RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 Q5VV11 94 aa5.17□□□□□ -1.58
PDE6A-201ENST00000255266 ITPR1Q14643 2758 aa5.17□□□□□ -1.58
PDE6A-201ENST00000255266 NOTCH1P46531 2555 aa5.17□□□□□ -1.58
PDE6A-201ENST00000255266 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
PDE6A-201ENST00000255266 CFAP47Q6ZTR5 3102 aa5.16□□□□□ -1.58
PDE6A-201ENST00000255266 ATMQ13315 3056 aa5.15□□□□□ -1.58
PDE6A-201ENST00000255266 LAMA5O15230 3695 aa5.15□□□□□ -1.58
PDE6A-201ENST00000255266 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
PDE6A-201ENST00000255266 KALRNO60229 2985 aa5.15□□□□□ -1.59
PDE6A-201ENST00000255266 LRBAP50851 2863 aa5.14□□□□□ -1.59
PDE6A-201ENST00000255266 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
PDE6A-201ENST00000255266 ZFHX4Q86UP3 3567 aa5.14□□□□□ -1.59
PDE6A-201ENST00000255266 TACC2O95359 2948 aa5.12□□□□□ -1.59
PDE6A-201ENST00000255266 ZZEF1O43149 2961 aa5.11□□□□□ -1.59
PDE6A-201ENST00000255266 A8MUU9 505 aa5.11□□□□□ -1.59
PDE6A-201ENST00000255266 DCHS1Q96JQ0 3298 aa5.11□□□□□ -1.59
PDE6A-201ENST00000255266 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
PDE6A-201ENST00000255266 M0QZ58 72 aa5.1□□□□□ -1.59
PDE6A-201ENST00000255266 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
PDE6A-201ENST00000255266 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
PDE6A-201ENST00000255266 XP32Q5T750 250 aa5.07□□□□□ -1.6
PDE6A-201ENST00000255266 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
PDE6A-201ENST00000255266 COL12A1Q99715 3063 aa5.06□□□□□ -1.6
PDE6A-201ENST00000255266 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
PDE6A-201ENST00000255266 RELNP78509 3460 aa5.05□□□□□ -1.6
PDE6A-201ENST00000255266 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
PDE6A-201ENST00000255266 A6NN06 94 aa5.04□□□□□ -1.6
PDE6A-201ENST00000255266 ASH1LQ9NR48 2969 aaKnown RBP5.03□□□□□ -1.6
PDE6A-201ENST00000255266 PDZD2O15018 2839 aa5.02□□□□□ -1.61
PDE6A-201ENST00000255266 NBEAL1Q6ZS30 2694 aa5□□□□□ -1.61
PDE6A-201ENST00000255266 SMG1Q96Q15 3661 aaKnown RBP5□□□□□ -1.61
PDE6A-201ENST00000255266 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
PDE6A-201ENST00000255266 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
PDE6A-201ENST00000255266 NBEAL2Q6ZNJ1 2754 aa4.93□□□□□ -1.62
PDE6A-201ENST00000255266 NIPBLQ6KC79 2804 aaeCLIP4.93□□□□□ -1.62
PDE6A-201ENST00000255266 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
PDE6A-201ENST00000255266 CSMD1Q96PZ7 3565 aa4.91□□□□□ -1.62
PDE6A-201ENST00000255266 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
PDE6A-201ENST00000255266 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.63
PDE6A-201ENST00000255266 CRYBG3Q68DQ2 2970 aa4.89□□□□□ -1.63
PDE6A-201ENST00000255266 ZANQ9Y493 2812 aa4.89□□□□□ -1.63
PDE6A-201ENST00000255266 FBN2P35556 2912 aa4.89□□□□□ -1.63
PDE6A-201ENST00000255266 A8MU10 97 aa4.88□□□□□ -1.63
PDE6A-201ENST00000255266 DCHS2Q6V1P9 2916 aa4.88□□□□□ -1.63
PDE6A-201ENST00000255266 SVEP1Q4LDE5 3571 aa4.87□□□□□ -1.63
PDE6A-201ENST00000255266 ROMO1P60602 79 aa4.86□□□□□ -1.63
PDE6A-201ENST00000255266 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
PDE6A-201ENST00000255266 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
PDE6A-201ENST00000255266 CELSR2Q9HCU4 2923 aa4.83□□□□□ -1.64
PDE6A-201ENST00000255266 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
PDE6A-201ENST00000255266 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
PDE6A-201ENST00000255266 MXRA5Q9NR99 2828 aa4.81□□□□□ -1.64
PDE6A-201ENST00000255266 OTOGQ6ZRI0 2925 aa4.8□□□□□ -1.64
PDE6A-201ENST00000255266 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
PDE6A-201ENST00000255266 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
PDE6A-201ENST00000255266 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
PDE6A-201ENST00000255266 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
PDE6A-201ENST00000255266 TENM2Q9NT68 2774 aa4.77□□□□□ -1.65
PDE6A-201ENST00000255266 BSNQ9UPA5 3926 aa4.77□□□□□ -1.65
PDE6A-201ENST00000255266 NF1P21359 2839 aa4.75□□□□□ -1.65
PDE6A-201ENST00000255266 TNP1P09430 55 aa4.73□□□□□ -1.65
PDE6A-201ENST00000255266 CUBNO60494 3623 aa4.7□□□□□ -1.66
PDE6A-201ENST00000255266 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
PDE6A-201ENST00000255266 NBPF19A0A087WUL8 3843 aa4.69□□□□□ -1.66
PDE6A-201ENST00000255266 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
PDE6A-201ENST00000255266 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.67
PDE6A-201ENST00000255266 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
PDE6A-201ENST00000255266 TENM1Q9UKZ4 2725 aa4.59□□□□□ -1.67
PDE6A-201ENST00000255266 FBN1P35555 2871 aaKnown RBP4.59□□□□□ -1.67
PDE6A-201ENST00000255266 VPS13CQ709C8 3753 aa4.59□□□□□ -1.68
PDE6A-201ENST00000255266 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
PDE6A-201ENST00000255266 HUWE1Q7Z6Z7 4374 aaKnown RBP4.57□□□□□ -1.68
PDE6A-201ENST00000255266 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
PDE6A-201ENST00000255266 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
PDE6A-201ENST00000255266 FBN3Q75N90 2809 aa4.55□□□□□ -1.68
PDE6A-201ENST00000255266 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
PDE6A-201ENST00000255266 H0YAA0 97 aa4.54□□□□□ -1.68
PDE6A-201ENST00000255266 ZFHX3Q15911 3703 aa4.54□□□□□ -1.68
PDE6A-201ENST00000255266 VWFP04275 2813 aa4.49□□□□□ -1.69
PDE6A-201ENST00000255266 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.7
PDE6A-201ENST00000255266 P0C880 135 aa4.43□□□□□ -1.7
PDE6A-201ENST00000255266 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
PDE6A-201ENST00000255266 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
PDE6A-201ENST00000255266 AKAP9Q99996 3911 aa4.4□□□□□ -1.71
PDE6A-201ENST00000255266 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
PDE6A-201ENST00000255266 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
PDE6A-201ENST00000255266 TGP01266 2768 aa4.33□□□□□ -1.72
PDE6A-201ENST00000255266 DNAH11Q96DT5 4516 aa4.29□□□□□ -1.72
PDE6A-201ENST00000255266 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
PDE6A-201ENST00000255266 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
PDE6A-201ENST00000255266 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
PDE6A-201ENST00000255266 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
PDE6A-201ENST00000255266 ANK2Q01484 3957 aa4.21□□□□□ -1.74
PDE6A-201ENST00000255266 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
PDE6A-201ENST00000255266 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
PDE6A-201ENST00000255266 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
PDE6A-201ENST00000255266 DYNC2H1Q8NCM8 4307 aaKnown RBP4.16□□□□□ -1.74
PDE6A-201ENST00000255266 MEGF8Q7Z7M0 2845 aa4.16□□□□□ -1.74
PDE6A-201ENST00000255266 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
PDE6A-201ENST00000255266 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms