RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
CDR2-201ENST00000268383 CHKB-CPT1BH3BT56 60 aa13.17□□□□□ -0.3
CDR2-201ENST00000268383 CDK2AP2O75956 126 aa13.15□□□□□ -0.3
CDR2-201ENST00000268383 ZNF861PO60384 105 aa13.14□□□□□ -0.31
CDR2-201ENST00000268383 TP53AIP1Q9HCN2 124 aa13.12□□□□□ -0.31
CDR2-201ENST00000268383 ZNF706Q9Y5V0 76 aaPredicted RBP13.12□□□□□ -0.31
CDR2-201ENST00000268383 Q6ZR54 194 aa13.12□□□□□ -0.31
CDR2-201ENST00000268383 MRPL34Q9BQ48 92 aaKnown RBP13.12□□□□□ -0.31
CDR2-201ENST00000268383 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
CDR2-201ENST00000268383 PMAIP1Q13794 54 aa13.09□□□□□ -0.31
CDR2-201ENST00000268383 PLAC8Q9NZF1 115 aa13.09□□□□□ -0.31
CDR2-201ENST00000268383 CIRBP-AS1Q8TBR5 109 aa13.08□□□□□ -0.32
CDR2-201ENST00000268383 LIMD2Q9BT23 127 aa13.07□□□□□ -0.32
CDR2-201ENST00000268383 DNAH11Q96DT5 4516 aa13.07□□□□□ -0.32
CDR2-201ENST00000268383 SPAG11AQ6PDA7 123 aa13.06□□□□□ -0.32
CDR2-201ENST00000268383 Q5W150 140 aa13.05□□□□□ -0.32
CDR2-201ENST00000268383 SPTSSBQ8NFR3 76 aa13.02□□□□□ -0.32
CDR2-201ENST00000268383 HRES1P13985 223 aa13□□□□□ -0.33
CDR2-201ENST00000268383 SEC61GP60059 68 aa12.99□□□□□ -0.33
CDR2-201ENST00000268383 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
CDR2-201ENST00000268383 IGLV7-43P04211 117 aa12.98□□□□□ -0.33
CDR2-201ENST00000268383 A6NED7 52 aa12.98□□□□□ -0.33
CDR2-201ENST00000268383 LCA10Q71F78 164 aa12.97□□□□□ -0.33
CDR2-201ENST00000268383 DNHD1Q96M86 4753 aa12.94□□□□□ -0.34
CDR2-201ENST00000268383 RETNLBQ9BQ08 111 aa12.94□□□□□ -0.34
CDR2-201ENST00000268383 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
CDR2-201ENST00000268383 Q75L30 129 aa12.92□□□□□ -0.34
CDR2-201ENST00000268383 LOC101927531A0A1B0GV80 90 aa12.91□□□□□ -0.34
CDR2-201ENST00000268383 LY6G6CO95867 125 aa12.9□□□□□ -0.35
CDR2-201ENST00000268383 PRR26Q8N8Z3 221 aa12.9□□□□□ -0.35
CDR2-201ENST00000268383 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
CDR2-201ENST00000268383 KRTAP13-3Q3SY46 172 aa12.88□□□□□ -0.35
CDR2-201ENST00000268383 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
CDR2-201ENST00000268383 LINC01558Q9Y6Z2 57 aa12.84□□□□□ -0.35
CDR2-201ENST00000268383 SPINK7P58062 85 aa12.82□□□□□ -0.36
CDR2-201ENST00000268383 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
CDR2-201ENST00000268383 KRTAP13-2Q52LG2 175 aa12.77□□□□□ -0.37
CDR2-201ENST00000268383 LINC00313P59037 77 aa12.75□□□□□ -0.37
CDR2-201ENST00000268383 ATP11AUNQ6ZP68 121 aa12.75□□□□□ -0.37
CDR2-201ENST00000268383 SSBP3-AS1Q7Z2R9 100 aa12.75□□□□□ -0.37
CDR2-201ENST00000268383 VPS13BQ7Z7G8 4022 aa12.74□□□□□ -0.37
CDR2-201ENST00000268383 CDC42SE1Q9NRR8 79 aa12.73□□□□□ -0.37
CDR2-201ENST00000268383 PKD1P98161 4303 aa12.71□□□□□ -0.37
CDR2-201ENST00000268383 C8orf87E5RJ46 101 aa12.68□□□□□ -0.38
CDR2-201ENST00000268383 KTN1-AS1Q86SY8 53 aa12.68□□□□□ -0.38
CDR2-201ENST00000268383 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
CDR2-201ENST00000268383 A6NN06 94 aa12.66□□□□□ -0.38
CDR2-201ENST00000268383 ACYP2P14621 99 aa12.65□□□□□ -0.38
CDR2-201ENST00000268383 FAT2Q9NYQ8 4349 aa12.64□□□□□ -0.39
CDR2-201ENST00000268383 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
CDR2-201ENST00000268383 DMAC1Q96GE9 116 aa12.59□□□□□ -0.39
CDR2-201ENST00000268383 KRTAP16-1A8MUX0 517 aa12.57□□□□□ -0.4
CDR2-201ENST00000268383 IGKV2-30P06310 120 aa12.57□□□□□ -0.4
CDR2-201ENST00000268383 IGKV2D-30A0A075B6S6 120 aa12.56□□□□□ -0.4
CDR2-201ENST00000268383 KRTAP1-4P0C5Y4 121 aa12.55□□□□□ -0.4
CDR2-201ENST00000268383 RBM12B-AS1Q9P1G2 102 aa12.54□□□□□ -0.4
CDR2-201ENST00000268383 PKHD1P08F94 4074 aa12.51□□□□□ -0.41
CDR2-201ENST00000268383 Q6ZSA8 131 aa12.51□□□□□ -0.41
CDR2-201ENST00000268383 KRTAP21-3Q3LHN1 58 aa12.5□□□□□ -0.41
CDR2-201ENST00000268383 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.42
CDR2-201ENST00000268383 A0A1B0GU69 56 aa12.43□□□□□ -0.42
CDR2-201ENST00000268383 C7orf65Q6ZTY9 151 aa12.43□□□□□ -0.42
CDR2-201ENST00000268383 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
CDR2-201ENST00000268383 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
CDR2-201ENST00000268383 SPINK1P00995 79 aa12.32□□□□□ -0.44
CDR2-201ENST00000268383 PRAC1Q96KF2 57 aa12.32□□□□□ -0.44
CDR2-201ENST00000268383 Q8N1X5 172 aa12.32□□□□□ -0.44
CDR2-201ENST00000268383 ADM2Q7Z4H4 148 aa12.3□□□□□ -0.44
CDR2-201ENST00000268383 FAT1Q14517 4588 aa12.25□□□□□ -0.45
CDR2-201ENST00000268383 SMR3BP02814 79 aaPredicted RBP12.24□□□□□ -0.45
CDR2-201ENST00000268383 MIR22HGQ0VDD5 57 aa12.2□□□□□ -0.46
CDR2-201ENST00000268383 SPATA8Q6RVD6 105 aa12.2□□□□□ -0.46
CDR2-201ENST00000268383 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
CDR2-201ENST00000268383 LINC00304Q8N9R0 145 aa12.19□□□□□ -0.46
CDR2-201ENST00000268383 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
CDR2-201ENST00000268383 DYNC1H1Q14204 4646 aaKnown RBP12.19□□□□□ -0.46
CDR2-201ENST00000268383 UQCR11O14957 56 aa12.17□□□□□ -0.46
CDR2-201ENST00000268383 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
CDR2-201ENST00000268383 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
CDR2-201ENST00000268383 KRTAP3-1Q9BYR8 98 aa11.96□□□□□ -0.49
CDR2-201ENST00000268383 RPS29P62273 56 aaKnown RBP11.92□□□□□ -0.5
CDR2-201ENST00000268383 A8MUU9 505 aa11.9□□□□□ -0.5
CDR2-201ENST00000268383 C20orf166-AS1Q96NR2 134 aa11.89□□□□□ -0.51
CDR2-201ENST00000268383 H0YAA0 97 aa11.85□□□□□ -0.51
CDR2-201ENST00000268383 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
CDR2-201ENST00000268383 CSAG1Q6PB30 78 aa11.85□□□□□ -0.51
CDR2-201ENST00000268383 FLG2Q5D862 2391 aaPredicted RBP11.83□□□□□ -0.52
CDR2-201ENST00000268383 LINC01554Q52M75 96 aa11.82□□□□□ -0.52
CDR2-201ENST00000268383 LRP1Q07954 4544 aaKnown RBP11.82□□□□□ -0.52
CDR2-201ENST00000268383 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
CDR2-201ENST00000268383 KMT2CQ8NEZ4 4911 aaKnown RBP11.74□□□□□ -0.53
CDR2-201ENST00000268383 A0A1B0GU33 70 aa11.72□□□□□ -0.53
CDR2-201ENST00000268383 RYR2Q92736 4967 aa11.71□□□□□ -0.54
CDR2-201ENST00000268383 HSPG2P98160 4391 aa11.7□□□□□ -0.54
CDR2-201ENST00000268383 MYCBP2O75592 4640 aa11.7□□□□□ -0.54
CDR2-201ENST00000268383 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
CDR2-201ENST00000268383 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
CDR2-201ENST00000268383 H1FX-AS1Q4G0G2 97 aa11.65□□□□□ -0.54
CDR2-201ENST00000268383 TNXBP22105 4242 aa11.63□□□□□ -0.55
CDR2-201ENST00000268383 COX6B2Q6YFQ2 88 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms