RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LINC00846Q9NV44 126 aa7.78□□□□□ -1.16
SSBP1-201ENST00000265304 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
SSBP1-201ENST00000265304 DEFB116Q30KQ4 102 aa7.77□□□□□ -1.17
SSBP1-201ENST00000265304 Q6ZVQ6 151 aa7.77□□□□□ -1.17
SSBP1-201ENST00000265304 ACYP1P07311 99 aa7.76□□□□□ -1.17
SSBP1-201ENST00000265304 SIGMAR1Q99720 223 aa7.75□□□□□ -1.17
SSBP1-201ENST00000265304 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
SSBP1-201ENST00000265304 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
SSBP1-201ENST00000265304 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
SSBP1-201ENST00000265304 A8MWP4 228 aa7.74□□□□□ -1.17
SSBP1-201ENST00000265304 DSCR10P59022 87 aa7.74□□□□□ -1.17
SSBP1-201ENST00000265304 C9orf92A6NGG3 77 aa7.73□□□□□ -1.17
SSBP1-201ENST00000265304 C8orf87E5RJ46 101 aa7.72□□□□□ -1.17
SSBP1-201ENST00000265304 UBL5Q9BZL1 73 aa7.72□□□□□ -1.17
SSBP1-201ENST00000265304 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.18
SSBP1-201ENST00000265304 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
SSBP1-201ENST00000265304 LINC00313P59037 77 aa7.71□□□□□ -1.18
SSBP1-201ENST00000265304 PRR15Q8IV56 129 aa7.71□□□□□ -1.18
SSBP1-201ENST00000265304 NDUFB1O75438 58 aa7.7□□□□□ -1.18
SSBP1-201ENST00000265304 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
SSBP1-201ENST00000265304 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
SSBP1-201ENST00000265304 A8MUU9 505 aa7.69□□□□□ -1.18
SSBP1-201ENST00000265304 BPY2O14599 106 aa7.69□□□□□ -1.18
SSBP1-201ENST00000265304 Q75L30 129 aa7.69□□□□□ -1.18
SSBP1-201ENST00000265304 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
SSBP1-201ENST00000265304 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
SSBP1-201ENST00000265304 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
SSBP1-201ENST00000265304 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
SSBP1-201ENST00000265304 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
SSBP1-201ENST00000265304 CXCL6P80162 114 aa7.66□□□□□ -1.18
SSBP1-201ENST00000265304 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
SSBP1-201ENST00000265304 K7EQZ3 153 aa7.63□□□□□ -1.19
SSBP1-201ENST00000265304 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
SSBP1-201ENST00000265304 J3QR89 54 aa7.62□□□□□ -1.19
SSBP1-201ENST00000265304 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
SSBP1-201ENST00000265304 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
SSBP1-201ENST00000265304 ATP5EP2Q5VTU8 51 aa7.59□□□□□ -1.19
SSBP1-201ENST00000265304 RNF213Q63HN8 5207 aa7.59□□□□□ -1.19
SSBP1-201ENST00000265304 LINC00643Q86TS7 51 aa7.58□□□□□ -1.2
SSBP1-201ENST00000265304 Q8N9L7 120 aa7.57□□□□□ -1.2
SSBP1-201ENST00000265304 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
SSBP1-201ENST00000265304 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
SSBP1-201ENST00000265304 MUC2Q02817 5179 aa7.56□□□□□ -1.2
SSBP1-201ENST00000265304 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
SSBP1-201ENST00000265304 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
SSBP1-201ENST00000265304 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
SSBP1-201ENST00000265304 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
SSBP1-201ENST00000265304 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
SSBP1-201ENST00000265304 K7ERU9 68 aa7.52□□□□□ -1.21
SSBP1-201ENST00000265304 HCG22E2RYF7 251 aa7.5□□□□□ -1.21
SSBP1-201ENST00000265304 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
SSBP1-201ENST00000265304 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
SSBP1-201ENST00000265304 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
SSBP1-201ENST00000265304 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
SSBP1-201ENST00000265304 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
SSBP1-201ENST00000265304 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
SSBP1-201ENST00000265304 KRTAP19-2Q3LHN2 52 aa7.39□□□□□ -1.23
SSBP1-201ENST00000265304 TP53AIP1Q9HCN2 124 aa7.39□□□□□ -1.23
SSBP1-201ENST00000265304 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
SSBP1-201ENST00000265304 Q5W150 140 aa7.37□□□□□ -1.23
SSBP1-201ENST00000265304 NDUFS5O43920 106 aa7.35□□□□□ -1.23
SSBP1-201ENST00000265304 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
SSBP1-201ENST00000265304 A0A087WVE0 104 aa7.34□□□□□ -1.23
SSBP1-201ENST00000265304 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
SSBP1-201ENST00000265304 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
SSBP1-201ENST00000265304 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
SSBP1-201ENST00000265304 SPINK7P58062 85 aa7.32□□□□□ -1.24
SSBP1-201ENST00000265304 HRES1P13985 223 aa7.31□□□□□ -1.24
SSBP1-201ENST00000265304 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
SSBP1-201ENST00000265304 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
SSBP1-201ENST00000265304 FLGP20930 4061 aaPredicted RBP7.29□□□□□ -1.24
SSBP1-201ENST00000265304 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
SSBP1-201ENST00000265304 UQCRQO14949 82 aa7.26□□□□□ -1.25
SSBP1-201ENST00000265304 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
SSBP1-201ENST00000265304 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
SSBP1-201ENST00000265304 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
SSBP1-201ENST00000265304 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
SSBP1-201ENST00000265304 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
SSBP1-201ENST00000265304 ATOX1O00244 68 aa7.18□□□□□ -1.26
SSBP1-201ENST00000265304 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
SSBP1-201ENST00000265304 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
SSBP1-201ENST00000265304 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
SSBP1-201ENST00000265304 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
SSBP1-201ENST00000265304 MT1HP80294 61 aa7.15□□□□□ -1.26
SSBP1-201ENST00000265304 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
SSBP1-201ENST00000265304 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
SSBP1-201ENST00000265304 H0Y9P7 68 aa7.14□□□□□ -1.27
SSBP1-201ENST00000265304 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
SSBP1-201ENST00000265304 SMIM20Q8N5G0 67 aa7.14□□□□□ -1.27
SSBP1-201ENST00000265304 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
SSBP1-201ENST00000265304 H3BPC8 53 aa7.12□□□□□ -1.27
SSBP1-201ENST00000265304 TRAV7A0A075B6U4 112 aa7.1□□□□□ -1.27
SSBP1-201ENST00000265304 MP68P56378 58 aa7.09□□□□□ -1.27
SSBP1-201ENST00000265304 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
SSBP1-201ENST00000265304 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
SSBP1-201ENST00000265304 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
SSBP1-201ENST00000265304 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
SSBP1-201ENST00000265304 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
SSBP1-201ENST00000265304 C4orf26Q17RF5 130 aa7.05□□□□□ -1.28
SSBP1-201ENST00000265304 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms