RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 LCE6AA0A183 80 aa9.38□□□□□ -0.91
LRRFIP1-201ENST00000244815 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
LRRFIP1-201ENST00000244815 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
LRRFIP1-201ENST00000244815 Q6ZSA8 131 aa9.36□□□□□ -0.91
LRRFIP1-201ENST00000244815 MXRA5Q9NR99 2828 aa9.35□□□□□ -0.91
LRRFIP1-201ENST00000244815 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
LRRFIP1-201ENST00000244815 TENM3Q9P273 2699 aa9.25□□□□□ -0.93
LRRFIP1-201ENST00000244815 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
LRRFIP1-201ENST00000244815 S4R3F8 94 aa9.22□□□□□ -0.93
LRRFIP1-201ENST00000244815 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
LRRFIP1-201ENST00000244815 WDFY3Q8IZQ1 3526 aa9.19□□□□□ -0.94
LRRFIP1-201ENST00000244815 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
LRRFIP1-201ENST00000244815 A8MU10 97 aa9.19□□□□□ -0.94
LRRFIP1-201ENST00000244815 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
LRRFIP1-201ENST00000244815 RELNP78509 3460 aa9.18□□□□□ -0.94
LRRFIP1-201ENST00000244815 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
LRRFIP1-201ENST00000244815 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
LRRFIP1-201ENST00000244815 LUZP6Q538Z0 58 aa9.16□□□□□ -0.94
LRRFIP1-201ENST00000244815 H1FX-AS1Q4G0G2 97 aa9.16□□□□□ -0.94
LRRFIP1-201ENST00000244815 CELSR1Q9NYQ6 3014 aa9.13□□□□□ -0.95
LRRFIP1-201ENST00000244815 H3BS24 57 aa9.13□□□□□ -0.95
LRRFIP1-201ENST00000244815 A6NN06 94 aa9.12□□□□□ -0.95
LRRFIP1-201ENST00000244815 R4GN34 69 aa9.09□□□□□ -0.95
LRRFIP1-201ENST00000244815 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
LRRFIP1-201ENST00000244815 ROMO1P60602 79 aa9.08□□□□□ -0.96
LRRFIP1-201ENST00000244815 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
LRRFIP1-201ENST00000244815 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
LRRFIP1-201ENST00000244815 Q5VSD8 79 aa9.05□□□□□ -0.96
LRRFIP1-201ENST00000244815 ASPMQ8IZT6 3477 aa9□□□□□ -0.97
LRRFIP1-201ENST00000244815 PDZD2O15018 2839 aa9□□□□□ -0.97
LRRFIP1-201ENST00000244815 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
LRRFIP1-201ENST00000244815 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
LRRFIP1-201ENST00000244815 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
LRRFIP1-201ENST00000244815 M0QZ58 72 aa8.93□□□□□ -0.98
LRRFIP1-201ENST00000244815 SEC61BP60468 96 aaKnown RBP8.93□□□□□ -0.98
LRRFIP1-201ENST00000244815 ZFHX4Q86UP3 3567 aa8.93□□□□□ -0.98
LRRFIP1-201ENST00000244815 LAMA5O15230 3695 aa8.92□□□□□ -0.98
LRRFIP1-201ENST00000244815 M0R2T5 61 aa8.89□□□□□ -0.99
LRRFIP1-201ENST00000244815 TGP01266 2768 aa8.84□□□□□ -0.99
LRRFIP1-201ENST00000244815 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
LRRFIP1-201ENST00000244815 FBN1P35555 2871 aaKnown RBP8.84□□□□□ -0.99
LRRFIP1-201ENST00000244815 VWFP04275 2813 aa8.81□□□□□ -1
LRRFIP1-201ENST00000244815 CSMD1Q96PZ7 3565 aa8.77□□□□□ -1.01
LRRFIP1-201ENST00000244815 TENM2Q9NT68 2774 aa8.76□□□□□ -1.01
LRRFIP1-201ENST00000244815 A8MUU9 505 aa8.73□□□□□ -1.01
LRRFIP1-201ENST00000244815 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
LRRFIP1-201ENST00000244815 DMDP11532 3685 aa8.71□□□□□ -1.01
LRRFIP1-201ENST00000244815 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
LRRFIP1-201ENST00000244815 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
LRRFIP1-201ENST00000244815 SMG1Q96Q15 3661 aaKnown RBP8.65□□□□□ -1.03
LRRFIP1-201ENST00000244815 CUBNO60494 3623 aa8.63□□□□□ -1.03
LRRFIP1-201ENST00000244815 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
LRRFIP1-201ENST00000244815 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
LRRFIP1-201ENST00000244815 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
LRRFIP1-201ENST00000244815 SVEP1Q4LDE5 3571 aa8.53□□□□□ -1.04
LRRFIP1-201ENST00000244815 NDUFAF8A1L188 74 aa8.52□□□□□ -1.04
LRRFIP1-201ENST00000244815 H0YAA0 97 aa8.51□□□□□ -1.05
LRRFIP1-201ENST00000244815 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
LRRFIP1-201ENST00000244815 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
LRRFIP1-201ENST00000244815 FBN3Q75N90 2809 aa8.43□□□□□ -1.06
LRRFIP1-201ENST00000244815 XP32Q5T750 250 aa8.4□□□□□ -1.06
LRRFIP1-201ENST00000244815 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
LRRFIP1-201ENST00000244815 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
LRRFIP1-201ENST00000244815 KRTAP21-3Q3LHN1 58 aa8.32□□□□□ -1.08
LRRFIP1-201ENST00000244815 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
LRRFIP1-201ENST00000244815 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
LRRFIP1-201ENST00000244815 TNP1P09430 55 aa8.26□□□□□ -1.09
LRRFIP1-201ENST00000244815 P0C880 135 aa8.25□□□□□ -1.09
LRRFIP1-201ENST00000244815 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
LRRFIP1-201ENST00000244815 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
LRRFIP1-201ENST00000244815 SPENQ96T58 3664 aaKnown RBP8.18□□□□□ -1.1
LRRFIP1-201ENST00000244815 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
LRRFIP1-201ENST00000244815 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
LRRFIP1-201ENST00000244815 TRRAPQ9Y4A5 3859 aa8.07□□□□□ -1.12
LRRFIP1-201ENST00000244815 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
LRRFIP1-201ENST00000244815 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
LRRFIP1-201ENST00000244815 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
LRRFIP1-201ENST00000244815 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
LRRFIP1-201ENST00000244815 ANK3Q12955 4377 aaKnown RBP7.86□□□□□ -1.15
LRRFIP1-201ENST00000244815 BSNQ9UPA5 3926 aa7.86□□□□□ -1.15
LRRFIP1-201ENST00000244815 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
LRRFIP1-201ENST00000244815 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
LRRFIP1-201ENST00000244815 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
LRRFIP1-201ENST00000244815 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
LRRFIP1-201ENST00000244815 VPS13CQ709C8 3753 aa7.66□□□□□ -1.18
LRRFIP1-201ENST00000244815 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.2
LRRFIP1-201ENST00000244815 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
LRRFIP1-201ENST00000244815 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
LRRFIP1-201ENST00000244815 CSMD3Q7Z407 3707 aa7.49□□□□□ -1.21
LRRFIP1-201ENST00000244815 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
LRRFIP1-201ENST00000244815 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
LRRFIP1-201ENST00000244815 ZNF469Q96JG9 3925 aaPredicted RBP7.38□□□□□ -1.23
LRRFIP1-201ENST00000244815 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
LRRFIP1-201ENST00000244815 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
LRRFIP1-201ENST00000244815 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
LRRFIP1-201ENST00000244815 KRTAP4-5Q9BYR2 181 aa7.1□□□□□ -1.27
LRRFIP1-201ENST00000244815 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
LRRFIP1-201ENST00000244815 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.28
LRRFIP1-201ENST00000244815 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
LRRFIP1-201ENST00000244815 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms