RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 NDUFS5O43920 106 aa6.47□□□□□ -1.37
TNFAIP3-201ENST00000237289 SEC61GP60059 68 aa6.47□□□□□ -1.37
TNFAIP3-201ENST00000237289 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
TNFAIP3-201ENST00000237289 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
TNFAIP3-201ENST00000237289 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.38
TNFAIP3-201ENST00000237289 Q6ZVQ6 151 aa6.45□□□□□ -1.38
TNFAIP3-201ENST00000237289 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
TNFAIP3-201ENST00000237289 NDUFC1O43677 76 aa6.44□□□□□ -1.38
TNFAIP3-201ENST00000237289 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
TNFAIP3-201ENST00000237289 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
TNFAIP3-201ENST00000237289 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
TNFAIP3-201ENST00000237289 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
TNFAIP3-201ENST00000237289 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
TNFAIP3-201ENST00000237289 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
TNFAIP3-201ENST00000237289 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
TNFAIP3-201ENST00000237289 A6NED7 52 aa6.41□□□□□ -1.38
TNFAIP3-201ENST00000237289 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
TNFAIP3-201ENST00000237289 PKD1P98161 4303 aa6.4□□□□□ -1.38
TNFAIP3-201ENST00000237289 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
TNFAIP3-201ENST00000237289 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.39
TNFAIP3-201ENST00000237289 LINC00313P59037 77 aa6.4□□□□□ -1.39
TNFAIP3-201ENST00000237289 PKHD1P08F94 4074 aa6.4□□□□□ -1.39
TNFAIP3-201ENST00000237289 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
TNFAIP3-201ENST00000237289 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
TNFAIP3-201ENST00000237289 Q96NJ1 140 aa6.37□□□□□ -1.39
TNFAIP3-201ENST00000237289 A8MWP4 228 aa6.36□□□□□ -1.39
TNFAIP3-201ENST00000237289 FAT1Q14517 4588 aa6.36□□□□□ -1.39
TNFAIP3-201ENST00000237289 EPPK1P58107 5090 aaKnown RBP6.36□□□□□ -1.39
TNFAIP3-201ENST00000237289 RYR1P21817 5038 aa6.36□□□□□ -1.39
TNFAIP3-201ENST00000237289 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
TNFAIP3-201ENST00000237289 Q5XG85 94 aa6.35□□□□□ -1.39
TNFAIP3-201ENST00000237289 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
TNFAIP3-201ENST00000237289 DNAH8Q96JB1 4490 aa6.35□□□□□ -1.39
TNFAIP3-201ENST00000237289 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 DSCR10P59022 87 aa6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 CXCL6P80162 114 aa6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
TNFAIP3-201ENST00000237289 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
TNFAIP3-201ENST00000237289 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
TNFAIP3-201ENST00000237289 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
TNFAIP3-201ENST00000237289 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
TNFAIP3-201ENST00000237289 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
TNFAIP3-201ENST00000237289 PRR15Q8IV56 129 aa6.31□□□□□ -1.4
TNFAIP3-201ENST00000237289 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
TNFAIP3-201ENST00000237289 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
TNFAIP3-201ENST00000237289 K7EQZ3 153 aa6.3□□□□□ -1.4
TNFAIP3-201ENST00000237289 HCG22E2RYF7 251 aa6.29□□□□□ -1.4
TNFAIP3-201ENST00000237289 C8orf17Q9NRJ1 99 aa6.29□□□□□ -1.4
TNFAIP3-201ENST00000237289 H7BZZ5 65 aa6.28□□□□□ -1.4
TNFAIP3-201ENST00000237289 PCOTHQ58A44 107 aa6.26□□□□□ -1.41
TNFAIP3-201ENST00000237289 HSPG2P98160 4391 aa6.26□□□□□ -1.41
TNFAIP3-201ENST00000237289 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
TNFAIP3-201ENST00000237289 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
TNFAIP3-201ENST00000237289 A8MUN3 132 aa6.23□□□□□ -1.41
TNFAIP3-201ENST00000237289 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
TNFAIP3-201ENST00000237289 KLKP1Q107X0 134 aa6.2□□□□□ -1.42
TNFAIP3-201ENST00000237289 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
TNFAIP3-201ENST00000237289 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
TNFAIP3-201ENST00000237289 H0Y9P7 68 aa6.17□□□□□ -1.42
TNFAIP3-201ENST00000237289 HERC2O95714 4834 aa6.15□□□□□ -1.42
TNFAIP3-201ENST00000237289 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
TNFAIP3-201ENST00000237289 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.43
TNFAIP3-201ENST00000237289 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
TNFAIP3-201ENST00000237289 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
TNFAIP3-201ENST00000237289 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
TNFAIP3-201ENST00000237289 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
TNFAIP3-201ENST00000237289 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
TNFAIP3-201ENST00000237289 XP32Q5T750 250 aa6.1□□□□□ -1.43
TNFAIP3-201ENST00000237289 Q75L30 129 aa6.09□□□□□ -1.43
TNFAIP3-201ENST00000237289 RPL37P61927 97 aaKnown RBP6.09□□□□□ -1.44
TNFAIP3-201ENST00000237289 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.44
TNFAIP3-201ENST00000237289 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
TNFAIP3-201ENST00000237289 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
TNFAIP3-201ENST00000237289 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
TNFAIP3-201ENST00000237289 A8MUU9 505 aa6.03□□□□□ -1.44
TNFAIP3-201ENST00000237289 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
TNFAIP3-201ENST00000237289 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
TNFAIP3-201ENST00000237289 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
TNFAIP3-201ENST00000237289 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.44
TNFAIP3-201ENST00000237289 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
TNFAIP3-201ENST00000237289 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
TNFAIP3-201ENST00000237289 SPINK7P58062 85 aa5.99□□□□□ -1.45
TNFAIP3-201ENST00000237289 COA5Q86WW8 74 aa5.99□□□□□ -1.45
TNFAIP3-201ENST00000237289 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
TNFAIP3-201ENST00000237289 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
TNFAIP3-201ENST00000237289 H3BPC8 53 aa5.97□□□□□ -1.45
TNFAIP3-201ENST00000237289 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
TNFAIP3-201ENST00000237289 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.46
TNFAIP3-201ENST00000237289 Q5W150 140 aa5.94□□□□□ -1.46
TNFAIP3-201ENST00000237289 A0A1B0GU69 56 aa5.93□□□□□ -1.46
TNFAIP3-201ENST00000237289 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
TNFAIP3-201ENST00000237289 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
TNFAIP3-201ENST00000237289 Q1T7F1 81 aa5.9□□□□□ -1.46
TNFAIP3-201ENST00000237289 K7ERS5 55 aa5.88□□□□□ -1.47
TNFAIP3-201ENST00000237289 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
TNFAIP3-201ENST00000237289 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
TNFAIP3-201ENST00000237289 M0R2T5 61 aa5.86□□□□□ -1.47
TNFAIP3-201ENST00000237289 LCA10Q71F78 164 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms