RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PDE6GP18545 87 aa9.03□□□□□ -0.96
CCDC90B-201ENST00000260054 HERC1Q15751 4861 aa9.02□□□□□ -0.96
CCDC90B-201ENST00000260054 A0A087WSZ3 146 aa9□□□□□ -0.97
CCDC90B-201ENST00000260054 LIMD2Q9BT23 127 aa9□□□□□ -0.97
CCDC90B-201ENST00000260054 Q5XG85 94 aa9□□□□□ -0.97
CCDC90B-201ENST00000260054 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
CCDC90B-201ENST00000260054 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
CCDC90B-201ENST00000260054 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
CCDC90B-201ENST00000260054 A0A1B0GW54 56 aa8.93□□□□□ -0.98
CCDC90B-201ENST00000260054 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
CCDC90B-201ENST00000260054 TRAV7A0A075B6U4 112 aa8.92□□□□□ -0.98
CCDC90B-201ENST00000260054 CXCL6P80162 114 aa8.91□□□□□ -0.98
CCDC90B-201ENST00000260054 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
CCDC90B-201ENST00000260054 Q6ZVQ6 151 aa8.9□□□□□ -0.98
CCDC90B-201ENST00000260054 Q96NJ1 140 aa8.88□□□□□ -0.99
CCDC90B-201ENST00000260054 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
CCDC90B-201ENST00000260054 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
CCDC90B-201ENST00000260054 PRR4Q16378 134 aa8.87□□□□□ -0.99
CCDC90B-201ENST00000260054 C20orf197Q8N268 126 aa8.87□□□□□ -0.99
CCDC90B-201ENST00000260054 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
CCDC90B-201ENST00000260054 KLKP1Q107X0 134 aa8.85□□□□□ -0.99
CCDC90B-201ENST00000260054 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-201ENST00000260054 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
CCDC90B-201ENST00000260054 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
CCDC90B-201ENST00000260054 NREPQ16612 68 aa8.83□□□□□ -1
CCDC90B-201ENST00000260054 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
CCDC90B-201ENST00000260054 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
CCDC90B-201ENST00000260054 H7BZZ5 65 aa8.81□□□□□ -1
CCDC90B-201ENST00000260054 NDUFC1O43677 76 aa8.81□□□□□ -1
CCDC90B-201ENST00000260054 IGKV4-1P06312 121 aa8.8□□□□□ -1
CCDC90B-201ENST00000260054 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
CCDC90B-201ENST00000260054 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
CCDC90B-201ENST00000260054 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
CCDC90B-201ENST00000260054 LPAP08519 4548 aa8.74□□□□□ -1.01
CCDC90B-201ENST00000260054 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
CCDC90B-201ENST00000260054 BPY2O14599 106 aa8.72□□□□□ -1.01
CCDC90B-201ENST00000260054 DSCR10P59022 87 aa8.71□□□□□ -1.02
CCDC90B-201ENST00000260054 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
CCDC90B-201ENST00000260054 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
CCDC90B-201ENST00000260054 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
CCDC90B-201ENST00000260054 A8MWP4 228 aa8.69□□□□□ -1.02
CCDC90B-201ENST00000260054 LRP2P98164 4655 aa8.69□□□□□ -1.02
CCDC90B-201ENST00000260054 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
CCDC90B-201ENST00000260054 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
CCDC90B-201ENST00000260054 NDUFB1O75438 58 aa8.66□□□□□ -1.02
CCDC90B-201ENST00000260054 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
CCDC90B-201ENST00000260054 K7EQZ3 153 aa8.65□□□□□ -1.02
CCDC90B-201ENST00000260054 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
CCDC90B-201ENST00000260054 Q8N9L7 120 aa8.65□□□□□ -1.03
CCDC90B-201ENST00000260054 PRR15Q8IV56 129 aa8.64□□□□□ -1.03
CCDC90B-201ENST00000260054 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
CCDC90B-201ENST00000260054 LINC00313P59037 77 aa8.62□□□□□ -1.03
CCDC90B-201ENST00000260054 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
CCDC90B-201ENST00000260054 XP32Q5T750 250 aa8.62□□□□□ -1.03
CCDC90B-201ENST00000260054 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
CCDC90B-201ENST00000260054 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
CCDC90B-201ENST00000260054 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
CCDC90B-201ENST00000260054 PRO0628Q9UI54 55 aa8.57□□□□□ -1.04
CCDC90B-201ENST00000260054 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
CCDC90B-201ENST00000260054 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
CCDC90B-201ENST00000260054 UBR4Q5T4S7 5183 aa8.51□□□□□ -1.05
CCDC90B-201ENST00000260054 hDV103S1A0JD37 113 aa8.5□□□□□ -1.05
CCDC90B-201ENST00000260054 WFDC13Q8IUB5 93 aa8.5□□□□□ -1.05
CCDC90B-201ENST00000260054 A8MUU9 505 aa8.49□□□□□ -1.05
CCDC90B-201ENST00000260054 RPL37P61927 97 aaKnown RBP8.49□□□□□ -1.05
CCDC90B-201ENST00000260054 Q75L30 129 aa8.49□□□□□ -1.05
CCDC90B-201ENST00000260054 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
CCDC90B-201ENST00000260054 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
CCDC90B-201ENST00000260054 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
CCDC90B-201ENST00000260054 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.05
CCDC90B-201ENST00000260054 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
CCDC90B-201ENST00000260054 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-201ENST00000260054 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
CCDC90B-201ENST00000260054 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
CCDC90B-201ENST00000260054 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
CCDC90B-201ENST00000260054 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
CCDC90B-201ENST00000260054 NDUFS5O43920 106 aa8.38□□□□□ -1.07
CCDC90B-201ENST00000260054 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
CCDC90B-201ENST00000260054 BRK1Q8WUW1 75 aa8.36□□□□□ -1.07
CCDC90B-201ENST00000260054 Q1T7F1 81 aa8.35□□□□□ -1.07
CCDC90B-201ENST00000260054 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
CCDC90B-201ENST00000260054 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.08
CCDC90B-201ENST00000260054 MP68P56378 58 aa8.32□□□□□ -1.08
CCDC90B-201ENST00000260054 KRTAP4-1Q9BYQ7 146 aa8.32□□□□□ -1.08
CCDC90B-201ENST00000260054 H3BPC8 53 aa8.31□□□□□ -1.08
CCDC90B-201ENST00000260054 MUC2Q02817 5179 aa8.3□□□□□ -1.08
CCDC90B-201ENST00000260054 Q5W150 140 aa8.29□□□□□ -1.08
CCDC90B-201ENST00000260054 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
CCDC90B-201ENST00000260054 V9GYY9 64 aa8.27□□□□□ -1.08
CCDC90B-201ENST00000260054 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
CCDC90B-201ENST00000260054 TP53AIP1Q9HCN2 124 aa8.27□□□□□ -1.09
CCDC90B-201ENST00000260054 H0Y9P7 68 aa8.21□□□□□ -1.09
CCDC90B-201ENST00000260054 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
CCDC90B-201ENST00000260054 LINC00208Q96KT6 92 aa8.21□□□□□ -1.1
CCDC90B-201ENST00000260054 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
CCDC90B-201ENST00000260054 SPINK7P58062 85 aa8.18□□□□□ -1.1
CCDC90B-201ENST00000260054 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
CCDC90B-201ENST00000260054 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
CCDC90B-201ENST00000260054 PSPHP1O15172 72 aa8.12□□□□□ -1.11
CCDC90B-201ENST00000260054 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms