RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 A0A1B0GVY2 172 aa11.74□□□□□ -0.53
UBE2F-201ENST00000272930 SPINK6Q6UWN8 80 aa11.73□□□□□ -0.53
UBE2F-201ENST00000272930 LINC00208Q96KT6 92 aa11.73□□□□□ -0.53
UBE2F-201ENST00000272930 Q5XG85 94 aa11.72□□□□□ -0.53
UBE2F-201ENST00000272930 TP53AIP1Q9HCN2 124 aa11.72□□□□□ -0.53
UBE2F-201ENST00000272930 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.53
UBE2F-201ENST00000272930 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
UBE2F-201ENST00000272930 RYR2Q92736 4967 aa11.7□□□□□ -0.54
UBE2F-201ENST00000272930 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
UBE2F-201ENST00000272930 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
UBE2F-201ENST00000272930 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
UBE2F-201ENST00000272930 C1orf64Q8NEQ6 169 aa11.64□□□□□ -0.55
UBE2F-201ENST00000272930 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
UBE2F-201ENST00000272930 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
UBE2F-201ENST00000272930 NDUFS5O43920 106 aa11.62□□□□□ -0.55
UBE2F-201ENST00000272930 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
UBE2F-201ENST00000272930 CYP4F30PQ9H0H9 118 aa11.6□□□□□ -0.55
UBE2F-201ENST00000272930 TYMSOSQ8TAI1 123 aa11.59□□□□□ -0.55
UBE2F-201ENST00000272930 SMIM26A0A096LP01 95 aa11.57□□□□□ -0.56
UBE2F-201ENST00000272930 SPANXA2-OT1Q8N9U9 137 aa11.57□□□□□ -0.56
UBE2F-201ENST00000272930 KMT2CQ8NEZ4 4911 aaKnown RBP11.56□□□□□ -0.56
UBE2F-201ENST00000272930 SMR3BP02814 79 aaPredicted RBP11.56□□□□□ -0.56
UBE2F-201ENST00000272930 FAT1Q14517 4588 aa11.54□□□□□ -0.56
UBE2F-201ENST00000272930 SPINK1P00995 79 aa11.53□□□□□ -0.56
UBE2F-201ENST00000272930 C4orf48Q5BLP8 95 aa11.53□□□□□ -0.56
UBE2F-201ENST00000272930 LINC00313P59037 77 aa11.52□□□□□ -0.56
UBE2F-201ENST00000272930 KRTAP10-4P60372 401 aaPredicted RBP11.52□□□□□ -0.56
UBE2F-201ENST00000272930 PRR4Q16378 134 aa11.51□□□□□ -0.57
UBE2F-201ENST00000272930 FP248Q71RG6 208 aaPredicted RBP11.51□□□□□ -0.57
UBE2F-201ENST00000272930 PRR26Q8N8Z3 221 aa11.5□□□□□ -0.57
UBE2F-201ENST00000272930 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
UBE2F-201ENST00000272930 RPS29P62273 56 aaKnown RBP11.46□□□□□ -0.57
UBE2F-201ENST00000272930 Q5W150 140 aa11.46□□□□□ -0.57
UBE2F-201ENST00000272930 Q8N9P0 234 aaPredicted RBP11.46□□□□□ -0.57
UBE2F-201ENST00000272930 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
UBE2F-201ENST00000272930 C4orf26Q17RF5 130 aa11.45□□□□□ -0.58
UBE2F-201ENST00000272930 LINC00304Q8N9R0 145 aa11.45□□□□□ -0.58
UBE2F-201ENST00000272930 KRTAP16-1A8MUX0 517 aa11.43□□□□□ -0.58
UBE2F-201ENST00000272930 SPAG11AQ6PDA7 123 aa11.43□□□□□ -0.58
UBE2F-201ENST00000272930 IGLV7-46A0A075B6I9 117 aa11.43□□□□□ -0.58
UBE2F-201ENST00000272930 PCOTHQ58A44 107 aa11.42□□□□□ -0.58
UBE2F-201ENST00000272930 LOC101927531A0A1B0GV80 90 aa11.41□□□□□ -0.58
UBE2F-201ENST00000272930 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
UBE2F-201ENST00000272930 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
UBE2F-201ENST00000272930 RYR3Q15413 4870 aa11.25□□□□□ -0.61
UBE2F-201ENST00000272930 Q1T7F1 81 aa11.25□□□□□ -0.61
UBE2F-201ENST00000272930 HSPG2P98160 4391 aa11.24□□□□□ -0.61
UBE2F-201ENST00000272930 COA5Q86WW8 74 aa11.24□□□□□ -0.61
UBE2F-201ENST00000272930 RETNLBQ9BQ08 111 aa11.23□□□□□ -0.61
UBE2F-201ENST00000272930 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
UBE2F-201ENST00000272930 HRES1P13985 223 aa11.16□□□□□ -0.62
UBE2F-201ENST00000272930 V9GYY9 64 aa11.13□□□□□ -0.63
UBE2F-201ENST00000272930 TNXBP22105 4242 aa11.13□□□□□ -0.63
UBE2F-201ENST00000272930 RYR1P21817 5038 aa11.13□□□□□ -0.63
UBE2F-201ENST00000272930 Q5VSD8 79 aa11.13□□□□□ -0.63
UBE2F-201ENST00000272930 FLG2Q5D862 2391 aaPredicted RBP11.11□□□□□ -0.63
UBE2F-201ENST00000272930 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
UBE2F-201ENST00000272930 DMAC1Q96GE9 116 aa11.08□□□□□ -0.64
UBE2F-201ENST00000272930 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
UBE2F-201ENST00000272930 IGKV2D-30A0A075B6S6 120 aa11.07□□□□□ -0.64
UBE2F-201ENST00000272930 KRTAP10-8P60410 259 aa11.07□□□□□ -0.64
UBE2F-201ENST00000272930 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
UBE2F-201ENST00000272930 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
UBE2F-201ENST00000272930 A8MUU9 505 aa11.05□□□□□ -0.64
UBE2F-201ENST00000272930 ACYP2P14621 99 aa11.05□□□□□ -0.64
UBE2F-201ENST00000272930 Q8N1X5 172 aa11.05□□□□□ -0.64
UBE2F-201ENST00000272930 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
UBE2F-201ENST00000272930 PSPHP1O15172 72 aa11.02□□□□□ -0.64
UBE2F-201ENST00000272930 A8MUN3 132 aa10.99□□□□□ -0.65
UBE2F-201ENST00000272930 C7orf65Q6ZTY9 151 aa10.99□□□□□ -0.65
UBE2F-201ENST00000272930 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
UBE2F-201ENST00000272930 KIAA1109Q2LD37 5005 aa10.95□□□□□ -0.66
UBE2F-201ENST00000272930 Q5VV11 94 aa10.94□□□□□ -0.66
UBE2F-201ENST00000272930 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
UBE2F-201ENST00000272930 BRK1Q8WUW1 75 aa10.91□□□□□ -0.66
UBE2F-201ENST00000272930 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
UBE2F-201ENST00000272930 PRO0628Q9UI54 55 aa10.91□□□□□ -0.66
UBE2F-201ENST00000272930 Q75L30 129 aa10.88□□□□□ -0.67
UBE2F-201ENST00000272930 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
UBE2F-201ENST00000272930 EPPK1P58107 5090 aaKnown RBP10.84□□□□□ -0.67
UBE2F-201ENST00000272930 DMBT1Q9UGM3 2413 aaPredicted RBP10.82□□□□□ -0.68
UBE2F-201ENST00000272930 MT1HL1P0DM35 61 aa10.8□□□□□ -0.68
UBE2F-201ENST00000272930 MYCBP2O75592 4640 aa10.77□□□□□ -0.69
UBE2F-201ENST00000272930 SPINK7P58062 85 aa10.75□□□□□ -0.69
UBE2F-201ENST00000272930 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
UBE2F-201ENST00000272930 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
UBE2F-201ENST00000272930 A6NED7 52 aa10.66□□□□□ -0.7
UBE2F-201ENST00000272930 XP32Q5T750 250 aa10.66□□□□□ -0.7
UBE2F-201ENST00000272930 KRTAP3-1Q9BYR8 98 aa10.65□□□□□ -0.7
UBE2F-201ENST00000272930 A8MU10 97 aa10.62□□□□□ -0.71
UBE2F-201ENST00000272930 A0A1B0GU69 56 aa10.6□□□□□ -0.71
UBE2F-201ENST00000272930 LCA10Q71F78 164 aa10.6□□□□□ -0.71
UBE2F-201ENST00000272930 COX6B2Q6YFQ2 88 aa10.57□□□□□ -0.72
UBE2F-201ENST00000272930 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
UBE2F-201ENST00000272930 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
UBE2F-201ENST00000272930 SPTSSBQ8NFR3 76 aa10.52□□□□□ -0.73
UBE2F-201ENST00000272930 TPRXLQ17RH7 258 aa10.47□□□□□ -0.73
UBE2F-201ENST00000272930 ABCA13Q86UQ4 5058 aa10.38□□□□□ -0.75
UBE2F-201ENST00000272930 SEC61GP60059 68 aa10.37□□□□□ -0.75
UBE2F-201ENST00000272930 UQCR11O14957 56 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms