RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KLKP1Q107X0 134 aa5.39□□□□□ -1.55
SSR3-201ENST00000265044 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
SSR3-201ENST00000265044 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
SSR3-201ENST00000265044 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
SSR3-201ENST00000265044 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
SSR3-201ENST00000265044 DNAH2Q9P225 4427 aa5.36□□□□□ -1.55
SSR3-201ENST00000265044 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
SSR3-201ENST00000265044 H7BZZ5 65 aa5.35□□□□□ -1.55
SSR3-201ENST00000265044 DNAH17Q9UFH2 4485 aa5.35□□□□□ -1.55
SSR3-201ENST00000265044 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
SSR3-201ENST00000265044 A0A0U1RQV1 116 aa5.34□□□□□ -1.55
SSR3-201ENST00000265044 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
SSR3-201ENST00000265044 H3BPC8 53 aa5.33□□□□□ -1.56
SSR3-201ENST00000265044 J3QL48 77 aa5.33□□□□□ -1.56
SSR3-201ENST00000265044 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
SSR3-201ENST00000265044 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
SSR3-201ENST00000265044 CHKB-CPT1BH3BT56 60 aa5.32□□□□□ -1.56
SSR3-201ENST00000265044 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
SSR3-201ENST00000265044 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
SSR3-201ENST00000265044 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
SSR3-201ENST00000265044 MPLKIPQ8TAP9 179 aa5.29□□□□□ -1.56
SSR3-201ENST00000265044 Q8N1X5 172 aa5.29□□□□□ -1.56
SSR3-201ENST00000265044 Q5XG85 94 aa5.28□□□□□ -1.56
SSR3-201ENST00000265044 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
SSR3-201ENST00000265044 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
SSR3-201ENST00000265044 SACSQ9NZJ4 4579 aa5.28□□□□□ -1.56
SSR3-201ENST00000265044 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
SSR3-201ENST00000265044 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
SSR3-201ENST00000265044 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
SSR3-201ENST00000265044 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
SSR3-201ENST00000265044 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
SSR3-201ENST00000265044 FAT1Q14517 4588 aa5.24□□□□□ -1.57
SSR3-201ENST00000265044 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
SSR3-201ENST00000265044 Q5W150 140 aa5.23□□□□□ -1.57
SSR3-201ENST00000265044 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
SSR3-201ENST00000265044 FRAS1Q86XX4 4008 aa5.22□□□□□ -1.57
SSR3-201ENST00000265044 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.57
SSR3-201ENST00000265044 C7orf65Q6ZTY9 151 aa5.21□□□□□ -1.57
SSR3-201ENST00000265044 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
SSR3-201ENST00000265044 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
SSR3-201ENST00000265044 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
SSR3-201ENST00000265044 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
SSR3-201ENST00000265044 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
SSR3-201ENST00000265044 ACYP2P14621 99 aa5.18□□□□□ -1.58
SSR3-201ENST00000265044 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
SSR3-201ENST00000265044 RYR2Q92736 4967 aa5.17□□□□□ -1.58
SSR3-201ENST00000265044 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
SSR3-201ENST00000265044 RYR3Q15413 4870 aa5.17□□□□□ -1.58
SSR3-201ENST00000265044 HRES1P13985 223 aa5.17□□□□□ -1.58
SSR3-201ENST00000265044 SPANXA2-OT1Q8N9U9 137 aa5.17□□□□□ -1.58
SSR3-201ENST00000265044 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
SSR3-201ENST00000265044 COA5Q86WW8 74 aa5.16□□□□□ -1.58
SSR3-201ENST00000265044 C4orf26Q17RF5 130 aa5.15□□□□□ -1.58
SSR3-201ENST00000265044 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
SSR3-201ENST00000265044 KRTAP10-8P60410 259 aa5.14□□□□□ -1.59
SSR3-201ENST00000265044 OXTP01178 125 aa5.14□□□□□ -1.59
SSR3-201ENST00000265044 PSPHP1O15172 72 aa5.13□□□□□ -1.59
SSR3-201ENST00000265044 KIAA1109Q2LD37 5005 aa5.12□□□□□ -1.59
SSR3-201ENST00000265044 SPINK7P58062 85 aa5.12□□□□□ -1.59
SSR3-201ENST00000265044 V9GYY9 64 aa5.11□□□□□ -1.59
SSR3-201ENST00000265044 PKD1P98161 4303 aa5.11□□□□□ -1.59
SSR3-201ENST00000265044 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
SSR3-201ENST00000265044 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
SSR3-201ENST00000265044 SEC61GP60059 68 aa5.09□□□□□ -1.59
SSR3-201ENST00000265044 APOBP04114 4563 aaKnown RBP5.08□□□□□ -1.6
SSR3-201ENST00000265044 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
SSR3-201ENST00000265044 A8MUU9 505 aa5.06□□□□□ -1.6
SSR3-201ENST00000265044 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
SSR3-201ENST00000265044 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
SSR3-201ENST00000265044 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
SSR3-201ENST00000265044 Q75L30 129 aa5.05□□□□□ -1.6
SSR3-201ENST00000265044 A6NED7 52 aa5.03□□□□□ -1.6
SSR3-201ENST00000265044 A8MUN3 132 aa5.02□□□□□ -1.61
SSR3-201ENST00000265044 XP32Q5T750 250 aa5.01□□□□□ -1.61
SSR3-201ENST00000265044 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
SSR3-201ENST00000265044 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
SSR3-201ENST00000265044 A0A1B0GU69 56 aa5□□□□□ -1.61
SSR3-201ENST00000265044 DMAC1Q96GE9 116 aa5□□□□□ -1.61
SSR3-201ENST00000265044 RYR1P21817 5038 aa5□□□□□ -1.61
SSR3-201ENST00000265044 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
SSR3-201ENST00000265044 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
SSR3-201ENST00000265044 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
SSR3-201ENST00000265044 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
SSR3-201ENST00000265044 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
SSR3-201ENST00000265044 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
SSR3-201ENST00000265044 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
SSR3-201ENST00000265044 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
SSR3-201ENST00000265044 Q1T7F1 81 aa4.93□□□□□ -1.62
SSR3-201ENST00000265044 HSPG2P98160 4391 aa4.93□□□□□ -1.62
SSR3-201ENST00000265044 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
SSR3-201ENST00000265044 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
SSR3-201ENST00000265044 S4R3F8 94 aa4.86□□□□□ -1.63
SSR3-201ENST00000265044 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
SSR3-201ENST00000265044 UQCR11O14957 56 aa4.84□□□□□ -1.64
SSR3-201ENST00000265044 Q5VV11 94 aa4.84□□□□□ -1.64
SSR3-201ENST00000265044 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
SSR3-201ENST00000265044 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
SSR3-201ENST00000265044 HERC2O95714 4834 aa4.8□□□□□ -1.64
SSR3-201ENST00000265044 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
SSR3-201ENST00000265044 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms