RNA–Protein interactions for RNA: ENST00000261590.12

DSG2-201, Transcript of desmoglein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG2, Length 5,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG2-201ENST00000261590 XIRP2A4UGR9 3374 aa11.28□□□□□ -0.6
DSG2-201ENST00000261590 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
DSG2-201ENST00000261590 TACC2O95359 2948 aa11.22□□□□□ -0.61
DSG2-201ENST00000261590 DMXL2Q8TDJ6 3036 aa11.21□□□□□ -0.61
DSG2-201ENST00000261590 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
DSG2-201ENST00000261590 KRTAP12-2P59991 146 aa11.19□□□□□ -0.62
DSG2-201ENST00000261590 UNC80Q8N2C7 3258 aa11.17□□□□□ -0.62
DSG2-201ENST00000261590 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
DSG2-201ENST00000261590 KALRNO60229 2985 aa11.13□□□□□ -0.63
DSG2-201ENST00000261590 KRTAP21-3Q3LHN1 58 aa11.13□□□□□ -0.63
DSG2-201ENST00000261590 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
DSG2-201ENST00000261590 REV3LO60673 3130 aa11.11□□□□□ -0.63
DSG2-201ENST00000261590 KRTAP13-4Q3LI77 160 aa11.07□□□□□ -0.64
DSG2-201ENST00000261590 HIVEP1P15822 2718 aa11.07□□□□□ -0.64
DSG2-201ENST00000261590 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
DSG2-201ENST00000261590 CELSR3Q9NYQ7 3312 aa11.02□□□□□ -0.65
DSG2-201ENST00000261590 FLNCQ14315 2725 aa11□□□□□ -0.65
DSG2-201ENST00000261590 NBEAQ8NFP9 2946 aa10.98□□□□□ -0.65
DSG2-201ENST00000261590 ATMQ13315 3056 aa10.96□□□□□ -0.65
DSG2-201ENST00000261590 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
DSG2-201ENST00000261590 KRTAP12-1P59990 96 aa10.9□□□□□ -0.66
DSG2-201ENST00000261590 LAMA1P25391 3075 aa10.9□□□□□ -0.66
DSG2-201ENST00000261590 TENM4Q6N022 2769 aa10.85□□□□□ -0.67
DSG2-201ENST00000261590 KRTAP15-1Q3LI76 137 aa10.84□□□□□ -0.67
DSG2-201ENST00000261590 BOD1L1Q8NFC6 3051 aa10.84□□□□□ -0.67
DSG2-201ENST00000261590 CELSR2Q9HCU4 2923 aa10.83□□□□□ -0.68
DSG2-201ENST00000261590 ADGRG4Q8IZF6 3080 aa10.83□□□□□ -0.68
DSG2-201ENST00000261590 FRYLO94915 3013 aa10.82□□□□□ -0.68
DSG2-201ENST00000261590 NIPBLQ6KC79 2804 aaeCLIP10.79□□□□□ -0.68
DSG2-201ENST00000261590 CRYBG3Q68DQ2 2970 aa10.76□□□□□ -0.69
DSG2-201ENST00000261590 LRBAP50851 2863 aa10.74□□□□□ -0.69
DSG2-201ENST00000261590 CDH23Q9H251 3354 aa10.72□□□□□ -0.69
DSG2-201ENST00000261590 TGP01266 2768 aa10.69□□□□□ -0.7
DSG2-201ENST00000261590 VCANP13611 3396 aa10.68□□□□□ -0.7
DSG2-201ENST00000261590 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
DSG2-201ENST00000261590 DCHS2Q6V1P9 2916 aa10.63□□□□□ -0.71
DSG2-201ENST00000261590 TENM3Q9P273 2699 aa10.62□□□□□ -0.71
DSG2-201ENST00000261590 CFAP47Q6ZTR5 3102 aa10.6□□□□□ -0.71
DSG2-201ENST00000261590 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
DSG2-201ENST00000261590 COL6A3P12111 3177 aa10.53□□□□□ -0.72
DSG2-201ENST00000261590 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
DSG2-201ENST00000261590 DNAH14Q0VDD8 3507 aa10.52□□□□□ -0.72
DSG2-201ENST00000261590 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
DSG2-201ENST00000261590 INE1O15225 51 aa10.5□□□□□ -0.73
DSG2-201ENST00000261590 ZANQ9Y493 2812 aa10.5□□□□□ -0.73
DSG2-201ENST00000261590 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
DSG2-201ENST00000261590 NF1P21359 2839 aa10.39□□□□□ -0.75
DSG2-201ENST00000261590 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
DSG2-201ENST00000261590 MYO15AQ9UKN7 3530 aa10.34□□□□□ -0.75
DSG2-201ENST00000261590 KRTAP10-6P60371 365 aaPredicted RBP10.34□□□□□ -0.75
DSG2-201ENST00000261590 TENM2Q9NT68 2774 aa10.33□□□□□ -0.76
DSG2-201ENST00000261590 SPEGQ15772 3267 aa10.32□□□□□ -0.76
DSG2-201ENST00000261590 CRCT1Q9UGL9 99 aa10.27□□□□□ -0.76
DSG2-201ENST00000261590 FBN2P35556 2912 aa10.26□□□□□ -0.77
DSG2-201ENST00000261590 PDZD2O15018 2839 aa10.21□□□□□ -0.77
DSG2-201ENST00000261590 TNRC18O15417 2968 aaPredicted RBP10.16□□□□□ -0.78
DSG2-201ENST00000261590 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
DSG2-201ENST00000261590 KRTAP10-12P60413 245 aa10.1□□□□□ -0.79
DSG2-201ENST00000261590 PKD1L1Q8TDX9 2849 aa10.06□□□□□ -0.8
DSG2-201ENST00000261590 DMXL1Q9Y485 3027 aa10.05□□□□□ -0.8
DSG2-201ENST00000261590 DMDP11532 3685 aa10.02□□□□□ -0.81
DSG2-201ENST00000261590 HRNRQ86YZ3 2850 aaPredicted RBP10.01□□□□□ -0.81
DSG2-201ENST00000261590 CELSR1Q9NYQ6 3014 aa9.97□□□□□ -0.81
DSG2-201ENST00000261590 LOC400499M0QZD8 3231 aa9.89□□□□□ -0.83
DSG2-201ENST00000261590 VWFP04275 2813 aa9.88□□□□□ -0.83
DSG2-201ENST00000261590 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
DSG2-201ENST00000261590 KRTAP12-3P60328 96 aa9.85□□□□□ -0.83
DSG2-201ENST00000261590 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
DSG2-201ENST00000261590 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
DSG2-201ENST00000261590 SRRM2Q9UQ35 2752 aaKnown RBP9.72□□□□□ -0.85
DSG2-201ENST00000261590 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
DSG2-201ENST00000261590 LCE3AQ5TA76 89 aa9.68□□□□□ -0.86
DSG2-201ENST00000261590 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
DSG2-201ENST00000261590 KRTAP23-1A1A580 65 aa9.62□□□□□ -0.87
DSG2-201ENST00000261590 MUC3AQ02505 3323 aa9.6□□□□□ -0.87
DSG2-201ENST00000261590 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
DSG2-201ENST00000261590 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
DSG2-201ENST00000261590 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
DSG2-201ENST00000261590 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
DSG2-201ENST00000261590 RELNP78509 3460 aa9.45□□□□□ -0.9
DSG2-201ENST00000261590 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
DSG2-201ENST00000261590 MEGF8Q7Z7M0 2845 aa9.35□□□□□ -0.91
DSG2-201ENST00000261590 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
DSG2-201ENST00000261590 LAMA5O15230 3695 aa9.29□□□□□ -0.92
DSG2-201ENST00000261590 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
DSG2-201ENST00000261590 BSNQ9UPA5 3926 aa9.25□□□□□ -0.93
DSG2-201ENST00000261590 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
DSG2-201ENST00000261590 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
DSG2-201ENST00000261590 COL7A1Q02388 2944 aa9.16□□□□□ -0.94
DSG2-201ENST00000261590 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
DSG2-201ENST00000261590 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
DSG2-201ENST00000261590 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.97
DSG2-201ENST00000261590 ZFHX3Q15911 3703 aa9.01□□□□□ -0.97
DSG2-201ENST00000261590 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.98
DSG2-201ENST00000261590 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
DSG2-201ENST00000261590 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
DSG2-201ENST00000261590 CUBNO60494 3623 aa8.83□□□□□ -1
DSG2-201ENST00000261590 SVEP1Q4LDE5 3571 aa8.82□□□□□ -1
DSG2-201ENST00000261590 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
DSG2-201ENST00000261590 CSMD2Q7Z408 3487 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms