3-201ENST00000284767 A0A1B0GU69 56 aa10.37□□□□□ -0.75
PDLIM3-201ENST00000284767 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
PDLIM3-201ENST00000284767 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
PDLIM3-201ENST00000284767 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
PDLIM3-201ENST00000284767 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
PDLIM3-201ENST00000284767 HSPG2P98160 4391 aa10.27□□□□□ -0.76
PDLIM3-201ENST00000284767 LINC00304Q8N9R0 145 aa10.24□□□□□ -0.77
PDLIM3-201ENST00000284767 SPINK1P00995 79 aa10.23□□□□□ -0.77
PDLIM3-201ENST00000284767 UQCR11O14957 56 aa10.23□□□□□ -0.77
PDLIM3-201ENST00000284767 PKHD1L1Q86WI1 4243 aa10.22□□□□□ -0.77
PDLIM3-201ENST00000284767 MIR22HGQ0VDD5 57 aa10.21□□□□□ -0.77
PDLIM3-201ENST00000284767 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
PDLIM3-201ENST00000284767 IGKV2D-30A0A075B6S6 120 aa10.2□□□□□ -0.78
PDLIM3-201ENST00000284767 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
PDLIM3-201ENST00000284767 RYR1P21817 5038 aa10.18□□□□□ -0.78
PDLIM3-201ENST00000284767 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
PDLIM3-201ENST00000284767 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
PDLIM3-201ENST00000284767 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
PDLIM3-201ENST00000284767 Q5VSD8 79 aa10.13□□□□□ -0.79
PDLIM3-201ENST00000284767 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
PDLIM3-201ENST00000284767 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
PDLIM3-201ENST00000284767 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
PDLIM3-201ENST00000284767 TNXBP22105 4242 aa10.06□□□□□ -0.8
PDLIM3-201ENST00000284767 Q8N1X5 172 aa10.02□□□□□ -0.81
PDLIM3-201ENST00000284767 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
PDLIM3-201ENST00000284767 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
PDLIM3-201ENST00000284767 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
PDLIM3-201ENST00000284767 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
PDLIM3-201ENST00000284767 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
PDLIM3-201ENST00000284767 KRTAP10-8P60410 259 aa9.93□□□□□ -0.82
PDLIM3-201ENST00000284767 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms