RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 HSPG2P98160 4391 aa4.79□□□□□ -1.64
COPS4-201ENST00000264389 PKHD1L1Q86WI1 4243 aa4.79□□□□□ -1.64
COPS4-201ENST00000264389 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
COPS4-201ENST00000264389 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
COPS4-201ENST00000264389 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
COPS4-201ENST00000264389 RYR1P21817 5038 aa4.78□□□□□ -1.64
COPS4-201ENST00000264389 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
COPS4-201ENST00000264389 WFDC13Q8IUB5 93 aa4.77□□□□□ -1.65
COPS4-201ENST00000264389 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
COPS4-201ENST00000264389 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
COPS4-201ENST00000264389 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 MMP24-AS1A0A0U1RRL7 71 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 CASC2Q6XLA1 102 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
COPS4-201ENST00000264389 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
COPS4-201ENST00000264389 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
COPS4-201ENST00000264389 KIAA1109Q2LD37 5005 aa4.73□□□□□ -1.65
COPS4-201ENST00000264389 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
COPS4-201ENST00000264389 hDV103S1A0JD37 113 aa4.72□□□□□ -1.65
COPS4-201ENST00000264389 COX7CP15954 63 aa4.72□□□□□ -1.65
COPS4-201ENST00000264389 KRTAP29-1A8MX34 341 aaPredicted RBP4.72□□□□□ -1.65
COPS4-201ENST00000264389 UQCRQO14949 82 aa4.72□□□□□ -1.65
COPS4-201ENST00000264389 C8orf87E5RJ46 101 aa4.71□□□□□ -1.66
COPS4-201ENST00000264389 CCDC179H3BU77 68 aa4.7□□□□□ -1.66
COPS4-201ENST00000264389 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
COPS4-201ENST00000264389 OCR1Q9BZK8 76 aa4.7□□□□□ -1.66
COPS4-201ENST00000264389 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
COPS4-201ENST00000264389 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
COPS4-201ENST00000264389 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
COPS4-201ENST00000264389 LINC00313P59037 77 aa4.67□□□□□ -1.66
COPS4-201ENST00000264389 FLG2Q5D862 2391 aaPredicted RBP4.67□□□□□ -1.66
COPS4-201ENST00000264389 NDUFS5O43920 106 aa4.66□□□□□ -1.66
COPS4-201ENST00000264389 RETNLBQ9BQ08 111 aa4.66□□□□□ -1.66
COPS4-201ENST00000264389 C20orf197Q8N268 126 aa4.66□□□□□ -1.66
COPS4-201ENST00000264389 OXTP01178 125 aa4.65□□□□□ -1.67
COPS4-201ENST00000264389 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
COPS4-201ENST00000264389 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
COPS4-201ENST00000264389 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
COPS4-201ENST00000264389 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
COPS4-201ENST00000264389 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
COPS4-201ENST00000264389 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
COPS4-201ENST00000264389 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
COPS4-201ENST00000264389 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
COPS4-201ENST00000264389 TNXBP22105 4242 aa4.63□□□□□ -1.67
COPS4-201ENST00000264389 TRAV22A0A0B4J277 110 aa4.62□□□□□ -1.67
COPS4-201ENST00000264389 H0Y9P7 68 aa4.62□□□□□ -1.67
COPS4-201ENST00000264389 MP68P56378 58 aa4.62□□□□□ -1.67
COPS4-201ENST00000264389 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
COPS4-201ENST00000264389 SNURFQ9Y675 71 aa4.62□□□□□ -1.67
COPS4-201ENST00000264389 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
COPS4-201ENST00000264389 KLKP1Q107X0 134 aa4.61□□□□□ -1.67
COPS4-201ENST00000264389 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
COPS4-201ENST00000264389 FP248Q71RG6 208 aaPredicted RBP4.6□□□□□ -1.67
COPS4-201ENST00000264389 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
COPS4-201ENST00000264389 C9orf92A6NGG3 77 aa4.6□□□□□ -1.67
COPS4-201ENST00000264389 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
COPS4-201ENST00000264389 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
COPS4-201ENST00000264389 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
COPS4-201ENST00000264389 H3BPC8 53 aa4.58□□□□□ -1.68
COPS4-201ENST00000264389 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
COPS4-201ENST00000264389 MYCBP2O75592 4640 aa4.57□□□□□ -1.68
COPS4-201ENST00000264389 NDUFC1O43677 76 aa4.57□□□□□ -1.68
COPS4-201ENST00000264389 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
COPS4-201ENST00000264389 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
COPS4-201ENST00000264389 IGLV7-46A0A075B6I9 117 aa4.55□□□□□ -1.68
COPS4-201ENST00000264389 TMEM258P61165 79 aa4.55□□□□□ -1.68
COPS4-201ENST00000264389 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
COPS4-201ENST00000264389 H7BZZ5 65 aa4.55□□□□□ -1.68
COPS4-201ENST00000264389 PRR4Q16378 134 aa4.54□□□□□ -1.68
COPS4-201ENST00000264389 Q5W150 140 aa4.54□□□□□ -1.68
COPS4-201ENST00000264389 HERC2O95714 4834 aa4.54□□□□□ -1.68
COPS4-201ENST00000264389 A8MUU9 505 aa4.53□□□□□ -1.68
COPS4-201ENST00000264389 KRTAP13-3Q3SY46 172 aa4.53□□□□□ -1.68
COPS4-201ENST00000264389 C20orf166-AS1Q96NR2 134 aa4.53□□□□□ -1.68
COPS4-201ENST00000264389 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
COPS4-201ENST00000264389 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
COPS4-201ENST00000264389 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
COPS4-201ENST00000264389 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
COPS4-201ENST00000264389 Q75L30 129 aa4.5□□□□□ -1.69
COPS4-201ENST00000264389 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
COPS4-201ENST00000264389 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
COPS4-201ENST00000264389 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
COPS4-201ENST00000264389 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
COPS4-201ENST00000264389 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
COPS4-201ENST00000264389 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
COPS4-201ENST00000264389 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
COPS4-201ENST00000264389 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
COPS4-201ENST00000264389 RPL37P61927 97 aaKnown RBP4.46□□□□□ -1.69
COPS4-201ENST00000264389 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.69
COPS4-201ENST00000264389 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
COPS4-201ENST00000264389 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
COPS4-201ENST00000264389 ATP11AUNQ6ZP68 121 aa4.44□□□□□ -1.7
COPS4-201ENST00000264389 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
COPS4-201ENST00000264389 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms