RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PRR4Q16378 134 aa14.81□□□□□ -0.04
ROM1-201ENST00000278833 MRPL34Q9BQ48 92 aaKnown RBP14.8□□□□□ -0.04
ROM1-201ENST00000278833 ANAPC11Q9NYG5 84 aa14.8□□□□□ -0.04
ROM1-201ENST00000278833 IGHV6-1A0A0B4J1U7 121 aa14.78□□□□□ -0.04
ROM1-201ENST00000278833 SSBP3-AS1Q7Z2R9 100 aa14.78□□□□□ -0.04
ROM1-201ENST00000278833 IGLV7-46A0A075B6I9 117 aa14.78□□□□□ -0.04
ROM1-201ENST00000278833 PKD1P98161 4303 aa14.77□□□□□ -0.05
ROM1-201ENST00000278833 V9GYY9 64 aa14.76□□□□□ -0.05
ROM1-201ENST00000278833 DNAH11Q96DT5 4516 aa14.72□□□□□ -0.05
ROM1-201ENST00000278833 EPPK1P58107 5090 aaKnown RBP14.72□□□□□ -0.05
ROM1-201ENST00000278833 PKHD1P08F94 4074 aa14.72□□□□□ -0.05
ROM1-201ENST00000278833 A0A1B0GVY2 172 aa14.69□□□□□ -0.06
ROM1-201ENST00000278833 Q6ZSA8 131 aa14.69□□□□□ -0.06
ROM1-201ENST00000278833 CIRBP-AS1Q8TBR5 109 aa14.69□□□□□ -0.06
ROM1-201ENST00000278833 C1orf195Q5TG92 126 aa14.69□□□□□ -0.06
ROM1-201ENST00000278833 C8orf87E5RJ46 101 aa14.66□□□□□ -0.06
ROM1-201ENST00000278833 KRTAP10-2P60368 255 aa14.66□□□□□ -0.06
ROM1-201ENST00000278833 A0A087X002 238 aa14.64□□□□□ -0.07
ROM1-201ENST00000278833 NOTCH2NLQ7Z3S9 236 aa14.64□□□□□ -0.07
ROM1-201ENST00000278833 DNAH5Q8TE73 4624 aa14.64□□□□□ -0.07
ROM1-201ENST00000278833 NDUFS5O43920 106 aa14.63□□□□□ -0.07
ROM1-201ENST00000278833 BRK1Q8WUW1 75 aa14.63□□□□□ -0.07
ROM1-201ENST00000278833 KRTAP13-3Q3SY46 172 aa14.6□□□□□ -0.07
ROM1-201ENST00000278833 LOC101927531A0A1B0GV80 90 aa14.59□□□□□ -0.07
ROM1-201ENST00000278833 COA5Q86WW8 74 aa14.58□□□□□ -0.08
ROM1-201ENST00000278833 LIMD2Q9BT23 127 aa14.57□□□□□ -0.08
ROM1-201ENST00000278833 PCOTHQ58A44 107 aa14.56□□□□□ -0.08
ROM1-201ENST00000278833 Q8N9P0 234 aaPredicted RBP14.56□□□□□ -0.08
ROM1-201ENST00000278833 SPINK6Q6UWN8 80 aa14.54□□□□□ -0.08
ROM1-201ENST00000278833 KRTAP10-1P60331 282 aa14.51□□□□□ -0.09
ROM1-201ENST00000278833 KRTAP13-2Q52LG2 175 aa14.5□□□□□ -0.09
ROM1-201ENST00000278833 DYNC1H1Q14204 4646 aaKnown RBP14.49□□□□□ -0.09
ROM1-201ENST00000278833 PSPHP1O15172 72 aa14.48□□□□□ -0.09
ROM1-201ENST00000278833 LRP1BQ9NZR2 4599 aa14.48□□□□□ -0.09
ROM1-201ENST00000278833 A8MUN3 132 aa14.46□□□□□ -0.1
ROM1-201ENST00000278833 Q5VV11 94 aa14.46□□□□□ -0.1
ROM1-201ENST00000278833 Q5W150 140 aa14.44□□□□□ -0.1
ROM1-201ENST00000278833 KRTAP1-4P0C5Y4 121 aa14.42□□□□□ -0.1
ROM1-201ENST00000278833 LINC00313P59037 77 aa14.4□□□□□ -0.1
ROM1-201ENST00000278833 BIRC6Q9NR09 4857 aa14.38□□□□□ -0.11
ROM1-201ENST00000278833 FAM229AH3BQW9 127 aa14.37□□□□□ -0.11
ROM1-201ENST00000278833 HRES1P13985 223 aa14.36□□□□□ -0.11
ROM1-201ENST00000278833 Q75L30 129 aa14.35□□□□□ -0.11
ROM1-201ENST00000278833 LINC01558Q9Y6Z2 57 aa14.33□□□□□ -0.11
ROM1-201ENST00000278833 KRTAP16-1A8MUX0 517 aa14.31□□□□□ -0.12
ROM1-201ENST00000278833 PRR15LQ9BU68 103 aa14.31□□□□□ -0.12
ROM1-201ENST00000278833 APOBP04114 4563 aaKnown RBP14.3□□□□□ -0.12
ROM1-201ENST00000278833 KIAA1109Q2LD37 5005 aa14.29□□□□□ -0.12
ROM1-201ENST00000278833 IGKV2-30P06310 120 aa14.23□□□□□ -0.13
ROM1-201ENST00000278833 CHKB-CPT1BH3BT56 60 aa14.23□□□□□ -0.13
ROM1-201ENST00000278833 DMAC1Q96GE9 116 aa14.22□□□□□ -0.13
ROM1-201ENST00000278833 HSPG2P98160 4391 aa14.21□□□□□ -0.13
ROM1-201ENST00000278833 SPINK1P00995 79 aa14.21□□□□□ -0.14
ROM1-201ENST00000278833 ACYP2P14621 99 aa14.2□□□□□ -0.14
ROM1-201ENST00000278833 RPS29P62273 56 aaKnown RBP14.19□□□□□ -0.14
ROM1-201ENST00000278833 RYR1P21817 5038 aa14.18□□□□□ -0.14
ROM1-201ENST00000278833 PLA2G1BP04054 148 aaKnown RBP14.15□□□□□ -0.14
ROM1-201ENST00000278833 C4orf48Q5BLP8 95 aa14.15□□□□□ -0.14
ROM1-201ENST00000278833 TYMSOSQ8TAI1 123 aa14.15□□□□□ -0.14
ROM1-201ENST00000278833 SPAG11AQ6PDA7 123 aa14.14□□□□□ -0.15
ROM1-201ENST00000278833 VPS13BQ7Z7G8 4022 aa14.14□□□□□ -0.15
ROM1-201ENST00000278833 PRR26Q8N8Z3 221 aa14.1□□□□□ -0.15
ROM1-201ENST00000278833 FAT1Q14517 4588 aa14.06□□□□□ -0.16
ROM1-201ENST00000278833 SMR3BP02814 79 aaPredicted RBP14.05□□□□□ -0.16
ROM1-201ENST00000278833 KRTAP17-1Q9BYP8 105 aa14.05□□□□□ -0.16
ROM1-201ENST00000278833 A6NED7 52 aa14.04□□□□□ -0.16
ROM1-201ENST00000278833 HERC2O95714 4834 aa14.03□□□□□ -0.16
ROM1-201ENST00000278833 CDC42SE1Q9NRR8 79 aa14.03□□□□□ -0.16
ROM1-201ENST00000278833 LCA10Q71F78 164 aa14.01□□□□□ -0.17
ROM1-201ENST00000278833 LINC00304Q8N9R0 145 aa14□□□□□ -0.17
ROM1-201ENST00000278833 A8MU10 97 aa13.99□□□□□ -0.17
ROM1-201ENST00000278833 RETNLBQ9BQ08 111 aa13.99□□□□□ -0.17
ROM1-201ENST00000278833 ATP11AUNQ6ZP68 121 aa13.97□□□□□ -0.17
ROM1-201ENST00000278833 Q8N1X5 172 aa13.96□□□□□ -0.17
ROM1-201ENST00000278833 IGKV2D-30A0A075B6S6 120 aa13.89□□□□□ -0.19
ROM1-201ENST00000278833 Q5VSD8 79 aa13.89□□□□□ -0.19
ROM1-201ENST00000278833 KRTAP4-5Q9BYR2 181 aa13.89□□□□□ -0.19
ROM1-201ENST00000278833 PMAIP1Q13794 54 aa13.88□□□□□ -0.19
ROM1-201ENST00000278833 SEC61GP60059 68 aa13.87□□□□□ -0.19
ROM1-201ENST00000278833 SPINK7P58062 85 aa13.86□□□□□ -0.19
ROM1-201ENST00000278833 PKHD1L1Q86WI1 4243 aa13.85□□□□□ -0.19
ROM1-201ENST00000278833 KRTAP10-4P60372 401 aaPredicted RBP13.84□□□□□ -0.19
ROM1-201ENST00000278833 C7orf65Q6ZTY9 151 aa13.82□□□□□ -0.2
ROM1-201ENST00000278833 ABCA13Q86UQ4 5058 aa13.75□□□□□ -0.21
ROM1-201ENST00000278833 C20orf166-AS1Q96NR2 134 aa13.75□□□□□ -0.21
ROM1-201ENST00000278833 A6NN06 94 aa13.74□□□□□ -0.21
ROM1-201ENST00000278833 A8MUU9 505 aa13.74□□□□□ -0.21
ROM1-201ENST00000278833 SPTSSBQ8NFR3 76 aa13.74□□□□□ -0.21
ROM1-201ENST00000278833 A0A1B0GU69 56 aa13.72□□□□□ -0.21
ROM1-201ENST00000278833 PCLOQ9Y6V0 5065 aa13.67□□□□□ -0.22
ROM1-201ENST00000278833 FLG2Q5D862 2391 aaPredicted RBP13.66□□□□□ -0.22
ROM1-201ENST00000278833 KTN1-AS1Q86SY8 53 aa13.65□□□□□ -0.22
ROM1-201ENST00000278833 MYCBP2O75592 4640 aa13.61□□□□□ -0.23
ROM1-201ENST00000278833 SPATA8Q6RVD6 105 aa13.59□□□□□ -0.23
ROM1-201ENST00000278833 LRP1Q07954 4544 aaKnown RBP13.52□□□□□ -0.25
ROM1-201ENST00000278833 C9orf92A6NGG3 77 aa13.5□□□□□ -0.25
ROM1-201ENST00000278833 UQCR11O14957 56 aa13.5□□□□□ -0.25
ROM1-201ENST00000278833 FAT3Q8TDW7 4589 aa13.43□□□□□ -0.26
ROM1-201ENST00000278833 MIR22HGQ0VDD5 57 aa13.43□□□□□ -0.26
ROM1-201ENST00000278833 KRTAP3-1Q9BYR8 98 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms