RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 SMG1Q96Q15 3661 aaKnown RBP12.89□□□□□ -0.35
USP12-201ENST00000282344 A0A087X002 238 aa12.88□□□□□ -0.35
USP12-201ENST00000282344 NOTCH2NLQ7Z3S9 236 aa12.88□□□□□ -0.35
USP12-201ENST00000282344 A0A1B0GU33 70 aa12.87□□□□□ -0.35
USP12-201ENST00000282344 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
USP12-201ENST00000282344 CRIPTQ9P021 101 aa12.86□□□□□ -0.35
USP12-201ENST00000282344 Q6ZR54 194 aa12.86□□□□□ -0.35
USP12-201ENST00000282344 TENM3Q9P273 2699 aa12.85□□□□□ -0.35
USP12-201ENST00000282344 KRTAP10-2P60368 255 aa12.83□□□□□ -0.36
USP12-201ENST00000282344 LCE6AA0A183 80 aa12.8□□□□□ -0.36
USP12-201ENST00000282344 KRTAP10-1P60331 282 aa12.77□□□□□ -0.37
USP12-201ENST00000282344 LINC01554Q52M75 96 aa12.76□□□□□ -0.37
USP12-201ENST00000282344 DMAC1Q96GE9 116 aa12.76□□□□□ -0.37
USP12-201ENST00000282344 CUBNO60494 3623 aa12.72□□□□□ -0.37
USP12-201ENST00000282344 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
USP12-201ENST00000282344 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
USP12-201ENST00000282344 Q6ZRN7 208 aaPredicted RBP12.67□□□□□ -0.38
USP12-201ENST00000282344 PDZD2O15018 2839 aa12.67□□□□□ -0.38
USP12-201ENST00000282344 J3QL48 77 aa12.64□□□□□ -0.39
USP12-201ENST00000282344 A8MU10 97 aa12.64□□□□□ -0.39
USP12-201ENST00000282344 CSAG1Q6PB30 78 aa12.64□□□□□ -0.39
USP12-201ENST00000282344 COX6B2Q6YFQ2 88 aa12.64□□□□□ -0.39
USP12-201ENST00000282344 VWFP04275 2813 aa12.6□□□□□ -0.39
USP12-201ENST00000282344 KRTAP13-1Q8IUC0 172 aa12.58□□□□□ -0.39
USP12-201ENST00000282344 FBN1P35555 2871 aaKnown RBP12.58□□□□□ -0.4
USP12-201ENST00000282344 Q6ZSA8 131 aa12.51□□□□□ -0.41
USP12-201ENST00000282344 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
USP12-201ENST00000282344 ASB16-AS1Q495Z4 193 aa12.4□□□□□ -0.42
USP12-201ENST00000282344 KRTAP13-2Q52LG2 175 aa12.4□□□□□ -0.43
USP12-201ENST00000282344 A6NN06 94 aa12.39□□□□□ -0.43
USP12-201ENST00000282344 S4R3F8 94 aa12.38□□□□□ -0.43
USP12-201ENST00000282344 SPATA8Q6RVD6 105 aa12.37□□□□□ -0.43
USP12-201ENST00000282344 TGP01266 2768 aa12.35□□□□□ -0.43
USP12-201ENST00000282344 H1FX-AS1Q4G0G2 97 aa12.33□□□□□ -0.44
USP12-201ENST00000282344 OTOGQ6ZRI0 2925 aa12.32□□□□□ -0.44
USP12-201ENST00000282344 RPL37P61927 97 aaKnown RBP12.3□□□□□ -0.44
USP12-201ENST00000282344 ADM2Q7Z4H4 148 aa12.27□□□□□ -0.45
USP12-201ENST00000282344 H3BS24 57 aa12.25□□□□□ -0.45
USP12-201ENST00000282344 SPENQ96T58 3664 aaKnown RBP12.22□□□□□ -0.45
USP12-201ENST00000282344 Q5VSD8 79 aa12.22□□□□□ -0.45
USP12-201ENST00000282344 CAMK2N1Q7Z7J9 78 aa12.21□□□□□ -0.45
USP12-201ENST00000282344 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
USP12-201ENST00000282344 ROMO1P60602 79 aa12.16□□□□□ -0.46
USP12-201ENST00000282344 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.46
USP12-201ENST00000282344 R4GN34 69 aa12.14□□□□□ -0.47
USP12-201ENST00000282344 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
USP12-201ENST00000282344 ZFHX3Q15911 3703 aa12.1□□□□□ -0.47
USP12-201ENST00000282344 LUZP6Q538Z0 58 aa12.07□□□□□ -0.48
USP12-201ENST00000282344 RPS29P62273 56 aaKnown RBP12.03□□□□□ -0.48
USP12-201ENST00000282344 M0QZ58 72 aa11.98□□□□□ -0.49
USP12-201ENST00000282344 SRRM2Q9UQ35 2752 aaKnown RBP11.93□□□□□ -0.5
USP12-201ENST00000282344 KRTAP25-1Q3LHN0 102 aa11.91□□□□□ -0.5
USP12-201ENST00000282344 SEC61BP60468 96 aaKnown RBP11.89□□□□□ -0.51
USP12-201ENST00000282344 KRTAP1-4P0C5Y4 121 aa11.89□□□□□ -0.51
USP12-201ENST00000282344 M0R2T5 61 aa11.83□□□□□ -0.52
USP12-201ENST00000282344 A8MUU9 505 aa11.82□□□□□ -0.52
USP12-201ENST00000282344 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
USP12-201ENST00000282344 C20orf166-AS1Q96NR2 134 aa11.78□□□□□ -0.52
USP12-201ENST00000282344 BSNQ9UPA5 3926 aa11.73□□□□□ -0.53
USP12-201ENST00000282344 TRRAPQ9Y4A5 3859 aa11.71□□□□□ -0.53
USP12-201ENST00000282344 KRTAP16-1A8MUX0 517 aa11.7□□□□□ -0.54
USP12-201ENST00000282344 H0YAA0 97 aa11.6□□□□□ -0.55
USP12-201ENST00000282344 KRTAP13-3Q3SY46 172 aa11.58□□□□□ -0.56
USP12-201ENST00000282344 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.57
USP12-201ENST00000282344 COL7A1Q02388 2944 aa11.52□□□□□ -0.57
USP12-201ENST00000282344 A0A0A0MQY5 61 aa11.47□□□□□ -0.57
USP12-201ENST00000282344 NDUFAF8A1L188 74 aa11.45□□□□□ -0.58
USP12-201ENST00000282344 XP32Q5T750 250 aa11.42□□□□□ -0.58
USP12-201ENST00000282344 C10orf95Q9H7T3 257 aa11.41□□□□□ -0.58
USP12-201ENST00000282344 VPS13CQ709C8 3753 aa11.4□□□□□ -0.58
USP12-201ENST00000282344 ANK3Q12955 4377 aaKnown RBP11.39□□□□□ -0.59
USP12-201ENST00000282344 PLAC4Q8WY50 150 aa11.26□□□□□ -0.61
USP12-201ENST00000282344 P0C880 135 aa11.24□□□□□ -0.61
USP12-201ENST00000282344 KRTAP21-3Q3LHN1 58 aa11.23□□□□□ -0.61
USP12-201ENST00000282344 TNP1P09430 55 aa11□□□□□ -0.65
USP12-201ENST00000282344 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
USP12-201ENST00000282344 ZNF469Q96JG9 3925 aaPredicted RBP10.99□□□□□ -0.65
USP12-201ENST00000282344 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
USP12-201ENST00000282344 CSMD3Q7Z407 3707 aa10.97□□□□□ -0.65
USP12-201ENST00000282344 KRTAP10-8P60410 259 aa10.96□□□□□ -0.65
USP12-201ENST00000282344 A0A1B0GVY2 172 aa10.92□□□□□ -0.66
USP12-201ENST00000282344 KRTAP12-2P59991 146 aa10.81□□□□□ -0.68
USP12-201ENST00000282344 PP632Q6XCG6 107 aa10.79□□□□□ -0.68
USP12-201ENST00000282344 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.7
USP12-201ENST00000282344 KRTAP12-1P59990 96 aa10.65□□□□□ -0.7
USP12-201ENST00000282344 KRTAP10-6P60371 365 aaPredicted RBP10.63□□□□□ -0.71
USP12-201ENST00000282344 HUWE1Q7Z6Z7 4374 aaKnown RBP10.6□□□□□ -0.71
USP12-201ENST00000282344 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
USP12-201ENST00000282344 KRTAP10-10P60014 251 aa10.43□□□□□ -0.74
USP12-201ENST00000282344 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
USP12-201ENST00000282344 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
USP12-201ENST00000282344 KRTAP10-4P60372 401 aaPredicted RBP10.25□□□□□ -0.77
USP12-201ENST00000282344 MT1HL1P0DM35 61 aa10.21□□□□□ -0.77
USP12-201ENST00000282344 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
USP12-201ENST00000282344 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.78
USP12-201ENST00000282344 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
USP12-201ENST00000282344 DNAH11Q96DT5 4516 aa10.11□□□□□ -0.79
USP12-201ENST00000282344 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
USP12-201ENST00000282344 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
USP12-201ENST00000282344 PRO2289Q9P1D8 64 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms