RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 A0A087WVE0 104 aa7.72□□□□□ -1.17
SLIRP-201ENST00000238688 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
SLIRP-201ENST00000238688 A0A087X002 238 aa7.71□□□□□ -1.18
SLIRP-201ENST00000238688 SPINK1P00995 79 aa7.7□□□□□ -1.18
SLIRP-201ENST00000238688 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
SLIRP-201ENST00000238688 PRR15Q8IV56 129 aa7.69□□□□□ -1.18
SLIRP-201ENST00000238688 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
SLIRP-201ENST00000238688 SERP2Q8N6R1 65 aa7.68□□□□□ -1.18
SLIRP-201ENST00000238688 Q96NJ1 140 aa7.68□□□□□ -1.18
SLIRP-201ENST00000238688 UQCRQO14949 82 aa7.67□□□□□ -1.18
SLIRP-201ENST00000238688 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
SLIRP-201ENST00000238688 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
SLIRP-201ENST00000238688 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
SLIRP-201ENST00000238688 K7EQZ3 153 aa7.66□□□□□ -1.18
SLIRP-201ENST00000238688 LRP2P98164 4655 aa7.66□□□□□ -1.18
SLIRP-201ENST00000238688 COX7CP15954 63 aa7.65□□□□□ -1.18
SLIRP-201ENST00000238688 HRCT1Q6UXD1 115 aa7.64□□□□□ -1.19
SLIRP-201ENST00000238688 Q8N9L7 120 aa7.63□□□□□ -1.19
SLIRP-201ENST00000238688 LINC00304Q8N9R0 145 aa7.63□□□□□ -1.19
SLIRP-201ENST00000238688 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
SLIRP-201ENST00000238688 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
SLIRP-201ENST00000238688 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
SLIRP-201ENST00000238688 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
SLIRP-201ENST00000238688 PRR26Q8N8Z3 221 aa7.58□□□□□ -1.2
SLIRP-201ENST00000238688 OCR1Q9BZK8 76 aa7.58□□□□□ -1.2
SLIRP-201ENST00000238688 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
SLIRP-201ENST00000238688 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
SLIRP-201ENST00000238688 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
SLIRP-201ENST00000238688 TP53AIP1Q9HCN2 124 aa7.55□□□□□ -1.2
SLIRP-201ENST00000238688 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
SLIRP-201ENST00000238688 TMEM254Q8TBM7 123 aa7.54□□□□□ -1.2
SLIRP-201ENST00000238688 C5orf47Q569G3 176 aa7.53□□□□□ -1.2
SLIRP-201ENST00000238688 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
SLIRP-201ENST00000238688 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
SLIRP-201ENST00000238688 H3BPC8 53 aa7.51□□□□□ -1.21
SLIRP-201ENST00000238688 NDUFC1O43677 76 aa7.51□□□□□ -1.21
SLIRP-201ENST00000238688 KLKP1Q107X0 134 aa7.51□□□□□ -1.21
SLIRP-201ENST00000238688 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
SLIRP-201ENST00000238688 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
SLIRP-201ENST00000238688 LPAP08519 4548 aa7.5□□□□□ -1.21
SLIRP-201ENST00000238688 MRPL34Q9BQ48 92 aaKnown RBP7.48□□□□□ -1.21
SLIRP-201ENST00000238688 MP68P56378 58 aa7.46□□□□□ -1.22
SLIRP-201ENST00000238688 LINC00313P59037 77 aa7.46□□□□□ -1.22
SLIRP-201ENST00000238688 C20orf197Q8N268 126 aa7.44□□□□□ -1.22
SLIRP-201ENST00000238688 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
SLIRP-201ENST00000238688 TRAV22A0A0B4J277 110 aa7.41□□□□□ -1.22
SLIRP-201ENST00000238688 TMEM258P61165 79 aa7.41□□□□□ -1.22
SLIRP-201ENST00000238688 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-201ENST00000238688 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-201ENST00000238688 ATP5EP56381 51 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-201ENST00000238688 H0Y9P7 68 aa7.36□□□□□ -1.23
SLIRP-201ENST00000238688 NDUFS5O43920 106 aa7.36□□□□□ -1.23
SLIRP-201ENST00000238688 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
SLIRP-201ENST00000238688 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
SLIRP-201ENST00000238688 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
SLIRP-201ENST00000238688 H7BZZ5 65 aa7.34□□□□□ -1.23
SLIRP-201ENST00000238688 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
SLIRP-201ENST00000238688 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
SLIRP-201ENST00000238688 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
SLIRP-201ENST00000238688 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
SLIRP-201ENST00000238688 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
SLIRP-201ENST00000238688 PRR4Q16378 134 aa7.27□□□□□ -1.25
SLIRP-201ENST00000238688 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
SLIRP-201ENST00000238688 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
SLIRP-201ENST00000238688 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
SLIRP-201ENST00000238688 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
SLIRP-201ENST00000238688 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
SLIRP-201ENST00000238688 A8MUU9 505 aa7.25□□□□□ -1.25
SLIRP-201ENST00000238688 MUC2Q02817 5179 aa7.24□□□□□ -1.25
SLIRP-201ENST00000238688 Q75L30 129 aa7.23□□□□□ -1.25
SLIRP-201ENST00000238688 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
SLIRP-201ENST00000238688 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
SLIRP-201ENST00000238688 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
SLIRP-201ENST00000238688 Q5W150 140 aa7.19□□□□□ -1.26
SLIRP-201ENST00000238688 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
SLIRP-201ENST00000238688 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
SLIRP-201ENST00000238688 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
SLIRP-201ENST00000238688 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
SLIRP-201ENST00000238688 TPRXLQ17RH7 258 aa7.15□□□□□ -1.26
SLIRP-201ENST00000238688 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
SLIRP-201ENST00000238688 C7orf65Q6ZTY9 151 aa7.13□□□□□ -1.27
SLIRP-201ENST00000238688 FAT4Q6V0I7 4981 aa7.1□□□□□ -1.27
SLIRP-201ENST00000238688 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.27
SLIRP-201ENST00000238688 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
SLIRP-201ENST00000238688 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
SLIRP-201ENST00000238688 XP32Q5T750 250 aa7.06□□□□□ -1.28
SLIRP-201ENST00000238688 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-201ENST00000238688 IGKV2D-30A0A075B6S6 120 aa7.04□□□□□ -1.28
SLIRP-201ENST00000238688 A8MUN3 132 aa7.03□□□□□ -1.28
SLIRP-201ENST00000238688 HRES1P13985 223 aa7.02□□□□□ -1.29
SLIRP-201ENST00000238688 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
SLIRP-201ENST00000238688 ACYP2P14621 99 aa7□□□□□ -1.29
SLIRP-201ENST00000238688 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
SLIRP-201ENST00000238688 SPINK7P58062 85 aa6.97□□□□□ -1.29
SLIRP-201ENST00000238688 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
SLIRP-201ENST00000238688 COA5Q86WW8 74 aa6.92□□□□□ -1.3
SLIRP-201ENST00000238688 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
SLIRP-201ENST00000238688 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
SLIRP-201ENST00000238688 V9GYY9 64 aa6.91□□□□□ -1.3
SLIRP-201ENST00000238688 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms