RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 NDUFB1O75438 58 aa6.86□□□□□ -1.31
LIN28A-201ENST00000254231 PKD1P98161 4303 aa6.86□□□□□ -1.31
LIN28A-201ENST00000254231 DSCR10P59022 87 aa6.85□□□□□ -1.31
LIN28A-201ENST00000254231 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
LIN28A-201ENST00000254231 LINC00208Q96KT6 92 aa6.85□□□□□ -1.31
LIN28A-201ENST00000254231 Q5XG85 94 aa6.83□□□□□ -1.32
LIN28A-201ENST00000254231 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
LIN28A-201ENST00000254231 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
LIN28A-201ENST00000254231 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
LIN28A-201ENST00000254231 NDUFC1O43677 76 aa6.81□□□□□ -1.32
LIN28A-201ENST00000254231 MP68P56378 58 aa6.81□□□□□ -1.32
LIN28A-201ENST00000254231 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
LIN28A-201ENST00000254231 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
LIN28A-201ENST00000254231 J3QL48 77 aa6.8□□□□□ -1.32
LIN28A-201ENST00000254231 ALMS1Q8TCU4 4167 aa6.79□□□□□ -1.32
LIN28A-201ENST00000254231 CASC2Q6XLA1 102 aa6.79□□□□□ -1.32
LIN28A-201ENST00000254231 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
LIN28A-201ENST00000254231 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.33
LIN28A-201ENST00000254231 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
LIN28A-201ENST00000254231 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
LIN28A-201ENST00000254231 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
LIN28A-201ENST00000254231 SPRR1BP22528 89 aa6.76□□□□□ -1.33
LIN28A-201ENST00000254231 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
LIN28A-201ENST00000254231 Q96NJ1 140 aa6.75□□□□□ -1.33
LIN28A-201ENST00000254231 OCR1Q9BZK8 76 aa6.74□□□□□ -1.33
LIN28A-201ENST00000254231 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
LIN28A-201ENST00000254231 PRO0628Q9UI54 55 aa6.73□□□□□ -1.33
LIN28A-201ENST00000254231 hDV103S1A0JD37 113 aa6.72□□□□□ -1.33
LIN28A-201ENST00000254231 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
LIN28A-201ENST00000254231 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
LIN28A-201ENST00000254231 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
LIN28A-201ENST00000254231 PRR15Q8IV56 129 aa6.71□□□□□ -1.33
LIN28A-201ENST00000254231 HSPG2P98160 4391 aa6.71□□□□□ -1.33
LIN28A-201ENST00000254231 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.34
LIN28A-201ENST00000254231 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
LIN28A-201ENST00000254231 Q8N1X5 172 aa6.71□□□□□ -1.34
LIN28A-201ENST00000254231 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
LIN28A-201ENST00000254231 H0Y9P7 68 aa6.7□□□□□ -1.34
LIN28A-201ENST00000254231 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
LIN28A-201ENST00000254231 A8MWP4 228 aa6.7□□□□□ -1.34
LIN28A-201ENST00000254231 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
LIN28A-201ENST00000254231 CHKB-CPT1BH3BT56 60 aa6.68□□□□□ -1.34
LIN28A-201ENST00000254231 A8MUN3 132 aa6.67□□□□□ -1.34
LIN28A-201ENST00000254231 LINC00313P59037 77 aa6.67□□□□□ -1.34
LIN28A-201ENST00000254231 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
LIN28A-201ENST00000254231 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
LIN28A-201ENST00000254231 HERC2O95714 4834 aa6.65□□□□□ -1.34
LIN28A-201ENST00000254231 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
LIN28A-201ENST00000254231 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
LIN28A-201ENST00000254231 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
LIN28A-201ENST00000254231 A6NED7 52 aa6.62□□□□□ -1.35
LIN28A-201ENST00000254231 SPINK1P00995 79 aa6.62□□□□□ -1.35
LIN28A-201ENST00000254231 V9GYY9 64 aa6.6□□□□□ -1.35
LIN28A-201ENST00000254231 HERC1Q15751 4861 aa6.6□□□□□ -1.35
LIN28A-201ENST00000254231 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
LIN28A-201ENST00000254231 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
LIN28A-201ENST00000254231 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
LIN28A-201ENST00000254231 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
LIN28A-201ENST00000254231 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
LIN28A-201ENST00000254231 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.36
LIN28A-201ENST00000254231 MUC2Q02817 5179 aa6.58□□□□□ -1.36
LIN28A-201ENST00000254231 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
LIN28A-201ENST00000254231 LRP2P98164 4655 aa6.57□□□□□ -1.36
LIN28A-201ENST00000254231 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
LIN28A-201ENST00000254231 IGLV7-46A0A075B6I9 117 aa6.56□□□□□ -1.36
LIN28A-201ENST00000254231 A8MU10 97 aa6.54□□□□□ -1.36
LIN28A-201ENST00000254231 Q5W150 140 aa6.53□□□□□ -1.36
LIN28A-201ENST00000254231 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
LIN28A-201ENST00000254231 A0A1B0GW54 56 aa6.53□□□□□ -1.36
LIN28A-201ENST00000254231 LPAP08519 4548 aa6.53□□□□□ -1.36
LIN28A-201ENST00000254231 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
LIN28A-201ENST00000254231 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
LIN28A-201ENST00000254231 COA5Q86WW8 74 aa6.49□□□□□ -1.37
LIN28A-201ENST00000254231 CD164Q04900 197 aa6.48□□□□□ -1.37
LIN28A-201ENST00000254231 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.38
LIN28A-201ENST00000254231 SEC61GP60059 68 aa6.44□□□□□ -1.38
LIN28A-201ENST00000254231 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
LIN28A-201ENST00000254231 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
LIN28A-201ENST00000254231 KRTAP10-8P60410 259 aa6.4□□□□□ -1.39
LIN28A-201ENST00000254231 Q1T7F1 81 aa6.4□□□□□ -1.39
LIN28A-201ENST00000254231 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
LIN28A-201ENST00000254231 Q5VV11 94 aa6.38□□□□□ -1.39
LIN28A-201ENST00000254231 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
LIN28A-201ENST00000254231 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
LIN28A-201ENST00000254231 C8orf87E5RJ46 101 aa6.38□□□□□ -1.39
LIN28A-201ENST00000254231 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
LIN28A-201ENST00000254231 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
LIN28A-201ENST00000254231 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
LIN28A-201ENST00000254231 C7orf65Q6ZTY9 151 aa6.34□□□□□ -1.39
LIN28A-201ENST00000254231 H3BPC8 53 aa6.33□□□□□ -1.4
LIN28A-201ENST00000254231 SPINK7P58062 85 aa6.32□□□□□ -1.4
LIN28A-201ENST00000254231 LOC101927531A0A1B0GV80 90 aa6.31□□□□□ -1.4
LIN28A-201ENST00000254231 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
LIN28A-201ENST00000254231 HRES1P13985 223 aa6.31□□□□□ -1.4
LIN28A-201ENST00000254231 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
LIN28A-201ENST00000254231 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
LIN28A-201ENST00000254231 LCA10Q71F78 164 aa6.27□□□□□ -1.41
LIN28A-201ENST00000254231 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
LIN28A-201ENST00000254231 XP32Q5T750 250 aa6.26□□□□□ -1.41
LIN28A-201ENST00000254231 A0A1B0GU69 56 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms