RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 A0A0U1RQV1 116 aa13.49□□□□□ -0.25
SYNGR3-201ENST00000248121 A0A1B0GVX0 72 aa13.49□□□□□ -0.25
SYNGR3-201ENST00000248121 TMEM258P61165 79 aa13.48□□□□□ -0.25
SYNGR3-201ENST00000248121 ASB16-AS1Q495Z4 193 aa13.48□□□□□ -0.25
SYNGR3-201ENST00000248121 IGHV6-1A0A0B4J1U7 121 aa13.46□□□□□ -0.26
SYNGR3-201ENST00000248121 C8orf17Q9NRJ1 99 aa13.46□□□□□ -0.26
SYNGR3-201ENST00000248121 hDV103S1A0JD37 113 aa13.44□□□□□ -0.26
SYNGR3-201ENST00000248121 NOTCH2NLQ7Z3S9 236 aa13.44□□□□□ -0.26
SYNGR3-201ENST00000248121 Q5XG85 94 aa13.43□□□□□ -0.26
SYNGR3-201ENST00000248121 TYMSOSQ8TAI1 123 aa13.41□□□□□ -0.26
SYNGR3-201ENST00000248121 LRP1Q07954 4544 aaKnown RBP13.4□□□□□ -0.27
SYNGR3-201ENST00000248121 C5orf47Q569G3 176 aa13.4□□□□□ -0.27
SYNGR3-201ENST00000248121 C1orf195Q5TG92 126 aa13.37□□□□□ -0.27
SYNGR3-201ENST00000248121 NDUFC1O43677 76 aa13.36□□□□□ -0.27
SYNGR3-201ENST00000248121 Q8N1X5 172 aa13.36□□□□□ -0.27
SYNGR3-201ENST00000248121 ZCCHC13Q8WW36 166 aaKnown RBP13.36□□□□□ -0.27
SYNGR3-201ENST00000248121 LIMD2Q9BT23 127 aa13.3□□□□□ -0.28
SYNGR3-201ENST00000248121 FAM236DA0A1B0GTK5 79 aa13.29□□□□□ -0.28
SYNGR3-201ENST00000248121 FAM236CP0DP71 79 aa13.29□□□□□ -0.28
SYNGR3-201ENST00000248121 FLG2Q5D862 2391 aaPredicted RBP13.29□□□□□ -0.28
SYNGR3-201ENST00000248121 MRPL34Q9BQ48 92 aaKnown RBP13.28□□□□□ -0.28
SYNGR3-201ENST00000248121 C4orf48Q5BLP8 95 aa13.28□□□□□ -0.28
SYNGR3-201ENST00000248121 SPINK1P00995 79 aa13.27□□□□□ -0.28
SYNGR3-201ENST00000248121 KRTAP4-5Q9BYR2 181 aa13.27□□□□□ -0.29
SYNGR3-201ENST00000248121 H0Y9P7 68 aa13.26□□□□□ -0.29
SYNGR3-201ENST00000248121 MP68P56378 58 aa13.25□□□□□ -0.29
SYNGR3-201ENST00000248121 LINC00304Q8N9R0 145 aa13.25□□□□□ -0.29
SYNGR3-201ENST00000248121 FAT3Q8TDW7 4589 aa13.25□□□□□ -0.29
SYNGR3-201ENST00000248121 TNXBP22105 4242 aa13.25□□□□□ -0.29
SYNGR3-201ENST00000248121 MYCBP2O75592 4640 aa13.23□□□□□ -0.29
SYNGR3-201ENST00000248121 LINC00208Q96KT6 92 aa13.23□□□□□ -0.29
SYNGR3-201ENST00000248121 TP53AIP1Q9HCN2 124 aa13.22□□□□□ -0.29
SYNGR3-201ENST00000248121 TRAV22A0A0B4J277 110 aa13.21□□□□□ -0.29
SYNGR3-201ENST00000248121 C8orf87E5RJ46 101 aa13.21□□□□□ -0.29
SYNGR3-201ENST00000248121 NDUFS5O43920 106 aa13.2□□□□□ -0.3
SYNGR3-201ENST00000248121 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
SYNGR3-201ENST00000248121 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
SYNGR3-201ENST00000248121 H3BPC8 53 aa13.17□□□□□ -0.3
SYNGR3-201ENST00000248121 RPS29P62273 56 aaKnown RBP13.17□□□□□ -0.3
SYNGR3-201ENST00000248121 OXTP01178 125 aa13.16□□□□□ -0.3
SYNGR3-201ENST00000248121 LINC00313P59037 77 aa13.16□□□□□ -0.3
SYNGR3-201ENST00000248121 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
SYNGR3-201ENST00000248121 KRTAP10-8P60410 259 aa13.14□□□□□ -0.31
SYNGR3-201ENST00000248121 C1orf64Q8NEQ6 169 aa13.14□□□□□ -0.31
SYNGR3-201ENST00000248121 ATP5EP56381 51 aaPredicted RBP13.11□□□□□ -0.31
SYNGR3-201ENST00000248121 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
SYNGR3-201ENST00000248121 Q5W150 140 aa13.08□□□□□ -0.32
SYNGR3-201ENST00000248121 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
SYNGR3-201ENST00000248121 Q8N9P0 234 aaPredicted RBP13.06□□□□□ -0.32
SYNGR3-201ENST00000248121 MT1HL1P0DM35 61 aa13.06□□□□□ -0.32
SYNGR3-201ENST00000248121 SERP1Q9Y6X1 66 aa13.06□□□□□ -0.32
SYNGR3-201ENST00000248121 HERC2O95714 4834 aa13.03□□□□□ -0.32
SYNGR3-201ENST00000248121 RETNLBQ9BQ08 111 aa13.02□□□□□ -0.33
SYNGR3-201ENST00000248121 ABCA13Q86UQ4 5058 aa13.02□□□□□ -0.33
SYNGR3-201ENST00000248121 PRR4Q16378 134 aa12.97□□□□□ -0.33
SYNGR3-201ENST00000248121 DMBT1Q9UGM3 2413 aaPredicted RBP12.96□□□□□ -0.34
SYNGR3-201ENST00000248121 PCOTHQ58A44 107 aa12.93□□□□□ -0.34
SYNGR3-201ENST00000248121 CYP4F30PQ9H0H9 118 aa12.93□□□□□ -0.34
SYNGR3-201ENST00000248121 SPANXA2-OT1Q8N9U9 137 aa12.93□□□□□ -0.34
SYNGR3-201ENST00000248121 LOC101927531A0A1B0GV80 90 aa12.88□□□□□ -0.35
SYNGR3-201ENST00000248121 IGLV7-46A0A075B6I9 117 aa12.84□□□□□ -0.35
SYNGR3-201ENST00000248121 C9orf92A6NGG3 77 aa12.79□□□□□ -0.36
SYNGR3-201ENST00000248121 FP248Q71RG6 208 aaPredicted RBP12.76□□□□□ -0.37
SYNGR3-201ENST00000248121 SMIM26A0A096LP01 95 aa12.76□□□□□ -0.37
SYNGR3-201ENST00000248121 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
SYNGR3-201ENST00000248121 C20orf166-AS1Q96NR2 134 aa12.69□□□□□ -0.38
SYNGR3-201ENST00000248121 A8MUU9 505 aa12.68□□□□□ -0.38
SYNGR3-201ENST00000248121 HRES1P13985 223 aa12.66□□□□□ -0.38
SYNGR3-201ENST00000248121 IGKV2D-30A0A075B6S6 120 aa12.63□□□□□ -0.39
SYNGR3-201ENST00000248121 C4orf26Q17RF5 130 aa12.63□□□□□ -0.39
SYNGR3-201ENST00000248121 PCLOQ9Y6V0 5065 aa12.61□□□□□ -0.39
SYNGR3-201ENST00000248121 J3QL48 77 aa12.61□□□□□ -0.39
SYNGR3-201ENST00000248121 COA5Q86WW8 74 aa12.6□□□□□ -0.39
SYNGR3-201ENST00000248121 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
SYNGR3-201ENST00000248121 Q75L30 129 aa12.51□□□□□ -0.41
SYNGR3-201ENST00000248121 C7orf65Q6ZTY9 151 aa12.5□□□□□ -0.41
SYNGR3-201ENST00000248121 DMAC1Q96GE9 116 aa12.5□□□□□ -0.41
SYNGR3-201ENST00000248121 LPAP08519 4548 aa12.5□□□□□ -0.41
SYNGR3-201ENST00000248121 Q1T7F1 81 aa12.46□□□□□ -0.41
SYNGR3-201ENST00000248121 XP32Q5T750 250 aa12.44□□□□□ -0.42
SYNGR3-201ENST00000248121 ACYP2P14621 99 aa12.42□□□□□ -0.42
SYNGR3-201ENST00000248121 TPRXLQ17RH7 258 aa12.35□□□□□ -0.43
SYNGR3-201ENST00000248121 SPINK7P58062 85 aa12.34□□□□□ -0.43
SYNGR3-201ENST00000248121 LRP2P98164 4655 aa12.34□□□□□ -0.43
SYNGR3-201ENST00000248121 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
SYNGR3-201ENST00000248121 HERC1Q15751 4861 aa12.3□□□□□ -0.44
SYNGR3-201ENST00000248121 V9GYY9 64 aa12.28□□□□□ -0.44
SYNGR3-201ENST00000248121 PSPHP1O15172 72 aa12.28□□□□□ -0.44
SYNGR3-201ENST00000248121 ATP11AUNQ6ZP68 121 aa12.28□□□□□ -0.44
SYNGR3-201ENST00000248121 A8MUN3 132 aa12.24□□□□□ -0.45
SYNGR3-201ENST00000248121 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
SYNGR3-201ENST00000248121 KRTAP3-1Q9BYR8 98 aa12.21□□□□□ -0.45
SYNGR3-201ENST00000248121 LINC01558Q9Y6Z2 57 aa12.18□□□□□ -0.46
SYNGR3-201ENST00000248121 Q5VV11 94 aa12.17□□□□□ -0.46
SYNGR3-201ENST00000248121 PRR15LQ9BU68 103 aa12.15□□□□□ -0.46
SYNGR3-201ENST00000248121 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
SYNGR3-201ENST00000248121 COX6B2Q6YFQ2 88 aa12.06□□□□□ -0.48
SYNGR3-201ENST00000248121 SVIPQ8NHG7 77 aa12.01□□□□□ -0.49
SYNGR3-201ENST00000248121 BRK1Q8WUW1 75 aa11.99□□□□□ -0.49
SYNGR3-201ENST00000248121 KRTAP4-1Q9BYQ7 146 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms