RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 K7EQZ3 153 aa10.63□□□□□ -0.71
SNX17-201ENST00000233575 IGKV4-1P06312 121 aa10.63□□□□□ -0.71
SNX17-201ENST00000233575 Q5XG85 94 aa10.62□□□□□ -0.71
SNX17-201ENST00000233575 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
SNX17-201ENST00000233575 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
SNX17-201ENST00000233575 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
SNX17-201ENST00000233575 LIMD2Q9BT23 127 aa10.6□□□□□ -0.71
SNX17-201ENST00000233575 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
SNX17-201ENST00000233575 A8MWP4 228 aa10.57□□□□□ -0.72
SNX17-201ENST00000233575 MT1HL1P0DM35 61 aa10.57□□□□□ -0.72
SNX17-201ENST00000233575 RPS29P62273 56 aaKnown RBP10.56□□□□□ -0.72
SNX17-201ENST00000233575 CYSTM1Q9H1C7 97 aa10.55□□□□□ -0.72
SNX17-201ENST00000233575 PRR15Q8IV56 129 aa10.53□□□□□ -0.72
SNX17-201ENST00000233575 OXTP01178 125 aa10.49□□□□□ -0.73
SNX17-201ENST00000233575 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
SNX17-201ENST00000233575 IGHV6-1A0A0B4J1U7 121 aa10.48□□□□□ -0.73
SNX17-201ENST00000233575 A0A1B0GVX0 72 aa10.48□□□□□ -0.73
SNX17-201ENST00000233575 NDUFB1O75438 58 aa10.48□□□□□ -0.73
SNX17-201ENST00000233575 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
SNX17-201ENST00000233575 NOTCH2NLQ7Z3S9 236 aa10.47□□□□□ -0.73
SNX17-201ENST00000233575 HCG22E2RYF7 251 aa10.45□□□□□ -0.74
SNX17-201ENST00000233575 C4orf26Q17RF5 130 aa10.45□□□□□ -0.74
SNX17-201ENST00000233575 WFDC13Q8IUB5 93 aa10.45□□□□□ -0.74
SNX17-201ENST00000233575 MMP24-AS1A0A0U1RRL7 71 aa10.43□□□□□ -0.74
SNX17-201ENST00000233575 KRTAP29-1A8MX34 341 aaPredicted RBP10.41□□□□□ -0.74
SNX17-201ENST00000233575 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
SNX17-201ENST00000233575 CASC2Q6XLA1 102 aa10.38□□□□□ -0.75
SNX17-201ENST00000233575 PCLOQ9Y6V0 5065 aa10.37□□□□□ -0.75
SNX17-201ENST00000233575 hDV103S1A0JD37 113 aa10.35□□□□□ -0.75
SNX17-201ENST00000233575 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
SNX17-201ENST00000233575 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
SNX17-201ENST00000233575 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
SNX17-201ENST00000233575 LINC00313P59037 77 aa10.33□□□□□ -0.76
SNX17-201ENST00000233575 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
SNX17-201ENST00000233575 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
SNX17-201ENST00000233575 OCR1Q9BZK8 76 aa10.3□□□□□ -0.76
SNX17-201ENST00000233575 PRO0628Q9UI54 55 aa10.3□□□□□ -0.76
SNX17-201ENST00000233575 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
SNX17-201ENST00000233575 KRTAP16-1A8MUX0 517 aa10.28□□□□□ -0.76
SNX17-201ENST00000233575 J3QL48 77 aa10.28□□□□□ -0.76
SNX17-201ENST00000233575 MRPL34Q9BQ48 92 aaKnown RBP10.28□□□□□ -0.76
SNX17-201ENST00000233575 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
SNX17-201ENST00000233575 H7BZZ5 65 aa10.27□□□□□ -0.77
SNX17-201ENST00000233575 TMEM254Q8TBM7 123 aa10.27□□□□□ -0.77
SNX17-201ENST00000233575 KLKP1Q107X0 134 aa10.25□□□□□ -0.77
SNX17-201ENST00000233575 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
SNX17-201ENST00000233575 NDUFS5O43920 106 aa10.22□□□□□ -0.77
SNX17-201ENST00000233575 FP248Q71RG6 208 aaPredicted RBP10.22□□□□□ -0.77
SNX17-201ENST00000233575 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
SNX17-201ENST00000233575 PRR4Q16378 134 aa10.19□□□□□ -0.78
SNX17-201ENST00000233575 NDUFC1O43677 76 aa10.17□□□□□ -0.78
SNX17-201ENST00000233575 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
SNX17-201ENST00000233575 ATP5EP56381 51 aaPredicted RBP10.17□□□□□ -0.78
SNX17-201ENST00000233575 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
SNX17-201ENST00000233575 LPAP08519 4548 aa10.12□□□□□ -0.79
SNX17-201ENST00000233575 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
SNX17-201ENST00000233575 Q5W150 140 aa10.1□□□□□ -0.79
SNX17-201ENST00000233575 SNURFQ9Y675 71 aa10.1□□□□□ -0.79
SNX17-201ENST00000233575 HERC1Q15751 4861 aa10.09□□□□□ -0.79
SNX17-201ENST00000233575 C20orf166-AS1Q96NR2 134 aa10.07□□□□□ -0.8
SNX17-201ENST00000233575 TRAV22A0A0B4J277 110 aa10.06□□□□□ -0.8
SNX17-201ENST00000233575 A0A0U1RQV1 116 aa10.06□□□□□ -0.8
SNX17-201ENST00000233575 A8MUU9 505 aa10.06□□□□□ -0.8
SNX17-201ENST00000233575 H0Y9P7 68 aa10.06□□□□□ -0.8
SNX17-201ENST00000233575 MP68P56378 58 aa10.04□□□□□ -0.8
SNX17-201ENST00000233575 XP32Q5T750 250 aa10.04□□□□□ -0.8
SNX17-201ENST00000233575 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
SNX17-201ENST00000233575 LRP2P98164 4655 aa10□□□□□ -0.81
SNX17-201ENST00000233575 LINC00208Q96KT6 92 aa10□□□□□ -0.81
SNX17-201ENST00000233575 Q75L30 129 aa9.99□□□□□ -0.81
SNX17-201ENST00000233575 ZCCHC13Q8WW36 166 aaKnown RBP9.98□□□□□ -0.81
SNX17-201ENST00000233575 BRK1Q8WUW1 75 aa9.96□□□□□ -0.81
SNX17-201ENST00000233575 H3BPC8 53 aa9.95□□□□□ -0.82
SNX17-201ENST00000233575 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
SNX17-201ENST00000233575 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
SNX17-201ENST00000233575 HMCN2Q8NDA2 5059 aa9.92□□□□□ -0.82
SNX17-201ENST00000233575 V9GYY9 64 aa9.92□□□□□ -0.82
SNX17-201ENST00000233575 SEC61GP60059 68 aa9.86□□□□□ -0.83
SNX17-201ENST00000233575 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
SNX17-201ENST00000233575 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
SNX17-201ENST00000233575 IGKV2-30P06310 120 aa9.85□□□□□ -0.83
SNX17-201ENST00000233575 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
SNX17-201ENST00000233575 LOC101927531A0A1B0GV80 90 aa9.84□□□□□ -0.83
SNX17-201ENST00000233575 CYP4F30PQ9H0H9 118 aa9.84□□□□□ -0.83
SNX17-201ENST00000233575 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
SNX17-201ENST00000233575 Q1T7F1 81 aa9.78□□□□□ -0.84
SNX17-201ENST00000233575 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
SNX17-201ENST00000233575 SPINK7P58062 85 aa9.75□□□□□ -0.85
SNX17-201ENST00000233575 PMAIP1Q13794 54 aa9.7□□□□□ -0.86
SNX17-201ENST00000233575 HRES1P13985 223 aa9.7□□□□□ -0.86
SNX17-201ENST00000233575 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
SNX17-201ENST00000233575 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
SNX17-201ENST00000233575 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
SNX17-201ENST00000233575 KRTAP4-1Q9BYQ7 146 aa9.58□□□□□ -0.88
SNX17-201ENST00000233575 MUC2Q02817 5179 aa9.54□□□□□ -0.88
SNX17-201ENST00000233575 PSPHP1O15172 72 aa9.54□□□□□ -0.88
SNX17-201ENST00000233575 UBR4Q5T4S7 5183 aa9.53□□□□□ -0.88
SNX17-201ENST00000233575 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
SNX17-201ENST00000233575 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
SNX17-201ENST00000233575 A8MUN3 132 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms