RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 LINC00472Q9H8W2 130 aa13.25□□□□□ -0.29
CTF1-201ENST00000279804 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
CTF1-201ENST00000279804 BPY2O14599 106 aa13.23□□□□□ -0.29
CTF1-201ENST00000279804 HIST1H4AP62805 103 aaKnown RBP13.21□□□□□ -0.3
CTF1-201ENST00000279804 TPRXLQ17RH7 258 aa13.2□□□□□ -0.3
CTF1-201ENST00000279804 FAM236AA0A1B0GUQ0 79 aa13.16□□□□□ -0.3
CTF1-201ENST00000279804 FAM236BA0A1B0GV22 79 aa13.16□□□□□ -0.3
CTF1-201ENST00000279804 KRTAP13-3Q3SY46 172 aa13.16□□□□□ -0.3
CTF1-201ENST00000279804 UBR4Q5T4S7 5183 aa13.15□□□□□ -0.3
CTF1-201ENST00000279804 IGKV4-1P06312 121 aa13.14□□□□□ -0.31
CTF1-201ENST00000279804 A0A087WVE0 104 aa13.12□□□□□ -0.31
CTF1-201ENST00000279804 J3KT08 172 aa13.09□□□□□ -0.31
CTF1-201ENST00000279804 DSCR10P59022 87 aa13.09□□□□□ -0.31
CTF1-201ENST00000279804 ANAPC13Q9BS18 74 aa13.08□□□□□ -0.31
CTF1-201ENST00000279804 Q8N9L7 120 aa13.07□□□□□ -0.32
CTF1-201ENST00000279804 C9orf92A6NGG3 77 aa13.06□□□□□ -0.32
CTF1-201ENST00000279804 ATOX1O00244 68 aa13.05□□□□□ -0.32
CTF1-201ENST00000279804 K7EQZ3 153 aa13.03□□□□□ -0.32
CTF1-201ENST00000279804 A8MWP4 228 aa13.02□□□□□ -0.33
CTF1-201ENST00000279804 A0A1B0GVX0 72 aa12.97□□□□□ -0.33
CTF1-201ENST00000279804 XP32Q5T750 250 aa12.97□□□□□ -0.33
CTF1-201ENST00000279804 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.34
CTF1-201ENST00000279804 NDUFB1O75438 58 aa12.96□□□□□ -0.34
CTF1-201ENST00000279804 PRR15Q8IV56 129 aa12.96□□□□□ -0.34
CTF1-201ENST00000279804 NOTCH2NLQ7Z3S9 236 aa12.95□□□□□ -0.34
CTF1-201ENST00000279804 SMIM20Q8N5G0 67 aa12.92□□□□□ -0.34
CTF1-201ENST00000279804 HCG22E2RYF7 251 aa12.88□□□□□ -0.35
CTF1-201ENST00000279804 RNF213Q63HN8 5207 aa12.87□□□□□ -0.35
CTF1-201ENST00000279804 SERP2Q8N6R1 65 aa12.87□□□□□ -0.35
CTF1-201ENST00000279804 C8orf17Q9NRJ1 99 aa12.86□□□□□ -0.35
CTF1-201ENST00000279804 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
CTF1-201ENST00000279804 COX7CP15954 63 aa12.84□□□□□ -0.35
CTF1-201ENST00000279804 LINC00313P59037 77 aa12.84□□□□□ -0.35
CTF1-201ENST00000279804 C8orf87E5RJ46 101 aa12.83□□□□□ -0.35
CTF1-201ENST00000279804 MUC17Q685J3 4493 aa12.83□□□□□ -0.36
CTF1-201ENST00000279804 UQCRQO14949 82 aa12.82□□□□□ -0.36
CTF1-201ENST00000279804 TRAV7A0A075B6U4 112 aa12.81□□□□□ -0.36
CTF1-201ENST00000279804 KRTAP16-1A8MUX0 517 aa12.8□□□□□ -0.36
CTF1-201ENST00000279804 WFDC13Q8IUB5 93 aa12.8□□□□□ -0.36
CTF1-201ENST00000279804 CASC2Q6XLA1 102 aa12.78□□□□□ -0.36
CTF1-201ENST00000279804 CCDC179H3BU77 68 aa12.75□□□□□ -0.37
CTF1-201ENST00000279804 SEC61BP60468 96 aaKnown RBP12.75□□□□□ -0.37
CTF1-201ENST00000279804 hDV103S1A0JD37 113 aa12.73□□□□□ -0.37
CTF1-201ENST00000279804 MUC2Q02817 5179 aa12.72□□□□□ -0.37
CTF1-201ENST00000279804 RPL37P61927 97 aaKnown RBP12.72□□□□□ -0.37
CTF1-201ENST00000279804 OCR1Q9BZK8 76 aa12.71□□□□□ -0.37
CTF1-201ENST00000279804 PCOTHQ58A44 107 aa12.7□□□□□ -0.38
CTF1-201ENST00000279804 TMEM254Q8TBM7 123 aa12.69□□□□□ -0.38
CTF1-201ENST00000279804 C20orf166-AS1Q96NR2 134 aa12.67□□□□□ -0.38
CTF1-201ENST00000279804 MRPL34Q9BQ48 92 aaKnown RBP12.67□□□□□ -0.38
CTF1-201ENST00000279804 KRTAP4-1Q9BYQ7 146 aa12.65□□□□□ -0.38
CTF1-201ENST00000279804 Q75L30 129 aa12.64□□□□□ -0.39
CTF1-201ENST00000279804 A8MUU9 505 aa12.64□□□□□ -0.39
CTF1-201ENST00000279804 Q8N9P0 234 aaPredicted RBP12.64□□□□□ -0.39
CTF1-201ENST00000279804 C20orf197Q8N268 126 aa12.57□□□□□ -0.4
CTF1-201ENST00000279804 C5orf47Q569G3 176 aa12.55□□□□□ -0.4
CTF1-201ENST00000279804 NDUFS5O43920 106 aa12.54□□□□□ -0.4
CTF1-201ENST00000279804 ATP11AUNQ6ZP68 121 aa12.54□□□□□ -0.4
CTF1-201ENST00000279804 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
CTF1-201ENST00000279804 TP53AIP1Q9HCN2 124 aa12.54□□□□□ -0.4
CTF1-201ENST00000279804 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
CTF1-201ENST00000279804 NDUFC1O43677 76 aa12.45□□□□□ -0.42
CTF1-201ENST00000279804 MP68P56378 58 aa12.45□□□□□ -0.42
CTF1-201ENST00000279804 TRAV22A0A0B4J277 110 aa12.43□□□□□ -0.42
CTF1-201ENST00000279804 ZCCHC13Q8WW36 166 aaKnown RBP12.43□□□□□ -0.42
CTF1-201ENST00000279804 SNURFQ9Y675 71 aa12.43□□□□□ -0.42
CTF1-201ENST00000279804 H3BPC8 53 aa12.42□□□□□ -0.42
CTF1-201ENST00000279804 Q5W150 140 aa12.42□□□□□ -0.42
CTF1-201ENST00000279804 H0Y9P7 68 aa12.4□□□□□ -0.42
CTF1-201ENST00000279804 CYSTM1Q9H1C7 97 aa12.4□□□□□ -0.42
CTF1-201ENST00000279804 TMEM258P61165 79 aa12.35□□□□□ -0.43
CTF1-201ENST00000279804 H7BZZ5 65 aa12.34□□□□□ -0.43
CTF1-201ENST00000279804 LINC00208Q96KT6 92 aa12.31□□□□□ -0.44
CTF1-201ENST00000279804 FAT4Q6V0I7 4981 aa12.3□□□□□ -0.44
CTF1-201ENST00000279804 C1orf64Q8NEQ6 169 aa12.26□□□□□ -0.45
CTF1-201ENST00000279804 KRTAP19-2Q3LHN2 52 aa12.24□□□□□ -0.45
CTF1-201ENST00000279804 LOC101927531A0A1B0GV80 90 aa12.2□□□□□ -0.46
CTF1-201ENST00000279804 ATP5EP56381 51 aaPredicted RBP12.19□□□□□ -0.46
CTF1-201ENST00000279804 FAM236DA0A1B0GTK5 79 aa12.18□□□□□ -0.46
CTF1-201ENST00000279804 FAM236CP0DP71 79 aa12.18□□□□□ -0.46
CTF1-201ENST00000279804 LCE2CQ5TA81 110 aa12.17□□□□□ -0.46
CTF1-201ENST00000279804 IGKV2D-30A0A075B6S6 120 aa12.16□□□□□ -0.46
CTF1-201ENST00000279804 IGKV2-30P06310 120 aa12.16□□□□□ -0.46
CTF1-201ENST00000279804 SPINK7P58062 85 aa12.16□□□□□ -0.46
CTF1-201ENST00000279804 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
CTF1-201ENST00000279804 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
CTF1-201ENST00000279804 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
CTF1-201ENST00000279804 HRES1P13985 223 aa12.08□□□□□ -0.48
CTF1-201ENST00000279804 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
CTF1-201ENST00000279804 SPANXA2-OT1Q8N9U9 137 aa12.07□□□□□ -0.48
CTF1-201ENST00000279804 RPS28P62857 69 aaKnown RBP12.03□□□□□ -0.48
CTF1-201ENST00000279804 MPLKIPQ8TAP9 179 aa12□□□□□ -0.49
CTF1-201ENST00000279804 MT1HP80294 61 aa11.98□□□□□ -0.49
CTF1-201ENST00000279804 SERP1Q9Y6X1 66 aa11.97□□□□□ -0.49
CTF1-201ENST00000279804 RBM12B-AS1Q9P1G2 102 aa11.94□□□□□ -0.5
CTF1-201ENST00000279804 FLGP20930 4061 aaPredicted RBP11.92□□□□□ -0.5
CTF1-201ENST00000279804 C4orf26Q17RF5 130 aa11.88□□□□□ -0.51
CTF1-201ENST00000279804 M0R2T5 61 aa11.8□□□□□ -0.52
CTF1-201ENST00000279804 KRTAP3-1Q9BYR8 98 aa11.76□□□□□ -0.53
CTF1-201ENST00000279804 DMAC1Q96GE9 116 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms