RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 H3BPC8 53 aa11.32□□□□□ -0.6
LPCAT3-201ENST00000261407 NDUFS5O43920 106 aa11.32□□□□□ -0.6
LPCAT3-201ENST00000261407 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
LPCAT3-201ENST00000261407 PCOTHQ58A44 107 aa11.29□□□□□ -0.6
LPCAT3-201ENST00000261407 KRTAP10-1P60331 282 aa11.26□□□□□ -0.61
LPCAT3-201ENST00000261407 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
LPCAT3-201ENST00000261407 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
LPCAT3-201ENST00000261407 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
LPCAT3-201ENST00000261407 TP53AIP1Q9HCN2 124 aa11.24□□□□□ -0.61
LPCAT3-201ENST00000261407 CD164Q04900 197 aa11.23□□□□□ -0.61
LPCAT3-201ENST00000261407 BRK1Q8WUW1 75 aa11.23□□□□□ -0.61
LPCAT3-201ENST00000261407 Q1T7F1 81 aa11.22□□□□□ -0.61
LPCAT3-201ENST00000261407 PSPHP1O15172 72 aa11.21□□□□□ -0.61
LPCAT3-201ENST00000261407 PRO0628Q9UI54 55 aa11.19□□□□□ -0.62
LPCAT3-201ENST00000261407 KRTAP13-2Q52LG2 175 aa11.19□□□□□ -0.62
LPCAT3-201ENST00000261407 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
LPCAT3-201ENST00000261407 Q5W150 140 aa11.17□□□□□ -0.62
LPCAT3-201ENST00000261407 Q6ZSA8 131 aa11.17□□□□□ -0.62
LPCAT3-201ENST00000261407 SSBP3-AS1Q7Z2R9 100 aa11.16□□□□□ -0.62
LPCAT3-201ENST00000261407 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
LPCAT3-201ENST00000261407 COA5Q86WW8 74 aa11.11□□□□□ -0.63
LPCAT3-201ENST00000261407 A8MUN3 132 aa11.1□□□□□ -0.63
LPCAT3-201ENST00000261407 Q8N9P0 234 aaPredicted RBP11.1□□□□□ -0.63
LPCAT3-201ENST00000261407 KRTAP1-4P0C5Y4 121 aa11.07□□□□□ -0.64
LPCAT3-201ENST00000261407 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
LPCAT3-201ENST00000261407 SACSQ9NZJ4 4579 aa11.07□□□□□ -0.64
LPCAT3-201ENST00000261407 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
LPCAT3-201ENST00000261407 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
LPCAT3-201ENST00000261407 LINC00313P59037 77 aa11.01□□□□□ -0.65
LPCAT3-201ENST00000261407 Q5VV11 94 aa11.01□□□□□ -0.65
LPCAT3-201ENST00000261407 HRES1P13985 223 aa10.99□□□□□ -0.65
LPCAT3-201ENST00000261407 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
LPCAT3-201ENST00000261407 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
LPCAT3-201ENST00000261407 A8MU10 97 aa10.97□□□□□ -0.65
LPCAT3-201ENST00000261407 V9GYY9 64 aa10.97□□□□□ -0.65
LPCAT3-201ENST00000261407 PLA2G1BP04054 148 aaKnown RBP10.96□□□□□ -0.66
LPCAT3-201ENST00000261407 PRR15LQ9BU68 103 aa10.96□□□□□ -0.66
LPCAT3-201ENST00000261407 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
LPCAT3-201ENST00000261407 LIMD2Q9BT23 127 aa10.93□□□□□ -0.66
LPCAT3-201ENST00000261407 DYNC1H1Q14204 4646 aaKnown RBP10.93□□□□□ -0.66
LPCAT3-201ENST00000261407 FAT1Q14517 4588 aa10.91□□□□□ -0.66
LPCAT3-201ENST00000261407 KRTAP16-1A8MUX0 517 aa10.91□□□□□ -0.66
LPCAT3-201ENST00000261407 CHKB-CPT1BH3BT56 60 aa10.89□□□□□ -0.67
LPCAT3-201ENST00000261407 KRTAP21-3Q3LHN1 58 aa10.88□□□□□ -0.67
LPCAT3-201ENST00000261407 TYMSOSQ8TAI1 123 aa10.88□□□□□ -0.67
LPCAT3-201ENST00000261407 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
LPCAT3-201ENST00000261407 PRR26Q8N8Z3 221 aa10.86□□□□□ -0.67
LPCAT3-201ENST00000261407 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
LPCAT3-201ENST00000261407 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
LPCAT3-201ENST00000261407 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
LPCAT3-201ENST00000261407 LINC01558Q9Y6Z2 57 aa10.79□□□□□ -0.68
LPCAT3-201ENST00000261407 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
LPCAT3-201ENST00000261407 Q75L30 129 aa10.78□□□□□ -0.68
LPCAT3-201ENST00000261407 SPINK1P00995 79 aa10.77□□□□□ -0.69
LPCAT3-201ENST00000261407 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
LPCAT3-201ENST00000261407 ACYP2P14621 99 aa10.74□□□□□ -0.69
LPCAT3-201ENST00000261407 LCA10Q71F78 164 aa10.74□□□□□ -0.69
LPCAT3-201ENST00000261407 A6NED7 52 aa10.74□□□□□ -0.69
LPCAT3-201ENST00000261407 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
LPCAT3-201ENST00000261407 LINC00304Q8N9R0 145 aa10.71□□□□□ -0.69
LPCAT3-201ENST00000261407 KMT2CQ8NEZ4 4911 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-201ENST00000261407 SPINK7P58062 85 aa10.67□□□□□ -0.7
LPCAT3-201ENST00000261407 A0A1B0GVY2 172 aa10.66□□□□□ -0.7
LPCAT3-201ENST00000261407 RYR2Q92736 4967 aa10.66□□□□□ -0.7
LPCAT3-201ENST00000261407 PKHD1L1Q86WI1 4243 aa10.65□□□□□ -0.7
LPCAT3-201ENST00000261407 KRTAP10-4P60372 401 aaPredicted RBP10.63□□□□□ -0.71
LPCAT3-201ENST00000261407 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
LPCAT3-201ENST00000261407 C9orf92A6NGG3 77 aa10.59□□□□□ -0.71
LPCAT3-201ENST00000261407 PMAIP1Q13794 54 aa10.58□□□□□ -0.72
LPCAT3-201ENST00000261407 CDC42SE1Q9NRR8 79 aa10.56□□□□□ -0.72
LPCAT3-201ENST00000261407 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
LPCAT3-201ENST00000261407 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
LPCAT3-201ENST00000261407 Q8N1X5 172 aa10.51□□□□□ -0.73
LPCAT3-201ENST00000261407 LRP1Q07954 4544 aaKnown RBP10.51□□□□□ -0.73
LPCAT3-201ENST00000261407 ATP11AUNQ6ZP68 121 aa10.5□□□□□ -0.73
LPCAT3-201ENST00000261407 A0A1B0GU69 56 aa10.45□□□□□ -0.74
LPCAT3-201ENST00000261407 A8MUU9 505 aa10.4□□□□□ -0.75
LPCAT3-201ENST00000261407 C20orf166-AS1Q96NR2 134 aa10.4□□□□□ -0.75
LPCAT3-201ENST00000261407 A6NN06 94 aa10.39□□□□□ -0.75
LPCAT3-201ENST00000261407 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
LPCAT3-201ENST00000261407 TNXBP22105 4242 aa10.38□□□□□ -0.75
LPCAT3-201ENST00000261407 FAT3Q8TDW7 4589 aa10.38□□□□□ -0.75
LPCAT3-201ENST00000261407 HSPG2P98160 4391 aa10.36□□□□□ -0.75
LPCAT3-201ENST00000261407 RYR3Q15413 4870 aa10.35□□□□□ -0.75
LPCAT3-201ENST00000261407 KRTAP3-1Q9BYR8 98 aa10.31□□□□□ -0.76
LPCAT3-201ENST00000261407 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
LPCAT3-201ENST00000261407 KTN1-AS1Q86SY8 53 aa10.27□□□□□ -0.77
LPCAT3-201ENST00000261407 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
LPCAT3-201ENST00000261407 UQCR11O14957 56 aa10.22□□□□□ -0.77
LPCAT3-201ENST00000261407 MIR22HGQ0VDD5 57 aa10.21□□□□□ -0.77
LPCAT3-201ENST00000261407 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.77
LPCAT3-201ENST00000261407 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.78
LPCAT3-201ENST00000261407 Q5VSD8 79 aa10.19□□□□□ -0.78
LPCAT3-201ENST00000261407 RYR1P21817 5038 aa10.18□□□□□ -0.78
LPCAT3-201ENST00000261407 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
LPCAT3-201ENST00000261407 KIAA1109Q2LD37 5005 aa10.15□□□□□ -0.79
LPCAT3-201ENST00000261407 SEC61GP60059 68 aa10.12□□□□□ -0.79
LPCAT3-201ENST00000261407 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
LPCAT3-201ENST00000261407 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
LPCAT3-201ENST00000261407 RBM12B-AS1Q9P1G2 102 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms