RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
CDH11-201ENST00000268603 NOTCH1P46531 2555 aa7.21□□□□□ -1.25
CDH11-201ENST00000268603 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
CDH11-201ENST00000268603 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.26
CDH11-201ENST00000268603 ASPMQ8IZT6 3477 aa7.18□□□□□ -1.26
CDH11-201ENST00000268603 TNRC18O15417 2968 aaPredicted RBP7.18□□□□□ -1.26
CDH11-201ENST00000268603 DCHS1Q96JQ0 3298 aa7.17□□□□□ -1.26
CDH11-201ENST00000268603 A6NN06 94 aa7.15□□□□□ -1.26
CDH11-201ENST00000268603 P0C880 135 aa7.15□□□□□ -1.26
CDH11-201ENST00000268603 A0A1B0GVY2 172 aa7.15□□□□□ -1.27
CDH11-201ENST00000268603 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
CDH11-201ENST00000268603 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
CDH11-201ENST00000268603 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
CDH11-201ENST00000268603 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
CDH11-201ENST00000268603 STAB1Q9NY15 2570 aa7.1□□□□□ -1.27
CDH11-201ENST00000268603 KRTAP29-1A8MX34 341 aaPredicted RBP7.09□□□□□ -1.27
CDH11-201ENST00000268603 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
CDH11-201ENST00000268603 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
CDH11-201ENST00000268603 RELNP78509 3460 aa7.08□□□□□ -1.28
CDH11-201ENST00000268603 ZANQ9Y493 2812 aa7.07□□□□□ -1.28
CDH11-201ENST00000268603 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
CDH11-201ENST00000268603 LAMA5O15230 3695 aa7.04□□□□□ -1.28
CDH11-201ENST00000268603 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
CDH11-201ENST00000268603 DMDP11532 3685 aa7.01□□□□□ -1.29
CDH11-201ENST00000268603 MUC3AQ02505 3323 aa6.99□□□□□ -1.29
CDH11-201ENST00000268603 HIVEP1P15822 2718 aa6.98□□□□□ -1.29
CDH11-201ENST00000268603 CRYBG3Q68DQ2 2970 aa6.98□□□□□ -1.29
CDH11-201ENST00000268603 HRNRQ86YZ3 2850 aaPredicted RBP6.98□□□□□ -1.29
CDH11-201ENST00000268603 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
CDH11-201ENST00000268603 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
CDH11-201ENST00000268603 KRTAP10-10P60014 251 aa6.96□□□□□ -1.29
CDH11-201ENST00000268603 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.3
CDH11-201ENST00000268603 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
CDH11-201ENST00000268603 ITPR2Q14571 2701 aa6.96□□□□□ -1.3
CDH11-201ENST00000268603 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
CDH11-201ENST00000268603 FBN2P35556 2912 aa6.95□□□□□ -1.3
CDH11-201ENST00000268603 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
CDH11-201ENST00000268603 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
CDH11-201ENST00000268603 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
CDH11-201ENST00000268603 APCP25054 2843 aa6.92□□□□□ -1.3
CDH11-201ENST00000268603 Q6ZRN7 208 aaPredicted RBP6.9□□□□□ -1.3
CDH11-201ENST00000268603 NF1P21359 2839 aa6.89□□□□□ -1.31
CDH11-201ENST00000268603 DCHS2Q6V1P9 2916 aa6.89□□□□□ -1.31
CDH11-201ENST00000268603 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
CDH11-201ENST00000268603 SMG1Q96Q15 3661 aaKnown RBP6.86□□□□□ -1.31
CDH11-201ENST00000268603 SVEP1Q4LDE5 3571 aa6.76□□□□□ -1.33
CDH11-201ENST00000268603 NIPBLQ6KC79 2804 aaeCLIP6.75□□□□□ -1.33
CDH11-201ENST00000268603 XP32Q5T750 250 aa6.72□□□□□ -1.33
CDH11-201ENST00000268603 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
CDH11-201ENST00000268603 CUBNO60494 3623 aa6.72□□□□□ -1.33
CDH11-201ENST00000268603 KMT2BQ9UMN6 2715 aaPredicted RBP6.72□□□□□ -1.33
CDH11-201ENST00000268603 MXRA5Q9NR99 2828 aa6.71□□□□□ -1.34
CDH11-201ENST00000268603 CELSR1Q9NYQ6 3014 aa6.7□□□□□ -1.34
CDH11-201ENST00000268603 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
CDH11-201ENST00000268603 H0YAA0 97 aa6.59□□□□□ -1.35
CDH11-201ENST00000268603 TENM4Q6N022 2769 aa6.57□□□□□ -1.36
CDH11-201ENST00000268603 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
CDH11-201ENST00000268603 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
CDH11-201ENST00000268603 KRTAP21-3Q3LHN1 58 aa6.52□□□□□ -1.37
CDH11-201ENST00000268603 NBPF19A0A087WUL8 3843 aa6.48□□□□□ -1.37
CDH11-201ENST00000268603 TENM3Q9P273 2699 aa6.45□□□□□ -1.38
CDH11-201ENST00000268603 CSMD2Q7Z408 3487 aa6.44□□□□□ -1.38
CDH11-201ENST00000268603 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
CDH11-201ENST00000268603 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
CDH11-201ENST00000268603 TENM1Q9UKZ4 2725 aa6.38□□□□□ -1.39
CDH11-201ENST00000268603 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
CDH11-201ENST00000268603 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
CDH11-201ENST00000268603 VWFP04275 2813 aa6.34□□□□□ -1.39
CDH11-201ENST00000268603 PDZD2O15018 2839 aa6.33□□□□□ -1.4
CDH11-201ENST00000268603 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
CDH11-201ENST00000268603 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
CDH11-201ENST00000268603 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
CDH11-201ENST00000268603 PKD1L1Q8TDX9 2849 aa6.31□□□□□ -1.4
CDH11-201ENST00000268603 BSNQ9UPA5 3926 aa6.29□□□□□ -1.4
CDH11-201ENST00000268603 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
CDH11-201ENST00000268603 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
CDH11-201ENST00000268603 TENM2Q9NT68 2774 aa6.22□□□□□ -1.41
CDH11-201ENST00000268603 TGP01266 2768 aa6.18□□□□□ -1.42
CDH11-201ENST00000268603 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
CDH11-201ENST00000268603 VPS13CQ709C8 3753 aa6.1□□□□□ -1.43
CDH11-201ENST00000268603 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
CDH11-201ENST00000268603 ANK3Q12955 4377 aaKnown RBP6.02□□□□□ -1.45
CDH11-201ENST00000268603 INE1O15225 51 aa6.01□□□□□ -1.45
CDH11-201ENST00000268603 FBN3Q75N90 2809 aa5.97□□□□□ -1.45
CDH11-201ENST00000268603 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
CDH11-201ENST00000268603 ZNF469Q96JG9 3925 aaPredicted RBP5.86□□□□□ -1.47
CDH11-201ENST00000268603 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
CDH11-201ENST00000268603 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
CDH11-201ENST00000268603 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
CDH11-201ENST00000268603 COL7A1Q02388 2944 aa5.79□□□□□ -1.48
CDH11-201ENST00000268603 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
CDH11-201ENST00000268603 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CDH11-201ENST00000268603 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
CDH11-201ENST00000268603 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
CDH11-201ENST00000268603 HUWE1Q7Z6Z7 4374 aaKnown RBP5.63□□□□□ -1.51
CDH11-201ENST00000268603 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
CDH11-201ENST00000268603 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
CDH11-201ENST00000268603 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CDH11-201ENST00000268603 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
CDH11-201ENST00000268603 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms