RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 KALRNO60229 2985 aa4.01□□□□□ -1.77
SSR1-201ENST00000244763 NF1P21359 2839 aa4□□□□□ -1.77
SSR1-201ENST00000244763 TPRXLQ17RH7 258 aa3.99□□□□□ -1.77
SSR1-201ENST00000244763 A8MU10 97 aa3.99□□□□□ -1.77
SSR1-201ENST00000244763 TENM1Q9UKZ4 2725 aa3.98□□□□□ -1.77
SSR1-201ENST00000244763 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
SSR1-201ENST00000244763 FRYLO94915 3013 aa3.97□□□□□ -1.77
SSR1-201ENST00000244763 VCANP13611 3396 aa3.96□□□□□ -1.78
SSR1-201ENST00000244763 DNAH14Q0VDD8 3507 aa3.96□□□□□ -1.78
SSR1-201ENST00000244763 TENM4Q6N022 2769 aa3.96□□□□□ -1.78
SSR1-201ENST00000244763 CRYBG3Q68DQ2 2970 aa3.96□□□□□ -1.78
SSR1-201ENST00000244763 LAMA1P25391 3075 aa3.95□□□□□ -1.78
SSR1-201ENST00000244763 A6NN06 94 aa3.95□□□□□ -1.78
SSR1-201ENST00000244763 XP32Q5T750 250 aa3.95□□□□□ -1.78
SSR1-201ENST00000244763 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
SSR1-201ENST00000244763 COL12A1Q99715 3063 aa3.95□□□□□ -1.78
SSR1-201ENST00000244763 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
SSR1-201ENST00000244763 DMXL2Q8TDJ6 3036 aa3.93□□□□□ -1.78
SSR1-201ENST00000244763 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
SSR1-201ENST00000244763 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
SSR1-201ENST00000244763 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
SSR1-201ENST00000244763 BOD1L1Q8NFC6 3051 aa3.9□□□□□ -1.78
SSR1-201ENST00000244763 SZT2Q5T011 3432 aa3.9□□□□□ -1.78
SSR1-201ENST00000244763 LRBAP50851 2863 aa3.9□□□□□ -1.79
SSR1-201ENST00000244763 USP34Q70CQ2 3546 aa3.9□□□□□ -1.79
SSR1-201ENST00000244763 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
SSR1-201ENST00000244763 SPEGQ15772 3267 aa3.89□□□□□ -1.79
SSR1-201ENST00000244763 ATMQ13315 3056 aa3.89□□□□□ -1.79
SSR1-201ENST00000244763 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
SSR1-201ENST00000244763 MXRA5Q9NR99 2828 aa3.88□□□□□ -1.79
SSR1-201ENST00000244763 CFAP47Q6ZTR5 3102 aa3.88□□□□□ -1.79
SSR1-201ENST00000244763 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
SSR1-201ENST00000244763 ZZEF1O43149 2961 aa3.87□□□□□ -1.79
SSR1-201ENST00000244763 TACC2O95359 2948 aa3.87□□□□□ -1.79
SSR1-201ENST00000244763 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
SSR1-201ENST00000244763 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
SSR1-201ENST00000244763 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
SSR1-201ENST00000244763 TNRC18O15417 2968 aaPredicted RBP3.82□□□□□ -1.8
SSR1-201ENST00000244763 NBEAQ8NFP9 2946 aa3.81□□□□□ -1.8
SSR1-201ENST00000244763 EYSQ5T1H1 3165 aa3.8□□□□□ -1.8
SSR1-201ENST00000244763 DCHS2Q6V1P9 2916 aa3.78□□□□□ -1.8
SSR1-201ENST00000244763 CELSR1Q9NYQ6 3014 aa3.78□□□□□ -1.8
SSR1-201ENST00000244763 TGP01266 2768 aa3.78□□□□□ -1.8
SSR1-201ENST00000244763 P0C880 135 aa3.76□□□□□ -1.81
SSR1-201ENST00000244763 H0YAA0 97 aa3.75□□□□□ -1.81
SSR1-201ENST00000244763 PDZD2O15018 2839 aa3.73□□□□□ -1.81
SSR1-201ENST00000244763 SRRM2Q9UQ35 2752 aaKnown RBP3.72□□□□□ -1.81
SSR1-201ENST00000244763 PKD1L1Q8TDX9 2849 aa3.71□□□□□ -1.82
SSR1-201ENST00000244763 TENM2Q9NT68 2774 aa3.71□□□□□ -1.82
SSR1-201ENST00000244763 DMXL1Q9Y485 3027 aa3.69□□□□□ -1.82
SSR1-201ENST00000244763 LOC400499M0QZD8 3231 aa3.69□□□□□ -1.82
SSR1-201ENST00000244763 SPTBN5Q9NRC6 3674 aaKnown RBP3.68□□□□□ -1.82
SSR1-201ENST00000244763 FBN2P35556 2912 aa3.66□□□□□ -1.82
SSR1-201ENST00000244763 VWFP04275 2813 aa3.65□□□□□ -1.82
SSR1-201ENST00000244763 HRNRQ86YZ3 2850 aaPredicted RBP3.63□□□□□ -1.83
SSR1-201ENST00000244763 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
SSR1-201ENST00000244763 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
SSR1-201ENST00000244763 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
SSR1-201ENST00000244763 WDFY3Q8IZQ1 3526 aa3.53□□□□□ -1.84
SSR1-201ENST00000244763 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
SSR1-201ENST00000244763 DCHS1Q96JQ0 3298 aa3.52□□□□□ -1.85
SSR1-201ENST00000244763 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
SSR1-201ENST00000244763 ASPMQ8IZT6 3477 aa3.51□□□□□ -1.85
SSR1-201ENST00000244763 ZFHX4Q86UP3 3567 aa3.5□□□□□ -1.85
SSR1-201ENST00000244763 RELNP78509 3460 aa3.49□□□□□ -1.85
SSR1-201ENST00000244763 FBN1P35555 2871 aaKnown RBP3.48□□□□□ -1.85
SSR1-201ENST00000244763 MYO15AQ9UKN7 3530 aa3.48□□□□□ -1.85
SSR1-201ENST00000244763 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
SSR1-201ENST00000244763 COL7A1Q02388 2944 aa3.44□□□□□ -1.86
SSR1-201ENST00000244763 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
SSR1-201ENST00000244763 ANK3Q12955 4377 aaKnown RBP3.41□□□□□ -1.86
SSR1-201ENST00000244763 ZFHX3Q15911 3703 aa3.41□□□□□ -1.86
SSR1-201ENST00000244763 LAMA5O15230 3695 aa3.35□□□□□ -1.87
SSR1-201ENST00000244763 MEGF8Q7Z7M0 2845 aa3.35□□□□□ -1.87
SSR1-201ENST00000244763 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
SSR1-201ENST00000244763 KRTAP10-6P60371 365 aaPredicted RBP3.35□□□□□ -1.87
SSR1-201ENST00000244763 CSMD1Q96PZ7 3565 aa3.34□□□□□ -1.87
SSR1-201ENST00000244763 INE1O15225 51 aa3.32□□□□□ -1.88
SSR1-201ENST00000244763 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
SSR1-201ENST00000244763 OTOGQ6ZRI0 2925 aa3.31□□□□□ -1.88
SSR1-201ENST00000244763 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
SSR1-201ENST00000244763 FBN3Q75N90 2809 aa3.3□□□□□ -1.88
SSR1-201ENST00000244763 KRTAP3-3Q9BYR6 98 aa3.26□□□□□ -1.89
SSR1-201ENST00000244763 KRTAP3-2Q9BYR7 98 aa3.26□□□□□ -1.89
SSR1-201ENST00000244763 TRRAPQ9Y4A5 3859 aa3.24□□□□□ -1.89
SSR1-201ENST00000244763 SPENQ96T58 3664 aaKnown RBP3.23□□□□□ -1.89
SSR1-201ENST00000244763 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
SSR1-201ENST00000244763 BSNQ9UPA5 3926 aa3.21□□□□□ -1.9
SSR1-201ENST00000244763 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
SSR1-201ENST00000244763 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
SSR1-201ENST00000244763 MUC3AQ02505 3323 aa3.19□□□□□ -1.9
SSR1-201ENST00000244763 CSMD2Q7Z408 3487 aa3.19□□□□□ -1.9
SSR1-201ENST00000244763 SMG1Q96Q15 3661 aaKnown RBP3.19□□□□□ -1.9
SSR1-201ENST00000244763 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
SSR1-201ENST00000244763 DMDP11532 3685 aa3.17□□□□□ -1.9
SSR1-201ENST00000244763 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
SSR1-201ENST00000244763 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.91
SSR1-201ENST00000244763 KRTAP4-5Q9BYR2 181 aa3.14□□□□□ -1.91
SSR1-201ENST00000244763 CUBNO60494 3623 aa3.11□□□□□ -1.91
SSR1-201ENST00000244763 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms