RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
SCO1-201ENST00000255390 FLNCQ14315 2725 aa6.23□□□□□ -1.41
SCO1-201ENST00000255390 TENM1Q9UKZ4 2725 aa6.23□□□□□ -1.41
SCO1-201ENST00000255390 DMXL2Q8TDJ6 3036 aa6.23□□□□□ -1.41
SCO1-201ENST00000255390 LAMA1P25391 3075 aa6.19□□□□□ -1.42
SCO1-201ENST00000255390 HIVEP1P15822 2718 aa6.17□□□□□ -1.42
SCO1-201ENST00000255390 CHD7Q9P2D1 2997 aa6.16□□□□□ -1.42
SCO1-201ENST00000255390 HTTP42858 3142 aa6.15□□□□□ -1.43
SCO1-201ENST00000255390 DNAH14Q0VDD8 3507 aa6.15□□□□□ -1.43
SCO1-201ENST00000255390 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
SCO1-201ENST00000255390 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
SCO1-201ENST00000255390 LAMA3Q16787 3333 aa6.11□□□□□ -1.43
SCO1-201ENST00000255390 NF1P21359 2839 aa6.09□□□□□ -1.43
SCO1-201ENST00000255390 BRCA2P51587 3418 aa6.09□□□□□ -1.43
SCO1-201ENST00000255390 XP32Q5T750 250 aa6.07□□□□□ -1.44
SCO1-201ENST00000255390 ZZEF1O43149 2961 aa6.06□□□□□ -1.44
SCO1-201ENST00000255390 COL6A3P12111 3177 aa6.05□□□□□ -1.44
SCO1-201ENST00000255390 USP34Q70CQ2 3546 aa6.04□□□□□ -1.44
SCO1-201ENST00000255390 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
SCO1-201ENST00000255390 CFAP47Q6ZTR5 3102 aa6.03□□□□□ -1.44
SCO1-201ENST00000255390 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
SCO1-201ENST00000255390 SPEGQ15772 3267 aa6.02□□□□□ -1.45
SCO1-201ENST00000255390 ATMQ13315 3056 aa6.02□□□□□ -1.45
SCO1-201ENST00000255390 VCANP13611 3396 aa6.01□□□□□ -1.45
SCO1-201ENST00000255390 TPRXLQ17RH7 258 aa6□□□□□ -1.45
SCO1-201ENST00000255390 BOD1L1Q8NFC6 3051 aa5.99□□□□□ -1.45
SCO1-201ENST00000255390 TNRC18O15417 2968 aaPredicted RBP5.99□□□□□ -1.45
SCO1-201ENST00000255390 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
SCO1-201ENST00000255390 H0YAA0 97 aa5.98□□□□□ -1.45
SCO1-201ENST00000255390 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
SCO1-201ENST00000255390 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.45
SCO1-201ENST00000255390 TGP01266 2768 aa5.96□□□□□ -1.46
SCO1-201ENST00000255390 PDZD2O15018 2839 aa5.93□□□□□ -1.46
SCO1-201ENST00000255390 CELSR1Q9NYQ6 3014 aa5.93□□□□□ -1.46
SCO1-201ENST00000255390 TENM4Q6N022 2769 aa5.93□□□□□ -1.46
SCO1-201ENST00000255390 TACC2O95359 2948 aa5.92□□□□□ -1.46
SCO1-201ENST00000255390 ADGRG4Q8IZF6 3080 aa5.89□□□□□ -1.47
SCO1-201ENST00000255390 CDH23Q9H251 3354 aa5.87□□□□□ -1.47
SCO1-201ENST00000255390 DMXL1Q9Y485 3027 aa5.85□□□□□ -1.47
SCO1-201ENST00000255390 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
SCO1-201ENST00000255390 NBEAQ8NFP9 2946 aa5.79□□□□□ -1.48
SCO1-201ENST00000255390 VWFP04275 2813 aa5.79□□□□□ -1.48
SCO1-201ENST00000255390 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
SCO1-201ENST00000255390 ZFHX4Q86UP3 3567 aa5.79□□□□□ -1.48
SCO1-201ENST00000255390 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
SCO1-201ENST00000255390 SZT2Q5T011 3432 aa5.78□□□□□ -1.48
SCO1-201ENST00000255390 PKD1L1Q8TDX9 2849 aa5.77□□□□□ -1.49
SCO1-201ENST00000255390 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
SCO1-201ENST00000255390 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
SCO1-201ENST00000255390 NBPF19A0A087WUL8 3843 aa5.72□□□□□ -1.49
SCO1-201ENST00000255390 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
SCO1-201ENST00000255390 SRRM2Q9UQ35 2752 aaKnown RBP5.69□□□□□ -1.5
SCO1-201ENST00000255390 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SCO1-201ENST00000255390 ASPMQ8IZT6 3477 aa5.66□□□□□ -1.5
SCO1-201ENST00000255390 FBN2P35556 2912 aa5.62□□□□□ -1.51
SCO1-201ENST00000255390 WDFY3Q8IZQ1 3526 aa5.62□□□□□ -1.51
SCO1-201ENST00000255390 SPTBN5Q9NRC6 3674 aaKnown RBP5.61□□□□□ -1.51
SCO1-201ENST00000255390 LOC400499M0QZD8 3231 aa5.6□□□□□ -1.51
SCO1-201ENST00000255390 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
SCO1-201ENST00000255390 EYSQ5T1H1 3165 aa5.58□□□□□ -1.52
SCO1-201ENST00000255390 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
SCO1-201ENST00000255390 MYO15AQ9UKN7 3530 aa5.51□□□□□ -1.53
SCO1-201ENST00000255390 LAMA5O15230 3695 aa5.51□□□□□ -1.53
SCO1-201ENST00000255390 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
SCO1-201ENST00000255390 MXRA5Q9NR99 2828 aa5.49□□□□□ -1.53
SCO1-201ENST00000255390 INE1O15225 51 aa5.48□□□□□ -1.53
SCO1-201ENST00000255390 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
SCO1-201ENST00000255390 MEGF8Q7Z7M0 2845 aa5.42□□□□□ -1.54
SCO1-201ENST00000255390 DCHS1Q96JQ0 3298 aa5.41□□□□□ -1.54
SCO1-201ENST00000255390 ZFHX3Q15911 3703 aa5.4□□□□□ -1.55
SCO1-201ENST00000255390 SPENQ96T58 3664 aaKnown RBP5.34□□□□□ -1.56
SCO1-201ENST00000255390 RELNP78509 3460 aa5.33□□□□□ -1.56
SCO1-201ENST00000255390 HRNRQ86YZ3 2850 aaPredicted RBP5.33□□□□□ -1.56
SCO1-201ENST00000255390 SMG1Q96Q15 3661 aaKnown RBP5.33□□□□□ -1.56
SCO1-201ENST00000255390 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SCO1-201ENST00000255390 CSMD1Q96PZ7 3565 aa5.3□□□□□ -1.56
SCO1-201ENST00000255390 DMDP11532 3685 aa5.24□□□□□ -1.57
SCO1-201ENST00000255390 FBN3Q75N90 2809 aa5.18□□□□□ -1.58
SCO1-201ENST00000255390 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
SCO1-201ENST00000255390 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.6
SCO1-201ENST00000255390 CUBNO60494 3623 aa5.08□□□□□ -1.6
SCO1-201ENST00000255390 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
SCO1-201ENST00000255390 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
SCO1-201ENST00000255390 OTOGQ6ZRI0 2925 aa5.07□□□□□ -1.6
SCO1-201ENST00000255390 FBN1P35555 2871 aaKnown RBP5.04□□□□□ -1.6
SCO1-201ENST00000255390 VPS13CQ709C8 3753 aa5□□□□□ -1.61
SCO1-201ENST00000255390 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
SCO1-201ENST00000255390 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
SCO1-201ENST00000255390 MUC3AQ02505 3323 aa4.99□□□□□ -1.61
SCO1-201ENST00000255390 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
SCO1-201ENST00000255390 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
SCO1-201ENST00000255390 SVEP1Q4LDE5 3571 aa4.95□□□□□ -1.62
SCO1-201ENST00000255390 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SCO1-201ENST00000255390 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
SCO1-201ENST00000255390 CSMD2Q7Z408 3487 aa4.86□□□□□ -1.63
SCO1-201ENST00000255390 AKAP9Q99996 3911 aa4.81□□□□□ -1.64
SCO1-201ENST00000255390 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
SCO1-201ENST00000255390 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
SCO1-201ENST00000255390 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
SCO1-201ENST00000255390 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms